RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 TOR1BO14657 336 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 CASC3O15234 703 aaKnown RBP11.94□□□□□ -0.5
POLB-208ENST00000520008 TMCC1O94876 653 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 RFC1P35251 1148 aaPredicted RBP11.94□□□□□ -0.5
POLB-208ENST00000520008 UCNP55089 124 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 TMPRSS3P57727 454 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 POLR2FP61218 127 aaKnown RBP11.94□□□□□ -0.5
POLB-208ENST00000520008 INO80DQ53TQ3 878 aaPredicted RBP11.94□□□□□ -0.5
POLB-208ENST00000520008 LRRC73Q5JTD7 316 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 GDPD4Q6W3E5 623 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 TRIM72Q6ZMU5 477 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 LEKR1Q6ZMV7 388 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 MACC1Q6ZN28 852 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 EFL1Q7Z2Z2 1120 aaKnown RBP11.94□□□□□ -0.5
POLB-208ENST00000520008 PHLDB2Q86SQ0 1253 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 PHF13Q86YI8 300 aaPredicted RBP11.94□□□□□ -0.5
POLB-208ENST00000520008 SLC35F3Q8IY50 421 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 PHACTR4Q8IZ21 702 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 ZNF843Q8N446 348 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 RYBPQ8N488 228 aaPredicted RBP11.94□□□□□ -0.5
POLB-208ENST00000520008 RTL3Q8N8U3 475 aaKnown RBP11.94□□□□□ -0.5
POLB-208ENST00000520008 C3orf20Q8ND61 904 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 TPCN2Q8NHX9 752 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 LMX1AQ8TE12 382 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 CASKIN2Q8WXE0 1202 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 GDAP1L1Q96MZ0 367 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 SLC46A1Q96NT5 459 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 IL12RB2Q99665 862 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 CLPBQ9H078 707 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 KLC2Q9H0B6 622 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 NUP62CLQ9H1M0 184 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 MBNL1Q9NR56 388 aaKnown RBP11.94□□□□□ -0.5
POLB-208ENST00000520008 THSD1Q9NS62 852 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 SPASTQ9UBP0 616 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 DKK3Q9UBP4 350 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 IPO11Q9UI26 975 aaKnown RBP11.94□□□□□ -0.5
POLB-208ENST00000520008 HPCAL4Q9UM19 191 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 SATB2Q9UPW6 733 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 SIK3Q9Y2K2 1263 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 DAAM1Q9Y4D1 1078 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 PCDHGA8Q9Y5G5 932 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 ASH1LQ9NR48 2969 aaKnown RBP11.94□□□□□ -0.5
POLB-208ENST00000520008 RP1P56715 2156 aa11.94□□□□□ -0.5
POLB-208ENST00000520008 TSPAN11A1L157 253 aa11.93□□□□□ -0.5
POLB-208ENST00000520008 PMS2P1A4D2B8 440 aa11.93□□□□□ -0.5
POLB-208ENST00000520008 WASH4PA8MWX3 477 aa11.93□□□□□ -0.5
POLB-208ENST00000520008 CDRT15L2A8MXV6 281 aa11.93□□□□□ -0.5
POLB-208ENST00000520008 NEMP1O14524 444 aa11.93□□□□□ -0.5
POLB-208ENST00000520008 TM7SF2O76062 418 aa11.93□□□□□ -0.5
POLB-208ENST00000520008 KRT3P12035 628 aa11.93□□□□□ -0.5
POLB-208ENST00000520008 ITIH2P19823 946 aa11.93□□□□□ -0.5
POLB-208ENST00000520008 THOP1P52888 689 aa11.93□□□□□ -0.5
POLB-208ENST00000520008 PTK2BQ14289 1009 aa11.93□□□□□ -0.5
POLB-208ENST00000520008 KRT31Q15323 416 aa11.93□□□□□ -0.5
POLB-208ENST00000520008 NR0B2Q15466 257 aa11.93□□□□□ -0.5
POLB-208ENST00000520008 PRRT3Q5FWE3 981 aa11.93□□□□□ -0.5
POLB-208ENST00000520008 C3orf38Q5JPI3 329 aa11.93□□□□□ -0.5
POLB-208ENST00000520008 PPP1R15BQ5SWA1 713 aa11.93□□□□□ -0.5
POLB-208ENST00000520008 WDR59Q6PJI9 974 aa11.93□□□□□ -0.5
POLB-208ENST00000520008 MON1BQ7L1V2 547 aa11.93□□□□□ -0.5
POLB-208ENST00000520008 PYROXD2Q8N2H3 581 aa11.93□□□□□ -0.5
POLB-208ENST00000520008 ENOX1Q8TC92 643 aaKnown RBP11.93□□□□□ -0.5
POLB-208ENST00000520008 KCNE4Q8WWG9 221 aa11.93□□□□□ -0.5
POLB-208ENST00000520008 WBP1Q96G27 269 aa11.93□□□□□ -0.5
POLB-208ENST00000520008 ATXN7L3BQ96GX2 97 aa11.93□□□□□ -0.5
POLB-208ENST00000520008 NAF1Q96HR8 494 aaKnown RBP11.93□□□□□ -0.5
POLB-208ENST00000520008 VCPIP1Q96JH7 1222 aa11.93□□□□□ -0.5
POLB-208ENST00000520008 EPAS1Q99814 870 aa11.93□□□□□ -0.5
POLB-208ENST00000520008 CPEB1Q9BZB8 566 aaKnown RBP11.93□□□□□ -0.5
POLB-208ENST00000520008 DPH1Q9BZG8 443 aa11.93□□□□□ -0.5
POLB-208ENST00000520008 CPNE5Q9HCH3 593 aa11.93□□□□□ -0.5
POLB-208ENST00000520008 NLRC4Q9NPP4 1024 aa11.93□□□□□ -0.5
POLB-208ENST00000520008 FAM207AQ9NSI2 230 aaPredicted RBP11.93□□□□□ -0.5
POLB-208ENST00000520008 LHX3Q9UBR4 397 aa11.93□□□□□ -0.5
POLB-208ENST00000520008 CPED1A4D0V7 1026 aa11.92□□□□□ -0.5
POLB-208ENST00000520008 NTN3O00634 580 aaPredicted RBP11.92□□□□□ -0.5
POLB-208ENST00000520008 YY2O15391 372 aa11.92□□□□□ -0.5
POLB-208ENST00000520008 CCP110O43303 1012 aa11.92□□□□□ -0.5
POLB-208ENST00000520008 BUB1O43683 1085 aa11.92□□□□□ -0.5
POLB-208ENST00000520008 MMP20O60882 483 aa11.92□□□□□ -0.5
POLB-208ENST00000520008 IGSF6O95976 241 aa11.92□□□□□ -0.5
POLB-208ENST00000520008 CELA2BP08218 269 aaPredicted RBP11.92□□□□□ -0.5
POLB-208ENST00000520008 PLA2G2AP14555 144 aa11.92□□□□□ -0.5
POLB-208ENST00000520008 TIMP2P16035 220 aa11.92□□□□□ -0.5
POLB-208ENST00000520008 TSHRP16473 764 aa11.92□□□□□ -0.5
POLB-208ENST00000520008 GPD1P21695 349 aa11.92□□□□□ -0.5
POLB-208ENST00000520008 EIF4A3P38919 411 aaKnown RBP11.92□□□□□ -0.5
POLB-208ENST00000520008 NSFP46459 744 aaKnown RBP11.92□□□□□ -0.5
POLB-208ENST00000520008 SUOXP51687 545 aa11.92□□□□□ -0.5
POLB-208ENST00000520008 AIF1P55008 147 aa11.92□□□□□ -0.5
POLB-208ENST00000520008 ADKP55263 362 aaKnown RBP11.92□□□□□ -0.5
POLB-208ENST00000520008 YBEYP58557 167 aaPredicted RBP11.92□□□□□ -0.5
POLB-208ENST00000520008 RHDQ02161 417 aa11.92□□□□□ -0.5
POLB-208ENST00000520008 SERINC3Q13530 473 aa11.92□□□□□ -0.5
POLB-208ENST00000520008 C1orf61Q13536 156 aa11.92□□□□□ -0.5
POLB-208ENST00000520008 AGERQ15109 404 aa11.92□□□□□ -0.5
POLB-208ENST00000520008 IRF4Q15306 451 aa11.92□□□□□ -0.5
POLB-208ENST00000520008 CLEC16AQ2KHT3 1053 aa11.92□□□□□ -0.5
POLB-208ENST00000520008 KLHL40Q2TBA0 621 aa11.92□□□□□ -0.5
POLB-208ENST00000520008 PARP15Q460N3 678 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms