RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 PAF1Q8N7H5 531 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 TEX45Q8NA69 505 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 MCPH1Q8NEM0 835 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 ENGASEQ8NFI3 743 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 CEP76Q8TAP6 659 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 GDPD5Q8WTR4 605 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 SLC35F5Q8WV83 523 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 INPP5DQ92835 1189 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 ZBTB10Q96DT7 871 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 FAM234AQ9H0X4 552 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 KRCC1Q9NPI7 259 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 SPATS2LQ9NUQ6 558 aaKnown RBP3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 PEMTQ9UBM1 199 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 PCDHGB5Q9Y5G0 923 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 SQORQ9Y6N5 450 aa3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 GPATCH8Q9UKJ3 1502 aaKnown RBP3.48□□□□□ -1.85
HMGB1P41-201ENST00000520234 GRIN2AQ12879 1464 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 MAGI1Q96QZ7 1491 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 CNTNAP2Q9UHC6 1331 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 NUP160Q12769 1436 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 GCC2Q8IWJ2 1684 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 RPS10-NUDT3A0A1W2PQS6 291 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 FAM90A10PA6NDY2 464 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 CYSRT1A8MQ03 144 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 OAZ2O95190 189 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 CRYABP02511 175 aaKnown RBP3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 CYP1A2P05177 515 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 URODP06132 367 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 IGKV2-30P06310 120 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 COX7A2P14406 83 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 ARSBP15848 533 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 ZNF8P17098 575 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 CTPS1P17812 591 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 CD72P21854 359 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 SCP2P22307 547 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 ELF1P32519 619 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 DDIT3P35638 169 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 LIFRP42702 1097 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 PGGT1BP53609 377 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 EFNB1P98172 346 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 PRICKLE4Q2TBC4 344 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 PLEKHO1Q53GL0 409 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 KLHL22Q53GT1 634 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 SLC9C2Q5TAH2 1124 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 DCAF12L2Q5VW00 463 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 ACAD10Q6JQN1 1059 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 PATL1Q86TB9 770 aaKnown RBP3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 HEATR4Q86WZ0 1026 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 ARMC8Q8IUR7 673 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 TCP11L2Q8N4U5 519 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 C7orf57Q8NEG2 295 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 TBC1D22AQ8WUA7 517 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 ATOH1Q92858 354 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 OTULINQ96BN8 352 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 RNF183Q96D59 192 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 GFM1Q96RP9 751 aaKnown RBP3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 PAIP1Q9H074 479 aaKnown RBP3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 SLC32A1Q9H598 525 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 VEZTQ9HBM0 779 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 PREBQ9HCU5 417 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 WDR6Q9NNW5 1121 aaKnown RBP3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 BABAM1Q9NWV8 329 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 MPP6Q9NZW5 540 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 CFDP1Q9UEE9 299 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 ARHGAP26Q9UNA1 814 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 ROCK2O75116 1388 aaKnown RBP3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 DNMT1P26358 1616 aaKnown RBP3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 KTN1Q86UP2 1357 aaKnown RBP3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 ANKRD30AQ9BXX3 1397 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 SYNJ2O15056 1496 aa3.47□□□□□ -1.85
HMGB1P41-201ENST00000520234 KIF7Q2M1P5 1343 aa3.46□□□□□ -1.85
HMGB1P41-201ENST00000520234 ZNF644Q9H582 1327 aaPredicted RBP3.46□□□□□ -1.85
HMGB1P41-201ENST00000520234 PTPRGP23470 1445 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 KIAA1107Q9UPP5 1409 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 ZNF608Q9ULD9 1512 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 PABPN1LA6NDY0 278 aaKnown RBP3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 MS4A18H0YCH9 400 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 H0YGN5 161 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 CLDN7O95471 211 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 TOMM40O96008 361 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 PCNAP12004 261 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 GNLYP22749 145 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 TTKP33981 857 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 PPP3CCP48454 512 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 CCT4P50991 539 aaKnown RBP3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 NR1H2P55055 460 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 P2RX3P56373 397 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 TMPRSS3P57727 454 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 UFM1P61960 85 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 PPATQ06203 517 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 FOXD4Q12950 439 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 PTP4A2Q12974 167 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 G3BP1Q13283 466 aaKnown RBP eCLIP3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 GPR18Q14330 331 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 DCAF6Q58WW2 860 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 ZNF667Q5HYK9 610 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 UBAP2Q5T6F2 1119 aaKnown RBP3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 SERTAD4-AS1Q5TG53 156 aa3.46□□□□□ -1.86
HMGB1P41-201ENST00000520234 OTUD1Q5VV17 481 aaPredicted RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms