RNA–Protein interactions for RNA: ENST00000519116.5

CTNNA1-214, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-214ENST00000519116 EFHD1Q9BUP0 239 aa6.56□□□□□ -1.36
CTNNA1-214ENST00000519116 REPIN1Q9BWE0 567 aaKnown RBP6.56□□□□□ -1.36
CTNNA1-214ENST00000519116 CEP44Q9C0F1 390 aa6.56□□□□□ -1.36
CTNNA1-214ENST00000519116 TNKS2Q9H2K2 1166 aa6.56□□□□□ -1.36
CTNNA1-214ENST00000519116 ZSCAN16Q9H4T2 348 aaPredicted RBP6.56□□□□□ -1.36
CTNNA1-214ENST00000519116 FAM204AQ9H8W3 233 aa6.56□□□□□ -1.36
CTNNA1-214ENST00000519116 POPDC2Q9HBU9 364 aa6.56□□□□□ -1.36
CTNNA1-214ENST00000519116 FAM13BQ9NYF5 915 aa6.56□□□□□ -1.36
CTNNA1-214ENST00000519116 VPS51Q9UID3 782 aa6.56□□□□□ -1.36
CTNNA1-214ENST00000519116 GGT7Q9UJ14 662 aa6.56□□□□□ -1.36
CTNNA1-214ENST00000519116 PNMA8BQ9ULN7 279 aaPredicted RBP6.56□□□□□ -1.36
CTNNA1-214ENST00000519116 WASF2Q9Y6W5 498 aa6.56□□□□□ -1.36
CTNNA1-214ENST00000519116 NKX2-8O15522 239 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 ZW10O43264 779 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 SMAD6O43541 496 aaKnown RBP6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 RAD1O60671 282 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 ENDOD1O94919 500 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 YEATS4O95619 227 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 RHOCP08134 193 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 PRKAR1AP10644 381 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 EPB41P11171 864 aaKnown RBP6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 CCL4P13236 92 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 SYT1P21579 422 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 HTR1BP28222 390 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 UGT1A3P35503 534 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 RPL34P49207 117 aaKnown RBP6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 MLLT10P55197 1068 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 YWHAZP63104 245 aaKnown RBP6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 CDK17Q00537 523 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 MC1RQ01726 317 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 SLC20A2Q08357 652 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 CDC20Q12834 499 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 ADAM9Q13443 819 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 EIF4EBP2Q13542 120 aaPredicted RBP6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 ARHGEF7Q14155 803 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 C16orf72Q14CZ0 275 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 CLPPQ16740 277 aaPredicted RBP6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 ALG11Q2TAA5 492 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 RETSATQ6NUM9 610 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 OGFOD3Q6PK18 319 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 TMEM270Q6UE05 265 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 LINGO4Q6UY18 593 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 PARS2Q7L3T8 475 aaKnown RBP6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 SETD3Q86TU7 594 aaPredicted RBP6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 PIM3Q86V86 326 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 VPS36Q86VN1 386 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 GRAMD1CQ8IYS0 662 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 UBR7Q8N806 425 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 KIAA1143Q96AT1 154 aaPredicted RBP6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 PAGE5Q96GU1 130 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 ZNF396Q96N95 335 aaPredicted RBP6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 DDA1Q9BW61 102 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 ASPSCR1Q9BZE9 553 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 SEMA6CQ9H3T2 930 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 THAP9Q9H5L6 903 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 PRDM8Q9NQV8 689 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 ST7Q9NRC1 585 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 VANGL2Q9ULK5 521 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 COQ4Q9Y3A0 265 aa6.55□□□□□ -1.36
CTNNA1-214ENST00000519116 A1L4Q6 167 aa6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 C16orf96A6NNT2 1141 aa6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 EFCAB7A8K855 629 aa6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 NUDT21O43809 227 aaKnown RBP6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 ZNF821O75541 412 aaPredicted RBP6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 TM7SF2O76062 418 aa6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 CPNE6O95741 557 aa6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 PRKCGP05129 697 aa6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 MYL1P05976 194 aa6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 FGF3P11487 239 aaPredicted RBP6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 POU3F2P20265 443 aaPredicted RBP6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 GNLYP22749 145 aa6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 BRD2P25440 801 aaKnown RBP6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 MAP4P27816 1152 aaKnown RBP6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 DCTP40126 519 aa6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 ABL2P42684 1182 aa6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 UQCRFS1P47985 274 aa6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 DNA2P51530 1060 aa6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 IRAK1P51617 712 aa6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 CCNHP51946 323 aaPredicted RBP6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 COPB1P53618 953 aaKnown RBP6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 SRP54P61011 504 aaKnown RBP6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 PITX1P78337 314 aaPredicted RBP6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 TRA2AQ13595 282 aaKnown RBP eCLIP6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 CUL4AQ13619 759 aa6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 HLTFQ14527 1009 aaKnown RBP eCLIP6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 NFATC4Q14934 902 aa6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 TCEA2Q15560 299 aa6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 DEFB109BQ30KR1 87 aa6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 C5orf22Q49AR2 442 aa6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 C14orf28Q4W4Y0 310 aa6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 CRTC2Q53ET0 693 aaPredicted RBP6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 ZNF805Q5CZA5 627 aa6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 CARD16Q5EG05 197 aa6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 TCTN3Q6NUS6 607 aa6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 MAMDC2Q7Z304 686 aaPredicted RBP6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 TMPRSS9Q7Z410 1059 aa6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 AGBL5Q8NDL9 886 aa6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 FAM46DQ8NEK8 389 aa6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 CXorf40AQ8TE69 158 aa6.54□□□□□ -1.36
CTNNA1-214ENST00000519116 STK32AQ8WU08 396 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms