RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 LRIG1Q96JA1 1093 aa13.46□□□□□ -0.25
VEGFA-219ENST00000518824 BMFQ96LC9 184 aa13.46□□□□□ -0.25
VEGFA-219ENST00000518824 KLF6Q99612 283 aaPredicted RBP13.46□□□□□ -0.25
VEGFA-219ENST00000518824 CINPQ9BW66 212 aaPredicted RBP13.46□□□□□ -0.25
VEGFA-219ENST00000518824 CPEB1Q9BZB8 566 aaKnown RBP13.46□□□□□ -0.25
VEGFA-219ENST00000518824 SUV39H2Q9H5I1 410 aa13.46□□□□□ -0.25
VEGFA-219ENST00000518824 DONSONQ9NYP3 566 aa13.46□□□□□ -0.25
VEGFA-219ENST00000518824 COQ6Q9Y2Z9 468 aa13.46□□□□□ -0.25
VEGFA-219ENST00000518824 PCDHA13Q9Y5I0 950 aa13.46□□□□□ -0.25
VEGFA-219ENST00000518824 TDRD6O60522 2096 aaKnown RBP13.45□□□□□ -0.26
VEGFA-219ENST00000518824 A0A1B0GTQ1 180 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 POM121BA6NF01 834 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 UPK3BL1B0FP48 263 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 UPK3BL2E5RIL1 263 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 PRAMEF26H0Y7S4 382 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 AP1G1O43747 822 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 MMP20O60882 483 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 CBFA2T3O75081 653 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 COMTP21964 271 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 SCNN1BP51168 640 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 BNIP3Q12983 259 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 TCEAL1Q15170 157 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 PTPRRQ15256 657 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 LLGL1Q15334 1064 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 TPRG1LQ5T0D9 272 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 TMCO4Q5TGY1 634 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 IL27RAQ6UWB1 636 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 DBX2Q6ZNG2 339 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 B4GALNT4Q76KP1 1039 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 TMEM139Q8IV31 216 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 RHOT2Q8IXI1 618 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 ATPAF2Q8N5M1 289 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 MFSD2AQ8NA29 543 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 SPC24Q8NBT2 197 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 ACRBPQ8NEB7 543 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 OR13H1Q8NG92 308 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 PANX2Q96RD6 677 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 ZNF670Q9BS34 389 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 WRAP53Q9BUR4 548 aaKnown RBP13.45□□□□□ -0.26
VEGFA-219ENST00000518824 OSBPL1AQ9BXW6 950 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 SLC17A9Q9BYT1 436 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 RCOR3Q9P2K3 495 aaPredicted RBP13.45□□□□□ -0.26
VEGFA-219ENST00000518824 DKK3Q9UBP4 350 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 INTUQ9ULD6 942 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 DMTF1Q9Y222 760 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 DUSP10Q9Y6W6 482 aa13.45□□□□□ -0.26
VEGFA-219ENST00000518824 TSPAN11A1L157 253 aa13.44□□□□□ -0.26
VEGFA-219ENST00000518824 LRRD1A4D1F6 860 aa13.44□□□□□ -0.26
VEGFA-219ENST00000518824 KRT7P08729 469 aa13.44□□□□□ -0.26
VEGFA-219ENST00000518824 CEACAM1P13688 526 aa13.44□□□□□ -0.26
VEGFA-219ENST00000518824 CR2P20023 1033 aa13.44□□□□□ -0.26
VEGFA-219ENST00000518824 SPINK2P20155 84 aa13.44□□□□□ -0.26
VEGFA-219ENST00000518824 HNRNPA2B1P22626 353 aaKnown RBP13.44□□□□□ -0.26
VEGFA-219ENST00000518824 ARHGAP25P42331 645 aa13.44□□□□□ -0.26
VEGFA-219ENST00000518824 CSNK1DP48730 415 aa13.44□□□□□ -0.26
VEGFA-219ENST00000518824 MARCKSL1P49006 195 aa13.44□□□□□ -0.26
VEGFA-219ENST00000518824 RPS21P63220 83 aaKnown RBP13.44□□□□□ -0.26
VEGFA-219ENST00000518824 RAD51Q06609 339 aa13.44□□□□□ -0.26
VEGFA-219ENST00000518824 GALNT2Q10471 571 aa13.44□□□□□ -0.26
VEGFA-219ENST00000518824 STAT4Q14765 748 aa13.44□□□□□ -0.26
VEGFA-219ENST00000518824 PDK2Q15119 407 aa13.44□□□□□ -0.26
VEGFA-219ENST00000518824 ZFYVE27Q5T4F4 411 aa13.44□□□□□ -0.26
VEGFA-219ENST00000518824 NPNTQ6UXI9 565 aa13.44□□□□□ -0.26
VEGFA-219ENST00000518824 NYAP1Q6ZVC0 841 aa13.44□□□□□ -0.26
VEGFA-219ENST00000518824 SLC22A18ASQ8N1D0 253 aa13.44□□□□□ -0.26
VEGFA-219ENST00000518824 PLD5Q8N7P1 536 aa13.44□□□□□ -0.26
VEGFA-219ENST00000518824 SETD7Q8WTS6 366 aaKnown RBP13.44□□□□□ -0.26
VEGFA-219ENST00000518824 RNF25Q96BH1 459 aaPredicted RBP13.44□□□□□ -0.26
VEGFA-219ENST00000518824 FEM1CQ96JP0 617 aa13.44□□□□□ -0.26
VEGFA-219ENST00000518824 RNF157Q96PX1 679 aa13.44□□□□□ -0.26
VEGFA-219ENST00000518824 SMIM14Q96QK8 99 aa13.44□□□□□ -0.26
VEGFA-219ENST00000518824 PSKH2Q96QS6 385 aa13.44□□□□□ -0.26
VEGFA-219ENST00000518824 ELF4Q99607 663 aaPredicted RBP13.44□□□□□ -0.26
VEGFA-219ENST00000518824 C1QTNF2Q9BXJ5 285 aa13.44□□□□□ -0.26
VEGFA-219ENST00000518824 PCDH12Q9NPG4 1184 aa13.44□□□□□ -0.26
VEGFA-219ENST00000518824 SEPT3Q9UH03 358 aa13.44□□□□□ -0.26
VEGFA-219ENST00000518824 PCOLCE2Q9UKZ9 415 aa13.44□□□□□ -0.26
VEGFA-219ENST00000518824 EPN1Q9Y6I3 576 aaPredicted RBP13.44□□□□□ -0.26
VEGFA-219ENST00000518824 NEMP1O14524 444 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 TRAFD1O14545 582 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-219ENST00000518824 TSPAN6O43657 245 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 SDC3O75056 442 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 NDUFA10O95299 355 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 KRT1P04264 644 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 ZNF883P0CG24 379 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 THEGLP0DJG4 465 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 PMLP29590 882 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 SERPINB6P35237 376 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 GARSP41250 739 aaKnown RBP13.43□□□□□ -0.26
VEGFA-219ENST00000518824 NOP2P46087 812 aaKnown RBP13.43□□□□□ -0.26
VEGFA-219ENST00000518824 SIM1P81133 766 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-219ENST00000518824 CCDC15Q0P6D6 951 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 RALGDSQ12967 914 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 SLC14A1Q13336 389 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 RFTN1Q14699 578 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-219ENST00000518824 UGP2Q16851 508 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 ZNF542PQ5EBM4 170 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 KIAA1161Q6NSJ0 714 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 MFSD7Q6UXD7 560 aa13.43□□□□□ -0.26
VEGFA-219ENST00000518824 KANSL1Q7Z3B3 1105 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms