RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 SUV39H2Q9H5I1 410 aa22.24■■□□□ 1.15
VEGFA-217ENST00000518538 ATP13A3Q9H7F0 1226 aa22.24■■□□□ 1.15
VEGFA-217ENST00000518538 CAPN10Q9HC96 672 aa22.24■■□□□ 1.15
VEGFA-217ENST00000518538 SLC6A14Q9UN76 642 aa22.24■■□□□ 1.15
VEGFA-217ENST00000518538 FADS3Q9Y5Q0 445 aa22.24■■□□□ 1.15
VEGFA-217ENST00000518538 TSPAN11A1L157 253 aa22.23■■□□□ 1.15
VEGFA-217ENST00000518538 PRR5-ARHGAP8B1AHC4 643 aa22.23■■□□□ 1.15
VEGFA-217ENST00000518538 PPP1R12AO14974 1030 aaPredicted RBP22.23■■□□□ 1.15
VEGFA-217ENST00000518538 GJB3O75712 270 aa22.23■■□□□ 1.15
VEGFA-217ENST00000518538 FTCDO95954 541 aa22.23■■□□□ 1.15
VEGFA-217ENST00000518538 CCNB1P14635 433 aa22.23■■□□□ 1.15
VEGFA-217ENST00000518538 SERPINA4P29622 427 aa22.23■■□□□ 1.15
VEGFA-217ENST00000518538 NUDT1P36639 197 aa22.23■■□□□ 1.15
VEGFA-217ENST00000518538 ABL2P42684 1182 aa22.23■■□□□ 1.15
VEGFA-217ENST00000518538 IRX4P78413 519 aa22.23■■□□□ 1.15
VEGFA-217ENST00000518538 LLGL1Q15334 1064 aa22.23■■□□□ 1.15
VEGFA-217ENST00000518538 AASDHQ4L235 1098 aaPredicted RBP22.23■■□□□ 1.15
VEGFA-217ENST00000518538 RALGPS1Q5JS13 557 aa22.23■■□□□ 1.15
VEGFA-217ENST00000518538 BZW1Q7L1Q6 419 aaKnown RBP22.23■■□□□ 1.15
VEGFA-217ENST00000518538 UBL4BQ8N7F7 174 aa22.23■■□□□ 1.15
VEGFA-217ENST00000518538 LRRN4Q8WUT4 740 aa22.23■■□□□ 1.15
VEGFA-217ENST00000518538 ALG3Q92685 438 aa22.23■■□□□ 1.15
VEGFA-217ENST00000518538 NUDCD1Q96RS6 583 aa22.23■■□□□ 1.15
VEGFA-217ENST00000518538 LGMNQ99538 433 aa22.23■■□□□ 1.15
VEGFA-217ENST00000518538 BRD8Q9H0E9 1235 aa22.23■■□□□ 1.15
VEGFA-217ENST00000518538 NT5MQ9NPB1 228 aa22.23■■□□□ 1.15
VEGFA-217ENST00000518538 HAUS2Q9NVX0 235 aa22.23■■□□□ 1.15
VEGFA-217ENST00000518538 AMACRQ9UHK6 382 aa22.23■■□□□ 1.15
VEGFA-217ENST00000518538 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.22■■□□□ 1.15
VEGFA-217ENST00000518538 LNP1A1A4G5 178 aa22.22■■□□□ 1.15
VEGFA-217ENST00000518538 RNGTTO60942 597 aaKnown RBP22.22■■□□□ 1.15
VEGFA-217ENST00000518538 PTPN7P35236 360 aa22.22■■□□□ 1.15
VEGFA-217ENST00000518538 MAXP61244 160 aa22.22■■□□□ 1.15
VEGFA-217ENST00000518538 BCL2L1Q07817 233 aa22.22■■□□□ 1.15
VEGFA-217ENST00000518538 ADCY2Q08462 1091 aa22.22■■□□□ 1.15
VEGFA-217ENST00000518538 CFAP58Q5T655 872 aa22.22■■□□□ 1.15
VEGFA-217ENST00000518538 BRAT1Q6PJG6 821 aa22.22■■□□□ 1.15
VEGFA-217ENST00000518538 PRPF39Q86UA1 669 aaKnown RBP22.22■■□□□ 1.15
VEGFA-217ENST00000518538 CAMK1DQ8IU85 385 aa22.22■■□□□ 1.15
VEGFA-217ENST00000518538 EBF2Q9HAK2 575 aa22.22■■□□□ 1.15
VEGFA-217ENST00000518538 TM9SF3Q9HD45 589 aa22.22■■□□□ 1.15
VEGFA-217ENST00000518538 SCUBE2Q9NQ36 999 aa22.22■■□□□ 1.15
VEGFA-217ENST00000518538 EFR3BQ9Y2G0 817 aa22.22■■□□□ 1.15
VEGFA-217ENST00000518538 SLCO1B1Q9Y6L6 691 aa22.22■■□□□ 1.15
VEGFA-217ENST00000518538 FRYLO94915 3013 aa22.22■■□□□ 1.15
VEGFA-217ENST00000518538 GVINP1Q7Z2Y8 2422 aa22.21■■□□□ 1.15
VEGFA-217ENST00000518538 NEBLO76041 1014 aa22.21■■□□□ 1.15
VEGFA-217ENST00000518538 PCDH8O95206 1070 aa22.21■■□□□ 1.15
VEGFA-217ENST00000518538 TIMP2P16035 220 aa22.21■■□□□ 1.15
VEGFA-217ENST00000518538 PECAM1P16284 738 aaPredicted RBP22.21■■□□□ 1.15
VEGFA-217ENST00000518538 SUOXP51687 545 aa22.21■■□□□ 1.15
VEGFA-217ENST00000518538 ARHGAP8P85298 464 aa22.21■■□□□ 1.15
VEGFA-217ENST00000518538 ALG1LQ6GMV1 187 aa22.21■■□□□ 1.15
VEGFA-217ENST00000518538 KIAA1161Q6NSJ0 714 aa22.21■■□□□ 1.15
VEGFA-217ENST00000518538 BBS12Q6ZW61 710 aa22.21■■□□□ 1.15
VEGFA-217ENST00000518538 TTC7BQ86TV6 843 aa22.21■■□□□ 1.15
VEGFA-217ENST00000518538 ZSCAN30Q86W11 494 aa22.21■■□□□ 1.15
VEGFA-217ENST00000518538 HORMAD1Q86X24 394 aa22.21■■□□□ 1.15
VEGFA-217ENST00000518538 UBE2Q2Q8WVN8 375 aa22.21■■□□□ 1.15
VEGFA-217ENST00000518538 P3H4Q92791 437 aa22.21■■□□□ 1.15
VEGFA-217ENST00000518538 ECHDC3Q96DC8 303 aa22.21■■□□□ 1.15
VEGFA-217ENST00000518538 PDLIM2Q96JY6 352 aa22.21■■□□□ 1.15
VEGFA-217ENST00000518538 NSMCE3Q96MG7 304 aa22.21■■□□□ 1.15
VEGFA-217ENST00000518538 POLR1EQ9GZS1 481 aaKnown RBP22.21■■□□□ 1.15
VEGFA-217ENST00000518538 LZTFL1Q9NQ48 299 aa22.21■■□□□ 1.15
VEGFA-217ENST00000518538 RXFP3Q9NSD7 469 aa22.21■■□□□ 1.15
VEGFA-217ENST00000518538 RBM22Q9NW64 420 aaKnown RBP eCLIP22.21■■□□□ 1.156e-11■■■■■ 34.3
VEGFA-217ENST00000518538 PACSIN2Q9UNF0 486 aaPredicted RBP22.21■■□□□ 1.15
VEGFA-217ENST00000518538 DMTF1Q9Y222 760 aa22.21■■□□□ 1.15
VEGFA-217ENST00000518538 PPP2R2CQ9Y2T4 447 aa22.21■■□□□ 1.15
VEGFA-217ENST00000518538 SHROOM3Q8TF72 1996 aa22.21■■□□□ 1.15
VEGFA-217ENST00000518538 A0A1W2PQU0 124 aa22.2■■□□□ 1.14
VEGFA-217ENST00000518538 TTC24A2A3L6 582 aaPredicted RBP22.2■■□□□ 1.14
VEGFA-217ENST00000518538 TRAFD1O14545 582 aaPredicted RBP22.2■■□□□ 1.14
VEGFA-217ENST00000518538 AREL1O15033 823 aa22.2■■□□□ 1.14
VEGFA-217ENST00000518538 DDX3YO15523 660 aaKnown RBP22.2■■□□□ 1.14
VEGFA-217ENST00000518538 SPINT1O43278 529 aa22.2■■□□□ 1.14
VEGFA-217ENST00000518538 TSPAN6O43657 245 aa22.2■■□□□ 1.14
VEGFA-217ENST00000518538 MAT2AP31153 395 aaKnown RBP22.2■■□□□ 1.14
VEGFA-217ENST00000518538 CETN2P41208 172 aa22.2■■□□□ 1.14
VEGFA-217ENST00000518538 AFF3P51826 1226 aaKnown RBP22.2■■□□□ 1.14
VEGFA-217ENST00000518538 RACK1P63244 317 aaKnown RBP22.2■■□□□ 1.14
VEGFA-217ENST00000518538 IFI35P80217 286 aaPredicted RBP22.2■■□□□ 1.14
VEGFA-217ENST00000518538 AP1B1Q10567 949 aa22.2■■□□□ 1.14
VEGFA-217ENST00000518538 ZNF284Q2VY69 593 aa22.2■■□□□ 1.14
VEGFA-217ENST00000518538 SETMARQ53H47 684 aaPredicted RBP22.2■■□□□ 1.14
VEGFA-217ENST00000518538 HES6Q96HZ4 224 aa22.2■■□□□ 1.14
VEGFA-217ENST00000518538 FEM1CQ96JP0 617 aa22.2■■□□□ 1.14
VEGFA-217ENST00000518538 EDEM2Q9BV94 578 aa22.2■■□□□ 1.14
VEGFA-217ENST00000518538 HEMGNQ9BXL5 484 aa22.2■■□□□ 1.14
VEGFA-217ENST00000518538 OSBPL8Q9BZF1 889 aa22.2■■□□□ 1.14
VEGFA-217ENST00000518538 NOD2Q9HC29 1040 aa22.2■■□□□ 1.14
VEGFA-217ENST00000518538 SAE1Q9UBE0 346 aaPredicted RBP22.2■■□□□ 1.14
VEGFA-217ENST00000518538 ZFR2Q9UPR6 939 aaKnown RBP22.2■■□□□ 1.14
VEGFA-217ENST00000518538 PTPRZ1P23471 2315 aaPredicted RBP22.2■■□□□ 1.14
VEGFA-217ENST00000518538 UPK3BL1B0FP48 263 aa22.19■■□□□ 1.14
VEGFA-217ENST00000518538 UPK3BL2E5RIL1 263 aa22.19■■□□□ 1.14
VEGFA-217ENST00000518538 KCNK1O00180 336 aa22.19■■□□□ 1.14
VEGFA-217ENST00000518538 NEMP1O14524 444 aa22.19■■□□□ 1.14
VEGFA-217ENST00000518538 GDF9O60383 454 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms