RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 CPXM2Q8N436 756 aa27.2■■□□□ 1.94
COL13A1-212ENST00000520133 SPPL3Q8TCT6 385 aa27.2■■□□□ 1.94
COL13A1-212ENST00000520133 E2F7Q96AV8 911 aa27.2■■□□□ 1.94
COL13A1-212ENST00000520133 SCUBE2Q9NQ36 999 aa27.2■■□□□ 1.94
COL13A1-212ENST00000520133 SIRPGQ9P1W8 387 aa27.2■■□□□ 1.94
COL13A1-212ENST00000520133 CFAP97Q9P2B7 532 aa27.2■■□□□ 1.94
COL13A1-212ENST00000520133 MROH6A6NGR9 719 aa27.19■■□□□ 1.94
COL13A1-212ENST00000520133 CSPG5O95196 566 aa27.19■■□□□ 1.94
COL13A1-212ENST00000520133 NDST3O95803 873 aa27.19■■□□□ 1.94
COL13A1-212ENST00000520133 IL1BP01584 269 aa27.19■■□□□ 1.94
COL13A1-212ENST00000520133 SCNN1BP51168 640 aa27.19■■□□□ 1.94
COL13A1-212ENST00000520133 CLCN4P51793 760 aa27.19■■□□□ 1.94
COL13A1-212ENST00000520133 CYTH1Q15438 398 aa27.19■■□□□ 1.94
COL13A1-212ENST00000520133 PPM1JQ5JR12 505 aa27.19■■□□□ 1.94
COL13A1-212ENST00000520133 NEPROQ6NW34 567 aa27.19■■□□□ 1.94
COL13A1-212ENST00000520133 KIAA0408Q6ZU52 694 aa27.19■■□□□ 1.94
COL13A1-212ENST00000520133 MICAL1Q8TDZ2 1067 aa27.19■■□□□ 1.94
COL13A1-212ENST00000520133 SLC22A17Q8WUG5 538 aa27.19■■□□□ 1.94
COL13A1-212ENST00000520133 PEX13Q92968 403 aa27.19■■□□□ 1.94
COL13A1-212ENST00000520133 NOD2Q9HC29 1040 aa27.19■■□□□ 1.94
COL13A1-212ENST00000520133 VPS28Q9UK41 221 aa27.19■■□□□ 1.94
COL13A1-212ENST00000520133 ARIH1Q9Y4X5 557 aaPredicted RBP27.19■■□□□ 1.94
COL13A1-212ENST00000520133 HELZP42694 1942 aaKnown RBP27.19■■□□□ 1.94
COL13A1-212ENST00000520133 DOCK6Q96HP0 2047 aa27.18■■□□□ 1.94
COL13A1-212ENST00000520133 A0A096LPK6 155 aa27.18■■□□□ 1.94
COL13A1-212ENST00000520133 FGF19O95750 216 aa27.18■■□□□ 1.94
COL13A1-212ENST00000520133 TOP3BO95985 862 aaKnown RBP27.18■■□□□ 1.94
COL13A1-212ENST00000520133 AHSGP02765 367 aa27.18■■□□□ 1.94
COL13A1-212ENST00000520133 CR2P20023 1033 aa27.18■■□□□ 1.94
COL13A1-212ENST00000520133 ARF5P84085 180 aa27.18■■□□□ 1.94
COL13A1-212ENST00000520133 CTBP1Q13363 440 aa27.18■■□□□ 1.94
COL13A1-212ENST00000520133 GRM3Q14832 879 aa27.18■■□□□ 1.94
COL13A1-212ENST00000520133 FSCBQ5H9T9 825 aa27.18■■□□□ 1.94
COL13A1-212ENST00000520133 ZNF470Q6ECI4 717 aa27.18■■□□□ 1.94
COL13A1-212ENST00000520133 DENND6AQ8IWF6 608 aa27.18■■□□□ 1.94
COL13A1-212ENST00000520133 C2CD4AQ8NCU7 369 aaPredicted RBP27.18■■□□□ 1.94
COL13A1-212ENST00000520133 FEM1AQ9BSK4 669 aa27.18■■□□□ 1.94
COL13A1-212ENST00000520133 MECRQ9BV79 373 aa27.18■■□□□ 1.94
COL13A1-212ENST00000520133 SLC39A10Q9ULF5 831 aa27.18■■□□□ 1.94
COL13A1-212ENST00000520133 ANKRD36A6QL64 1941 aa27.18■■□□□ 1.94
COL13A1-212ENST00000520133 PLIN3O60664 434 aa27.18■■□□□ 1.94
COL13A1-212ENST00000520133 ABCG1P45844 678 aa27.18■■□□□ 1.94
COL13A1-212ENST00000520133 TMPRSS15P98073 1019 aa27.18■■□□□ 1.94
COL13A1-212ENST00000520133 CCDC153Q494R4 210 aa27.18■■□□□ 1.94
COL13A1-212ENST00000520133 INO80DQ53TQ3 878 aaPredicted RBP27.18■■□□□ 1.94
COL13A1-212ENST00000520133 TDRD5Q8NAT2 981 aaKnown RBP27.18■■□□□ 1.94
COL13A1-212ENST00000520133 DDI1Q8WTU0 396 aa27.18■■□□□ 1.94
COL13A1-212ENST00000520133 NUDCD1Q96RS6 583 aa27.18■■□□□ 1.94
COL13A1-212ENST00000520133 USH1CQ9Y6N9 552 aa27.18■■□□□ 1.94
COL13A1-212ENST00000520133 SLC7A4O43246 635 aa27.17■■□□□ 1.94
COL13A1-212ENST00000520133 F7P08709 466 aaPredicted RBP27.17■■□□□ 1.94
COL13A1-212ENST00000520133 GJA1P17302 382 aa27.17■■□□□ 1.94
COL13A1-212ENST00000520133 MZF1P28698 734 aaPredicted RBP27.17■■□□□ 1.94
COL13A1-212ENST00000520133 SLC1A2P43004 574 aa27.17■■□□□ 1.94
COL13A1-212ENST00000520133 MPPE1Q53F39 396 aa27.17■■□□□ 1.94
COL13A1-212ENST00000520133 LACTB2Q53H82 288 aaPredicted RBP27.17■■□□□ 1.94
COL13A1-212ENST00000520133 MPP7Q5T2T1 576 aa27.17■■□□□ 1.94
COL13A1-212ENST00000520133 C16orf46Q6P387 395 aa27.17■■□□□ 1.94
COL13A1-212ENST00000520133 MFN1Q8IWA4 741 aa27.17■■□□□ 1.94
COL13A1-212ENST00000520133 CAB39LQ9H9S4 337 aa27.17■■□□□ 1.94
COL13A1-212ENST00000520133 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP27.17■■□□□ 1.94
COL13A1-212ENST00000520133 TLK1Q9UKI8 766 aa27.17■■□□□ 1.94
COL13A1-212ENST00000520133 FBXO5Q9UKT4 447 aa27.17■■□□□ 1.94
COL13A1-212ENST00000520133 EMCNQ9ULC0 261 aa27.17■■□□□ 1.94
COL13A1-212ENST00000520133 LINC01553A4QN01 128 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 TGDSO95455 350 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 C2P06681 752 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 DNAJB1P25685 340 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 GABRB3P28472 473 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 ALDH3A1P30838 453 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 RGRP47804 291 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 CD151P48509 253 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 GALNT3Q14435 633 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 USP10Q14694 798 aaKnown RBP27.16■■□□□ 1.94
COL13A1-212ENST00000520133 LMNTD2Q8IXW0 634 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 GBP7Q8N8V2 638 aaPredicted RBP27.16■■□□□ 1.94
COL13A1-212ENST00000520133 OR13J1Q8NGT2 312 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 ZNF398Q8TD17 642 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 BRSK1Q8TDC3 778 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 BLOC1S5Q8TDH9 187 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 EXOC2Q96KP1 924 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 TRIB3Q96RU7 358 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 SLC46A2Q9BY10 475 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 TRIM55Q9BYV6 548 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 MCOLN1Q9GZU1 580 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 ACTR5Q9H9F9 607 aaPredicted RBP27.16■■□□□ 1.94
COL13A1-212ENST00000520133 GGT7Q9UJ14 662 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 ANKRD6Q9Y2G4 727 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 LDB2O43679 373 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 SNAP91O60641 907 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 ZMPSTE24O75844 475 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 TMCC1O94876 653 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 SYN1P17600 705 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 PRAMEP78395 509 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 IRX4P78413 519 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 MPP1Q00013 466 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 CHI3L2Q15782 390 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 TAF1BQ53T94 588 aaPredicted RBP27.16■■□□□ 1.94
COL13A1-212ENST00000520133 RAPH1Q70E73 1250 aa27.16■■□□□ 1.94
COL13A1-212ENST00000520133 BBS7Q8IWZ6 715 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms