RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 BRAT1Q6PJG6 821 aa18.63■□□□□ 0.57
SREK1-207ENST00000520058 ARHGAP36Q6ZRI8 547 aa18.63■□□□□ 0.57
SREK1-207ENST00000520058 PARS2Q7L3T8 475 aaKnown RBP18.63■□□□□ 0.57
SREK1-207ENST00000520058 CPNE8Q86YQ8 564 aa18.63■□□□□ 0.57
SREK1-207ENST00000520058 NETO2Q8NC67 525 aa18.63■□□□□ 0.57
SREK1-207ENST00000520058 TSEN2Q8NCE0 465 aaKnown RBP18.63■□□□□ 0.57
SREK1-207ENST00000520058 FAM174AQ8TBP5 190 aa18.63■□□□□ 0.57
SREK1-207ENST00000520058 ASCC3Q8N3C0 2202 aaKnown RBP18.63■□□□□ 0.57
SREK1-207ENST00000520058 A0A1B0GVT2 93 aa18.62■□□□□ 0.57
SREK1-207ENST00000520058 CDX4O14627 284 aaPredicted RBP18.62■□□□□ 0.57
SREK1-207ENST00000520058 VILLO15195 856 aa18.62■□□□□ 0.57
SREK1-207ENST00000520058 MFSD11O43934 449 aa18.62■□□□□ 0.57
SREK1-207ENST00000520058 ZRANB2O95218 330 aaKnown RBP eCLIP18.62■□□□□ 0.574e-7■■■□□ 15.5
SREK1-207ENST00000520058 CES1P23141 567 aa18.62■□□□□ 0.57
SREK1-207ENST00000520058 CCNCP24863 283 aa18.62■□□□□ 0.57
SREK1-207ENST00000520058 AKT2P31751 481 aa18.62■□□□□ 0.57
SREK1-207ENST00000520058 CETN2P41208 172 aa18.62■□□□□ 0.57
SREK1-207ENST00000520058 ITKQ08881 620 aa18.62■□□□□ 0.57
SREK1-207ENST00000520058 OVGP1Q12889 678 aa18.62■□□□□ 0.57
SREK1-207ENST00000520058 SLC14A1Q13336 389 aa18.62■□□□□ 0.57
SREK1-207ENST00000520058 ERAP2Q6P179 960 aa18.62■□□□□ 0.57
SREK1-207ENST00000520058 ERMP1Q7Z2K6 904 aa18.62■□□□□ 0.57
SREK1-207ENST00000520058 RFX6Q8HWS3 928 aa18.62■□□□□ 0.57
SREK1-207ENST00000520058 RCOR2Q8IZ40 523 aa18.62■□□□□ 0.57
SREK1-207ENST00000520058 SYCE1Q8N0S2 351 aa18.62■□□□□ 0.57
SREK1-207ENST00000520058 CCNYQ8ND76 341 aa18.62■□□□□ 0.57
SREK1-207ENST00000520058 KIAA1524Q8TCG1 905 aa18.62■□□□□ 0.57
SREK1-207ENST00000520058 RNF25Q96BH1 459 aaPredicted RBP18.62■□□□□ 0.57
SREK1-207ENST00000520058 RBM41Q96IZ5 413 aaKnown RBP18.62■□□□□ 0.57
SREK1-207ENST00000520058 SLC32A1Q9H598 525 aa18.62■□□□□ 0.57
SREK1-207ENST00000520058 SCUBE2Q9NQ36 999 aa18.62■□□□□ 0.57
SREK1-207ENST00000520058 AMACRQ9UHK6 382 aa18.62■□□□□ 0.57
SREK1-207ENST00000520058 ANKRD6Q9Y2G4 727 aa18.62■□□□□ 0.57
SREK1-207ENST00000520058 FADS3Q9Y5Q0 445 aa18.62■□□□□ 0.57
SREK1-207ENST00000520058 LRRK1Q38SD2 2015 aa18.61■□□□□ 0.57
SREK1-207ENST00000520058 PPP1R12AO14974 1030 aaPredicted RBP18.61■□□□□ 0.57
SREK1-207ENST00000520058 PJA2O43164 708 aa18.61■□□□□ 0.57
SREK1-207ENST00000520058 HNRNPA2B1P22626 353 aaKnown RBP18.61■□□□□ 0.57
SREK1-207ENST00000520058 SUZ12Q15022 739 aaKnown RBP18.61■□□□□ 0.57
SREK1-207ENST00000520058 PDK1Q15118 436 aa18.61■□□□□ 0.57
SREK1-207ENST00000520058 IQCHQ86VS3 1027 aa18.61■□□□□ 0.57
SREK1-207ENST00000520058 CCDC50Q8IVM0 306 aa18.61■□□□□ 0.57
SREK1-207ENST00000520058 TP53INP2Q8IXH6 220 aa18.61■□□□□ 0.57
SREK1-207ENST00000520058 MFSD2AQ8NA29 543 aa18.61■□□□□ 0.57
SREK1-207ENST00000520058 ACRBPQ8NEB7 543 aa18.61■□□□□ 0.57
SREK1-207ENST00000520058 TPCN2Q8NHX9 752 aa18.61■□□□□ 0.57
SREK1-207ENST00000520058 CXorf40AQ8TE69 158 aa18.61■□□□□ 0.57
SREK1-207ENST00000520058 FATE1Q969F0 183 aa18.61■□□□□ 0.57
SREK1-207ENST00000520058 SLC6A18Q96N87 628 aa18.61■□□□□ 0.57
SREK1-207ENST00000520058 TSGA13Q96PP4 275 aa18.61■□□□□ 0.57
SREK1-207ENST00000520058 C1QTNF7Q9BXJ2 289 aa18.61■□□□□ 0.57
SREK1-207ENST00000520058 SLC17A9Q9BYT1 436 aa18.61■□□□□ 0.57
SREK1-207ENST00000520058 BRD8Q9H0E9 1235 aa18.61■□□□□ 0.57
SREK1-207ENST00000520058 GAREM1Q9H706 876 aa18.61■□□□□ 0.57
SREK1-207ENST00000520058 DNAAF2Q9NVR5 837 aaKnown RBP18.61■□□□□ 0.57
SREK1-207ENST00000520058 HYOU1Q9Y4L1 999 aa18.61■□□□□ 0.57
SREK1-207ENST00000520058 HEY1Q9Y5J3 304 aa18.61■□□□□ 0.57
SREK1-207ENST00000520058 KNL1Q8NG31 2342 aa18.6■□□□□ 0.57
SREK1-207ENST00000520058 MATN3O15232 486 aa18.6■□□□□ 0.57
SREK1-207ENST00000520058 SLC31A1O15431 190 aa18.6■□□□□ 0.57
SREK1-207ENST00000520058 ZNF883P0CG24 379 aa18.6■□□□□ 0.57
SREK1-207ENST00000520058 KRT10P13645 584 aa18.6■□□□□ 0.57
SREK1-207ENST00000520058 HLA-BQ31612 363 aa18.6■□□□□ 0.57
SREK1-207ENST00000520058 CAMK1DQ8IU85 385 aa18.6■□□□□ 0.57
SREK1-207ENST00000520058 CCDC13Q8IYE1 715 aa18.6■□□□□ 0.57
SREK1-207ENST00000520058 KATNAL2Q8IYT4 538 aa18.6■□□□□ 0.57
SREK1-207ENST00000520058 NDUFAF2Q8N183 169 aa18.6■□□□□ 0.57
SREK1-207ENST00000520058 OXR1Q8N573 874 aa18.6■□□□□ 0.57
SREK1-207ENST00000520058 PQLC3Q8N755 202 aa18.6■□□□□ 0.57
SREK1-207ENST00000520058 ANP32BQ92688 251 aaKnown RBP18.6■□□□□ 0.57
SREK1-207ENST00000520058 HDAC11Q96DB2 347 aa18.6■□□□□ 0.57
SREK1-207ENST00000520058 NUDCD1Q96RS6 583 aa18.6■□□□□ 0.57
SREK1-207ENST00000520058 ORAI3Q9BRQ5 295 aa18.6■□□□□ 0.57
SREK1-207ENST00000520058 TSGA10Q9BZW7 698 aa18.6■□□□□ 0.57
SREK1-207ENST00000520058 POLR1EQ9GZS1 481 aaKnown RBP18.6■□□□□ 0.57
SREK1-207ENST00000520058 FSCN3Q9NQT6 498 aa18.6■□□□□ 0.57
SREK1-207ENST00000520058 GDF3Q9NR23 364 aa18.6■□□□□ 0.57
SREK1-207ENST00000520058 TFR2Q9UP52 801 aa18.6■□□□□ 0.57
SREK1-207ENST00000520058 GOLGA6L3A6NEY3 463 aa18.59■□□□□ 0.57
SREK1-207ENST00000520058 UPK3BL1B0FP48 263 aa18.59■□□□□ 0.57
SREK1-207ENST00000520058 UPK3BL2E5RIL1 263 aa18.59■□□□□ 0.57
SREK1-207ENST00000520058 INSIG1O15503 277 aa18.59■□□□□ 0.57
SREK1-207ENST00000520058 PIGNO95427 931 aa18.59■□□□□ 0.57
SREK1-207ENST00000520058 CCNB1P14635 433 aa18.59■□□□□ 0.57
SREK1-207ENST00000520058 CA4P22748 312 aa18.59■□□□□ 0.57
SREK1-207ENST00000520058 NR2C2P49116 596 aa18.59■□□□□ 0.57
SREK1-207ENST00000520058 ARRB1P49407 418 aaPredicted RBP18.59■□□□□ 0.57
SREK1-207ENST00000520058 UGP2Q16851 508 aa18.59■□□□□ 0.57
SREK1-207ENST00000520058 KIF19Q2TAC6 998 aa18.59■□□□□ 0.57
SREK1-207ENST00000520058 ZNF284Q2VY69 593 aa18.59■□□□□ 0.57
SREK1-207ENST00000520058 TFDP3Q5H9I0 405 aa18.59■□□□□ 0.57
SREK1-207ENST00000520058 SLC9A4Q6AI14 798 aa18.59■□□□□ 0.57
SREK1-207ENST00000520058 TMEM139Q8IV31 216 aa18.59■□□□□ 0.57
SREK1-207ENST00000520058 EXD1Q8NHP7 514 aa18.59■□□□□ 0.57
SREK1-207ENST00000520058 KLHDC7BQ96G42 594 aa18.59■□□□□ 0.57
SREK1-207ENST00000520058 MGME1Q9BQP7 344 aa18.59■□□□□ 0.57
SREK1-207ENST00000520058 DMXL1Q9Y485 3027 aa18.59■□□□□ 0.57
SREK1-207ENST00000520058 TDRD6O60522 2096 aaKnown RBP18.59■□□□□ 0.57
SREK1-207ENST00000520058 TSPAN11A1L157 253 aa18.58■□□□□ 0.56
SREK1-207ENST00000520058 CCDC66A2RUB6 948 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms