RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 CACNA1GO43497 2377 aa25.64■■□□□ 1.7
VEGFA-220ENST00000519767 A0A1B0GTH6 734 aa25.63■■□□□ 1.69
VEGFA-220ENST00000519767 GIMD1P0DJR0 217 aa25.63■■□□□ 1.69
VEGFA-220ENST00000519767 TIMP2P16035 220 aa25.63■■□□□ 1.69
VEGFA-220ENST00000519767 PRKCIP41743 596 aa25.63■■□□□ 1.69
VEGFA-220ENST00000519767 ZNF135P52742 658 aaPredicted RBP25.63■■□□□ 1.69
VEGFA-220ENST00000519767 PFN3P60673 137 aa25.63■■□□□ 1.69
VEGFA-220ENST00000519767 PDE1CQ14123 709 aaPredicted RBP25.63■■□□□ 1.69
VEGFA-220ENST00000519767 CYTH1Q15438 398 aa25.63■■□□□ 1.69
VEGFA-220ENST00000519767 ZNF542PQ5EBM4 170 aa25.63■■□□□ 1.69
VEGFA-220ENST00000519767 DNAAF5Q86Y56 855 aa25.63■■□□□ 1.69
VEGFA-220ENST00000519767 CXorf40AQ8TE69 158 aa25.63■■□□□ 1.69
VEGFA-220ENST00000519767 BTN2A2Q8WVV5 523 aa25.63■■□□□ 1.69
VEGFA-220ENST00000519767 NCKIPSDQ9NZQ3 722 aa25.63■■□□□ 1.69
VEGFA-220ENST00000519767 GGT7Q9UJ14 662 aa25.63■■□□□ 1.69
VEGFA-220ENST00000519767 CLCA2Q9UQC9 943 aa25.63■■□□□ 1.69
VEGFA-220ENST00000519767 ITM2BQ9Y287 266 aa25.63■■□□□ 1.69
VEGFA-220ENST00000519767 ARHGAP42A6NI28 874 aa25.62■■□□□ 1.69
VEGFA-220ENST00000519767 EEF2KO00418 725 aaKnown RBP25.62■■□□□ 1.69
VEGFA-220ENST00000519767 SPINT1O43278 529 aa25.62■■□□□ 1.69
VEGFA-220ENST00000519767 DAPK3O43293 454 aa25.62■■□□□ 1.69
VEGFA-220ENST00000519767 PRAMEF11O60813 436 aa25.62■■□□□ 1.69
VEGFA-220ENST00000519767 TM7SF2O76062 418 aa25.62■■□□□ 1.69
VEGFA-220ENST00000519767 XPAP23025 273 aaPredicted RBP25.62■■□□□ 1.69
VEGFA-220ENST00000519767 YPEL5P62699 121 aa25.62■■□□□ 1.69
VEGFA-220ENST00000519767 KLHL30Q0D2K2 578 aa25.62■■□□□ 1.69
VEGFA-220ENST00000519767 ELP6Q0PNE2 266 aa25.62■■□□□ 1.69
VEGFA-220ENST00000519767 RTP5Q14D33 572 aa25.62■■□□□ 1.69
VEGFA-220ENST00000519767 C19orf48Q6RUI8 117 aa25.62■■□□□ 1.69
VEGFA-220ENST00000519767 ZNF571Q7Z3V5 609 aaPredicted RBP25.62■■□□□ 1.69
VEGFA-220ENST00000519767 TRIM11Q96F44 468 aa25.62■■□□□ 1.69
VEGFA-220ENST00000519767 ZNF641Q96N77 438 aaPredicted RBP25.62■■□□□ 1.69
VEGFA-220ENST00000519767 DHX35Q9H5Z1 703 aaKnown RBP25.62■■□□□ 1.69
VEGFA-220ENST00000519767 K7ESM1 405 aa25.61■■□□□ 1.69
VEGFA-220ENST00000519767 PRPSAP2O60256 369 aa25.61■■□□□ 1.69
VEGFA-220ENST00000519767 MMP20O60882 483 aa25.61■■□□□ 1.69
VEGFA-220ENST00000519767 GP1BAP07359 652 aa25.61■■□□□ 1.69
VEGFA-220ENST00000519767 MYBL1P10243 752 aa25.61■■□□□ 1.69
VEGFA-220ENST00000519767 HCAR3P49019 387 aa25.61■■□□□ 1.69
VEGFA-220ENST00000519767 THOP1P52888 689 aa25.61■■□□□ 1.69
VEGFA-220ENST00000519767 CLDN6P56747 220 aa25.61■■□□□ 1.69
VEGFA-220ENST00000519767 INSM1Q01101 510 aaPredicted RBP25.61■■□□□ 1.69
VEGFA-220ENST00000519767 NR1I3Q14994 352 aa25.61■■□□□ 1.69
VEGFA-220ENST00000519767 DCBLD1Q8N8Z6 715 aa25.61■■□□□ 1.69
VEGFA-220ENST00000519767 APOLD1Q96LR9 279 aa25.61■■□□□ 1.69
VEGFA-220ENST00000519767 NAP1L5Q96NT1 182 aaPredicted RBP25.61■■□□□ 1.69
VEGFA-220ENST00000519767 SUV39H2Q9H5I1 410 aa25.61■■□□□ 1.69
VEGFA-220ENST00000519767 MRPL47Q9HD33 250 aaKnown RBP25.61■■□□□ 1.69
VEGFA-220ENST00000519767 LHX3Q9UBR4 397 aa25.61■■□□□ 1.69
VEGFA-220ENST00000519767 PCSK1NQ9UHG2 260 aa25.61■■□□□ 1.69
VEGFA-220ENST00000519767 AK5Q9Y6K8 562 aa25.61■■□□□ 1.69
VEGFA-220ENST00000519767 SCINQ9Y6U3 715 aa25.61■■□□□ 1.69
VEGFA-220ENST00000519767 ATRXP46100 2492 aa25.61■■□□□ 1.69
VEGFA-220ENST00000519767 LAMA5O15230 3695 aa25.61■■□□□ 1.69
VEGFA-220ENST00000519767 A0A087WV48 116 aa25.6■■□□□ 1.69
VEGFA-220ENST00000519767 SERPINC1P01008 464 aa25.6■■□□□ 1.69
VEGFA-220ENST00000519767 JUNDP17535 347 aa25.6■■□□□ 1.69
VEGFA-220ENST00000519767 CSNK1DP48730 415 aa25.6■■□□□ 1.69
VEGFA-220ENST00000519767 PAPOLAP51003 745 aaKnown RBP25.6■■□□□ 1.69
VEGFA-220ENST00000519767 TMEM52BQ4KMG9 183 aa25.6■■□□□ 1.69
VEGFA-220ENST00000519767 CAVIN1Q6NZI2 390 aaKnown RBP25.6■■□□□ 1.69
VEGFA-220ENST00000519767 ARFGAP1Q8N6T3 406 aa25.6■■□□□ 1.69
VEGFA-220ENST00000519767 ZNF548Q8NEK5 533 aaPredicted RBP25.6■■□□□ 1.69
VEGFA-220ENST00000519767 HNRNPLLQ8WVV9 542 aaKnown RBP25.6■■□□□ 1.69
VEGFA-220ENST00000519767 TUBGCP5Q96RT8 1024 aa25.6■■□□□ 1.69
VEGFA-220ENST00000519767 PDFQ9HBH1 243 aa25.6■■□□□ 1.69
VEGFA-220ENST00000519767 GPATCH2LQ9NWQ4 482 aa25.6■■□□□ 1.69
VEGFA-220ENST00000519767 CNOT8Q9UFF9 292 aaKnown RBP25.6■■□□□ 1.69
VEGFA-220ENST00000519767 J3KR12 359 aa25.59■■□□□ 1.69
VEGFA-220ENST00000519767 DDX3XO00571 662 aaKnown RBP eCLIP25.59■■□□□ 1.697e-12■■■■□ 20
VEGFA-220ENST00000519767 TPP1O14773 563 aa25.59■■□□□ 1.69
VEGFA-220ENST00000519767 AQP9O43315 295 aa25.59■■□□□ 1.69
VEGFA-220ENST00000519767 MT-CO3P00414 261 aa25.59■■□□□ 1.69
VEGFA-220ENST00000519767 ACAP1Q15027 740 aa25.59■■□□□ 1.69
VEGFA-220ENST00000519767 UGP2Q16851 508 aa25.59■■□□□ 1.69
VEGFA-220ENST00000519767 FIGNQ5HY92 759 aa25.59■■□□□ 1.69
VEGFA-220ENST00000519767 ZCCHC8Q6NZY4 707 aaKnown RBP25.59■■□□□ 1.69
VEGFA-220ENST00000519767 BRAT1Q6PJG6 821 aa25.59■■□□□ 1.69
VEGFA-220ENST00000519767 RFX8Q6ZV50 586 aa25.59■■□□□ 1.69
VEGFA-220ENST00000519767 VPS36Q86VN1 386 aa25.59■■□□□ 1.69
VEGFA-220ENST00000519767 NETO2Q8NC67 525 aa25.59■■□□□ 1.69
VEGFA-220ENST00000519767 SLC39A8Q9C0K1 460 aa25.59■■□□□ 1.69
VEGFA-220ENST00000519767 SPASTQ9UBP0 616 aa25.59■■□□□ 1.69
VEGFA-220ENST00000519767 SALL4Q9UJQ4 1053 aa25.59■■□□□ 1.69
VEGFA-220ENST00000519767 IGSF10Q6WRI0 2623 aa25.58■■□□□ 1.69
VEGFA-220ENST00000519767 TMEM110-MUSTN1A8MSY1 372 aa25.58■■□□□ 1.69
VEGFA-220ENST00000519767 INSIG1O15503 277 aa25.58■■□□□ 1.69
VEGFA-220ENST00000519767 ATMINO43313 823 aaPredicted RBP25.58■■□□□ 1.69
VEGFA-220ENST00000519767 OPA1O60313 960 aa25.58■■□□□ 1.69
VEGFA-220ENST00000519767 MIPP30301 263 aa25.58■■□□□ 1.69
VEGFA-220ENST00000519767 IQCB1Q15051 598 aa25.58■■□□□ 1.69
VEGFA-220ENST00000519767 CA9Q16790 459 aa25.58■■□□□ 1.69
VEGFA-220ENST00000519767 COL28A1Q2UY09 1125 aa25.58■■□□□ 1.69
VEGFA-220ENST00000519767 CFAP58Q5T655 872 aa25.58■■□□□ 1.69
VEGFA-220ENST00000519767 LZTR1Q8N653 840 aa25.58■■□□□ 1.69
VEGFA-220ENST00000519767 CELF6Q96J87 481 aaKnown RBP25.58■■□□□ 1.69
VEGFA-220ENST00000519767 TBATAQ96M53 351 aa25.58■■□□□ 1.69
VEGFA-220ENST00000519767 SNRNP25Q9BV90 132 aaKnown RBP25.58■■□□□ 1.69
VEGFA-220ENST00000519767 ABCG4Q9H172 646 aa25.58■■□□□ 1.69
VEGFA-220ENST00000519767 KLF15Q9UIH9 416 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms