RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 ARSEP51690 589 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 ZNF135P52742 658 aaPredicted RBP9.46□□□□□ -0.9
HDAC3-215ENST00000519474 NSUN2Q08J23 767 aaKnown RBP eCLIP9.46□□□□□ -0.9
HDAC3-215ENST00000519474 DPYSQ14117 519 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 DPYSL2Q16555 572 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 KIAA1161Q6NSJ0 714 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 GCNT7Q6ZNI0 430 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 Q6ZSR6 202 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 ABI3BPQ7Z7G0 1075 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 SRLQ86TD4 932 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 VPS36Q86VN1 386 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 CPNE8Q86YQ8 564 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 CAMK1DQ8IU85 385 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 LZTR1Q8N653 840 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 EID2Q8N6I1 236 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 NPWQ8N729 165 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 NIPA2Q8N8Q9 360 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 TSEN2Q8NCE0 465 aaKnown RBP9.46□□□□□ -0.9
HDAC3-215ENST00000519474 FAM71BQ8TC56 605 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 HSPH1Q92598 858 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 CENPTQ96BT3 561 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 GDAP1L1Q96MZ0 367 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 OSBPL1AQ9BXW6 950 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 TSPY26PQ9H489 355 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 KLHL11Q9NVR0 708 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 ITM2BQ9Y287 266 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 NEUROG3Q9Y4Z2 214 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 NYNRINQ9P2P1 1898 aaKnown RBP9.46□□□□□ -0.9
HDAC3-215ENST00000519474 LAMA1P25391 3075 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 NCOR2Q9Y618 2525 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 GOLGA8CPA6NN73 597 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 MYO1FO00160 1098 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 DFFAO00273 331 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 MUSKO15146 869 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 CBFA2T2O43439 604 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 PALMO75781 387 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 LDOC1O95751 146 aaPredicted RBP9.45□□□□□ -0.9
HDAC3-215ENST00000519474 IGSF6O95976 241 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 PEX11BO96011 259 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 GIMD1P0DJR0 217 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 EPHA8P29322 1005 aaPredicted RBP9.45□□□□□ -0.9
HDAC3-215ENST00000519474 ARRB1P49407 418 aaPredicted RBP9.45□□□□□ -0.9
HDAC3-215ENST00000519474 ADKP55263 362 aaKnown RBP9.45□□□□□ -0.9
HDAC3-215ENST00000519474 SLC25A11Q02978 314 aaKnown RBP9.45□□□□□ -0.9
HDAC3-215ENST00000519474 IL10RBQ08334 325 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 DMTNQ08495 405 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 MMRN1Q13201 1228 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 SGCGQ13326 291 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 SLC18A3Q16572 532 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 UGP2Q16851 508 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 SMTNL2Q2TAL5 461 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 TMEM52BQ4KMG9 183 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 LRRC73Q5JTD7 316 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 SPECC1LQ69YQ0 1117 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 CCNI2Q6ZMN8 369 aaPredicted RBP9.45□□□□□ -0.9
HDAC3-215ENST00000519474 KDM7AQ6ZMT4 941 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 TMPRSS7Q7RTY8 843 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 MARCH9Q86YJ5 346 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 DCP2Q8IU60 420 aaKnown RBP9.45□□□□□ -0.9
HDAC3-215ENST00000519474 VSTM4Q8IW00 320 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 OXR1Q8N573 874 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 KDF1Q8NAX2 398 aaPredicted RBP9.45□□□□□ -0.9
HDAC3-215ENST00000519474 RNF214Q8ND24 703 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 FAM174AQ8TBP5 190 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 TEKT4Q8WW24 435 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 TSC1Q92574 1164 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 EXOC2Q96KP1 924 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 ZNF641Q96N77 438 aaPredicted RBP9.45□□□□□ -0.9
HDAC3-215ENST00000519474 CSPG4P5Q96PW8 444 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 DNAJC7Q99615 494 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 PACSIN1Q9BY11 444 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 PCDH18Q9HCL0 1135 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 GPR27Q9NS67 375 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 IPO11Q9UI26 975 aaKnown RBP9.45□□□□□ -0.9
HDAC3-215ENST00000519474 ANAPC7Q9UJX3 599 aa9.45□□□□□ -0.9
HDAC3-215ENST00000519474 PLXNB3Q9ULL4 1909 aa9.44□□□□□ -0.9
HDAC3-215ENST00000519474 ARID1BQ8NFD5 2236 aaPredicted RBP9.44□□□□□ -0.9
HDAC3-215ENST00000519474 SSU72P8A0A1W2PR75 194 aa9.44□□□□□ -0.9
HDAC3-215ENST00000519474 TSPAN11A1L157 253 aa9.44□□□□□ -0.9
HDAC3-215ENST00000519474 TTC24A2A3L6 582 aaPredicted RBP9.44□□□□□ -0.9
HDAC3-215ENST00000519474 H3BRJ5 948 aa9.44□□□□□ -0.9
HDAC3-215ENST00000519474 TRIM38O00635 465 aa9.44□□□□□ -0.9
HDAC3-215ENST00000519474 NEMP1O14524 444 aa9.44□□□□□ -0.9
HDAC3-215ENST00000519474 TRAFD1O14545 582 aaPredicted RBP9.44□□□□□ -0.9
HDAC3-215ENST00000519474 ENC1O14682 589 aa9.44□□□□□ -0.9
HDAC3-215ENST00000519474 RIOK3O14730 519 aaKnown RBP9.44□□□□□ -0.9
HDAC3-215ENST00000519474 YKT6O15498 198 aa9.44□□□□□ -0.9
HDAC3-215ENST00000519474 TPD52L2O43399 206 aaKnown RBP9.44□□□□□ -0.9
HDAC3-215ENST00000519474 MAFKO60675 156 aa9.44□□□□□ -0.9
HDAC3-215ENST00000519474 KRT37O76014 449 aa9.44□□□□□ -0.9
HDAC3-215ENST00000519474 TM7SF2O76062 418 aa9.44□□□□□ -0.9
HDAC3-215ENST00000519474 PIGNO95427 931 aa9.44□□□□□ -0.9
HDAC3-215ENST00000519474 CD48P09326 243 aa9.44□□□□□ -0.9
HDAC3-215ENST00000519474 H2AFZP0C0S5 128 aa9.44□□□□□ -0.9
HDAC3-215ENST00000519474 DGKAP23743 735 aa9.44□□□□□ -0.9
HDAC3-215ENST00000519474 ARL4AP40617 200 aa9.44□□□□□ -0.9
HDAC3-215ENST00000519474 TAS2R40P59535 323 aa9.44□□□□□ -0.9
HDAC3-215ENST00000519474 PFN3P60673 137 aa9.44□□□□□ -0.9
HDAC3-215ENST00000519474 SLC10A7Q0GE19 358 aa9.44□□□□□ -0.9
HDAC3-215ENST00000519474 TBX2Q13207 712 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms