RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 PRPF4O43172 522 aaKnown RBP eCLIP5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 SEC14L5O43304 696 aa5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 RB1P06400 928 aa5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 CLTBP09497 229 aa5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 KRT10P13645 584 aa5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 GABRB1P18505 474 aa5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 TFF2Q03403 129 aa5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 CFHR1Q03591 330 aa5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 ZNF268Q14587 947 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 NTRK2Q16620 822 aa5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 SOWAHCQ53LP3 525 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 KDELC2Q7Z4H8 507 aa5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 MRGPRGQ86SM5 289 aa5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 SERPINA11Q86U17 422 aa5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 LDLRAD3Q86YD5 345 aa5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 DHX40Q8IX18 779 aaKnown RBP5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 TEX11Q8IYF3 940 aa5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 ADGRF4Q8IZF3 695 aa5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 SLC25A41Q8N5S1 370 aa5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 MCPH1Q8NEM0 835 aa5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 SEMA6DQ8NFY4 1073 aa5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 RNF183Q96D59 192 aa5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 ARHGEF26Q96DR7 871 aa5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 BAG1Q99933 345 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 PDZD7Q9H5P4 517 aa5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 WDR6Q9NNW5 1121 aaKnown RBP5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 PDE7BQ9NP56 450 aa5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 SEL1LQ9UBV2 794 aa5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 SLC4A4Q9Y6R1 1079 aa5.54□□□□□ -1.52
HMGB1P46-201ENST00000520062 KIR2DS5A0A0G2JLQ3 304 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 FAM90A8PA6NJQ4 464 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 LINC01548A6NM66 108 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 KIR2DS3K7RE56 304 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 SNAP23O00161 211 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 SH2B2O14492 632 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 RAMP2O60895 175 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 SLC25A12O75746 678 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 C1QL1O75973 258 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 TOP3BO95985 862 aaKnown RBP5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 MMP3P08254 477 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 FAM90A13PP0C7W8 464 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 FAM90A24PP0C7X0 464 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 MYZAPP0CAP1 466 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 EDN2P20800 178 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 TACR2P21452 398 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 SAT1P21673 171 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 EPHB2P29323 1055 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 CIITAP33076 1130 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 F2RL1P55085 397 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 RUNX2Q13950 521 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 PSMD6Q15008 389 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 KRT24Q2M2I5 525 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 TCTN1Q2MV58 587 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 ASTE1Q2TB18 679 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 SLC9C1Q4G0N8 1177 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 FBXO42Q6P3S6 717 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 NKAIN3Q8N8D7 197 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 ATOH1Q92858 354 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 PABPC5Q96DU9 382 aaKnown RBP5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 TMEM68Q96MH6 324 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 NUF2Q9BZD4 464 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 KIF9Q9HAQ2 790 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 SPAG4Q9NPE6 437 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 PNRC2Q9NPJ4 139 aaKnown RBP5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 GIMAP4Q9NUV9 329 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 MRPL15Q9P015 296 aaKnown RBP5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 MARCH4Q9P2E8 410 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 CTNNAL1Q9UBT7 734 aa5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 AGO2Q9UKV8 859 aaKnown RBP5.53□□□□□ -1.52
HMGB1P46-201ENST00000520062 TYW5A2RUC4 315 aaKnown RBP5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 DDTLA6NHG4 134 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 HSPB2A8KAH6 182 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 BTBD18B2RXH4 712 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 KLRF2D3W0D1 207 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 TP73O15350 636 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 SLC25A17O43808 307 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 FZD7O75084 574 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 ENTPD3O75355 529 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 TMEM11P17152 192 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 MRPL12P52815 198 aaKnown RBP5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 LRMPQ12912 555 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 STIM1Q13586 685 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 DRAP1Q14919 205 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 RASA2Q15283 850 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 ADIPOQQ15848 244 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 HSPB2Q16082 182 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 PCGF3Q3KNV8 242 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 PLEKHO1Q53GL0 409 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 CXorf66Q5JRM2 361 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 C6orf141Q5SZD1 244 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 GARNL3Q5VVW2 1013 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 RPUSD3Q6P087 351 aaKnown RBP5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 ANKRD23Q86SG2 305 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 ARHGEF25Q86VW2 580 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 HACE1Q8IYU2 909 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 SCML4Q8N228 414 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 POC5Q8NA72 575 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 CMASQ8NFW8 434 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 SNAPC3Q92966 411 aa5.52□□□□□ -1.53
HMGB1P46-201ENST00000520062 ZNF333Q96JL9 665 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms