RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 MPP6Q9NZW5 540 aa8.04□□□□□ -1.12
CTHRC1-203ENST00000520337 SLC12A6Q9UHW9 1150 aa8.04□□□□□ -1.12
CTHRC1-203ENST00000520337 VANGL2Q9ULK5 521 aa8.04□□□□□ -1.12
CTHRC1-203ENST00000520337 HCFC2Q9Y5Z7 792 aa8.04□□□□□ -1.12
CTHRC1-203ENST00000520337 RAD54BQ9Y620 910 aa8.04□□□□□ -1.12
CTHRC1-203ENST00000520337 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.04□□□□□ -1.12
CTHRC1-203ENST00000520337 BRWD1Q9NSI6 2320 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 HACD1B0YJ81 288 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 KCNN4O15554 427 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 GCATO75600 419 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 CNTN5O94779 1100 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 IVLP07476 585 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 RHOP08100 348 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 MBL2P11226 248 aaPredicted RBP8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 VAV1P15498 845 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 PFKLP17858 780 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 TACR2P21452 398 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 VAMP1P23763 118 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 CDC25CP30307 473 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 CORO1AP31146 461 aaKnown RBP8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 ADCY8P40145 1251 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 NRIP1P48552 1158 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 HARS2P49590 506 aaKnown RBP8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 VPS41P49754 854 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 ST13P50502 369 aaKnown RBP8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 NTHL1P78549 312 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 SMAD3P84022 425 aaKnown RBP8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 PPIDQ08752 370 aaKnown RBP8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 GPS1Q13098 491 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 HLTFQ14527 1009 aaKnown RBP eCLIP8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 SLC5A9Q2M3M2 681 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 STXBP5Q5T5C0 1151 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 ACBD5Q5T8D3 534 aaPredicted RBP8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 RWDD4Q6NW29 188 aaKnown RBP8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 LETMD1Q6P1Q0 360 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 PDZD4Q76G19 769 aaPredicted RBP8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 BZW1Q7L1Q6 419 aaKnown RBP8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 DENND1CQ8IV53 801 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 CDKL3Q8IVW4 592 aaPredicted RBP8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 ELMOD1Q8N336 334 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 RTL3Q8N8U3 475 aaKnown RBP8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 MAB21L3Q8N8X9 362 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 ZSCAN18Q8TBC5 510 aaPredicted RBP8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 FBXO25Q8TCJ0 367 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 CCHCR1Q8TD31 782 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 TFB1MQ8WVM0 346 aaKnown RBP8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 MRPS31Q92665 395 aaKnown RBP8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 CAVIN3Q969G5 261 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 TIFAQ96CG3 184 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 SNF8Q96H20 258 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 FAM161BQ96MY7 647 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 LGMNQ99538 433 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 TXLNGYQ9BZA5 131 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 NACA2Q9H009 215 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 CATSPERBQ9H7T0 1116 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 SLC28A3Q9HAS3 691 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 ASAH2Q9NR71 780 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 SMPD4Q9NXE4 827 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 ZDHHC7Q9NXF8 308 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 ASIC3Q9UHC3 531 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 STOML2Q9UJZ1 356 aa8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 AGO1Q9UL18 857 aaKnown RBP8.03□□□□□ -1.12
CTHRC1-203ENST00000520337 TRAV19A0A0A6YYK7 116 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 CCDC195A0A1B0GUA6 201 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 CFAP69A5D8W1 941 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 C5orf60A6NFR6 353 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 DNALI1O14645 258 aaPredicted RBP8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 NCAM2O15394 837 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 FGF19O95750 216 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 LATS1O95835 1130 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 IFNB1P01574 187 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 IRF1P10914 325 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 OAS2P29728 719 aaKnown RBP8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 GARSP41250 739 aaKnown RBP8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 SLC11A2P49281 568 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 RGS19P49795 217 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 SGSHP51688 502 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 ITGA8P53708 1063 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 PLTPP55058 493 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 HNRNPH2P55795 449 aaKnown RBP8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 WASHC5Q12768 1159 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 SEPT6Q14141 434 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 TEAD2Q15562 447 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 TSNAXIP1Q2TAA8 658 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 P3H1Q32P28 736 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 MAP9Q49MG5 647 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 ADGRF1Q5T601 910 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 PRAMEF13Q5VWM6 474 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 IZUMO3Q5VZ72 239 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 HIBCHQ6NVY1 386 aaPredicted RBP8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 EMBQ6PCB8 327 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 RFWD3Q6PCD5 774 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 ARHGAP36Q6ZRI8 547 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 CHSY1Q86X52 802 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 FAM217AQ8IXS0 508 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 LGI2Q8N0V4 545 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 CFAP52Q8N1V2 620 aa8.02□□□□□ -1.13
CTHRC1-203ENST00000520337 UMODL1-AS1Q8N2C9 162 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms