RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 CDY1Q9Y6F8 540 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 PDS5AQ29RF7 1337 aaKnown RBP-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 MEGF6O75095 1541 aa-0.69□□□□□ -2.52
RNU6-542P-201ENST00000516405 J3QKU1 62 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 HSPB6O14558 160 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 HTRA2O43464 458 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 TIPRLO75663 272 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 CNTN5O94779 1100 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 IGLV3-19P01714 112 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 HOXD4P09016 255 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 MYZAPP0CAP1 466 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 TGM2P21980 687 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 NTSR1P30989 418 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 CHRNA3P32297 505 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 SLC8A1P32418 973 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 DPP6P42658 865 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 NEK4P51957 841 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 CRISP1P54107 249 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 SCAND1P57086 179 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 TAS2R38P59533 333 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 ECT2LQ008S8 904 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 ELF2Q15723 593 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 SGSM1Q2NKQ1 1148 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 ZNF326Q5BKZ1 582 aaKnown RBP-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 EMC10Q5UCC4 262 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 IRGCQ6NXR0 463 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 IGFL1Q6UW32 110 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 CLEC9AQ6UXN8 241 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 Q6ZSR9 355 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 LINC00336Q6ZUF6 198 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 SND1Q7KZF4 910 aaKnown RBP eCLIP-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 VASH2Q86V25 355 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 KMT5CQ86Y97 462 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 C17orf53Q8N3J3 647 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 DPP10Q8N608 796 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 ZNF611Q8N823 705 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 JMYQ8N9B5 988 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 RAPGEF4Q8WZA2 1011 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 ZNF333Q96JL9 665 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 NPAS1Q99742 590 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 ABHD14AQ9BUJ0 271 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 MSTO1Q9BUK6 570 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 DDX23Q9BUQ8 820 aaKnown RBP-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 BCL2L13Q9BXK5 485 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 CCDC113Q9H0I3 377 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 UPF3AQ9H1J1 476 aaKnown RBP-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 FZD8Q9H461 694 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 UPF2Q9HAU5 1272 aaKnown RBP-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 KRT84Q9NSB2 600 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 ZNF586Q9NXT0 402 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 FBXO4Q9UKT5 387 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 TMX2Q9Y320 296 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 LMTK3Q96Q04 1460 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 STK36Q9NRP7 1315 aa-0.7□□□□□ -2.52
RNU6-542P-201ENST00000516405 ARPC4-TTLL3A0A0A6YYG9 625 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 PHF1O43189 567 aaPredicted RBP-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 RASA4O43374 803 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 KAT7O95251 611 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 C22orf31O95567 290 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 CAVIN2O95810 425 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 TSHBP01222 138 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 FAM157CP0CG43 387 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 MST1P26927 711 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 HTR7P34969 479 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 PSMD8P48556 350 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 AARSP49588 968 aaKnown RBP eCLIP-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 COPAP53621 1224 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 EPHB1P54762 984 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 KRTAP12-1P59990 96 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 HDLBPQ00341 1268 aaKnown RBP-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 SP3Q02447 781 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 LRRC63Q05C16 580 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 ZNF33BQ06732 778 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 LY6DQ14210 128 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 SART3Q15020 963 aaKnown RBP-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 CLUL1Q15846 466 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 LY6EQ16553 131 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 ATP13A4Q4VNC1 1196 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 PAPPA-AS1Q5QFB9 102 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 ZNF691Q5VV52 312 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 OLFML2AQ68BL7 652 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 CCDC129Q6ZRS4 1044 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 SH2D5Q6ZV89 423 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 CCDC25Q86WR0 208 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 Q8NBF4 154 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 U2AF1L4Q8WU68 220 aaKnown RBP-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 SCRN2Q96FV2 425 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 PDLIM5Q96HC4 596 aaKnown RBP-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 MPP4Q96JB8 637 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 POLR3CQ9BUI4 534 aaPredicted RBP-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 STK33Q9BYT3 514 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 FRMD8Q9BZ67 464 aaPredicted RBP-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 BICC1Q9H694 974 aaKnown RBP-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 WDCPQ9H6R7 721 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 VTA1Q9NP79 307 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 TMEM51Q9NW97 253 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 ZDHHC7Q9NXF8 308 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 ZNF69Q9UC07 566 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 TNFSF13BQ9Y275 285 aa-0.71□□□□□ -2.52
RNU6-542P-201ENST00000516405 SAMHD1Q9Y3Z3 626 aaKnown RBP-0.71□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms