RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 SIGLEC6O43699 453 aa17.89■□□□□ 0.45
SFXN1-212ENST00000515791 BUB1BO60566 1050 aaPredicted RBP17.89■□□□□ 0.45
SFXN1-212ENST00000515791 RFPL3O75679 317 aa17.89■□□□□ 0.45
SFXN1-212ENST00000515791 MYBL1P10243 752 aa17.89■□□□□ 0.45
SFXN1-212ENST00000515791 CKMT2P17540 419 aa17.89■□□□□ 0.45
SFXN1-212ENST00000515791 ACP1P24666 158 aa17.89■□□□□ 0.45
SFXN1-212ENST00000515791 PCK1P35558 622 aa17.89■□□□□ 0.45
SFXN1-212ENST00000515791 HCAR3P49019 387 aa17.89■□□□□ 0.45
SFXN1-212ENST00000515791 ZNF211Q13398 564 aaPredicted RBP17.89■□□□□ 0.45
SFXN1-212ENST00000515791 DPYSQ14117 519 aa17.89■□□□□ 0.45
SFXN1-212ENST00000515791 ARHGAP36Q6ZRI8 547 aa17.89■□□□□ 0.45
SFXN1-212ENST00000515791 TTC7BQ86TV6 843 aa17.89■□□□□ 0.45
SFXN1-212ENST00000515791 TMPRSS12Q86WS5 348 aa17.89■□□□□ 0.45
SFXN1-212ENST00000515791 ZSWIM9Q86XI8 627 aa17.89■□□□□ 0.45
SFXN1-212ENST00000515791 DENND6BQ8NEG7 585 aa17.89■□□□□ 0.45
SFXN1-212ENST00000515791 OR4C6Q8NH72 309 aa17.89■□□□□ 0.45
SFXN1-212ENST00000515791 MDM1Q8TC05 714 aa17.89■□□□□ 0.45
SFXN1-212ENST00000515791 HCAR2Q8TDS4 363 aa17.89■□□□□ 0.45
SFXN1-212ENST00000515791 NSMCE3Q96MG7 304 aa17.89■□□□□ 0.45
SFXN1-212ENST00000515791 UBA2Q9UBT2 640 aaPredicted RBP17.89■□□□□ 0.45
SFXN1-212ENST00000515791 PNMA8BQ9ULN7 279 aaPredicted RBP17.89■□□□□ 0.45
SFXN1-212ENST00000515791 CAPN11Q9UMQ6 739 aa17.89■□□□□ 0.45
SFXN1-212ENST00000515791 NENFQ9UMX5 172 aa17.89■□□□□ 0.45
SFXN1-212ENST00000515791 LRRK1Q38SD2 2015 aa17.88■□□□□ 0.45
SFXN1-212ENST00000515791 TDRD6O60522 2096 aaKnown RBP17.88■□□□□ 0.45
SFXN1-212ENST00000515791 LY6G6EA0A0G2JKS1 128 aa17.88■□□□□ 0.45
SFXN1-212ENST00000515791 TRABD2BA6NFA1 517 aa17.88■□□□□ 0.45
SFXN1-212ENST00000515791 RNF8O76064 485 aa17.88■□□□□ 0.45
SFXN1-212ENST00000515791 PIGNO95427 931 aa17.88■□□□□ 0.45
SFXN1-212ENST00000515791 CSF2P04141 144 aa17.88■□□□□ 0.45
SFXN1-212ENST00000515791 DESP17661 470 aa17.88■□□□□ 0.45
SFXN1-212ENST00000515791 UBASH3AP57075 661 aa17.88■□□□□ 0.45
SFXN1-212ENST00000515791 ILKQ13418 452 aa17.88■□□□□ 0.45
SFXN1-212ENST00000515791 CCDC157Q569K6 752 aa17.88■□□□□ 0.45
SFXN1-212ENST00000515791 ZNF542PQ5EBM4 170 aa17.88■□□□□ 0.45
SFXN1-212ENST00000515791 TXNRD3NBQ6F5E7 133 aa17.88■□□□□ 0.45
SFXN1-212ENST00000515791 PTAR1Q7Z6K3 402 aaPredicted RBP17.88■□□□□ 0.45
SFXN1-212ENST00000515791 TP53I13Q8NBR0 393 aaPredicted RBP17.88■□□□□ 0.45
SFXN1-212ENST00000515791 RFFLQ8WZ73 363 aa17.88■□□□□ 0.45
SFXN1-212ENST00000515791 TRIM11Q96F44 468 aa17.88■□□□□ 0.45
SFXN1-212ENST00000515791 CCDC86Q9H6F5 360 aaKnown RBP17.88■□□□□ 0.45
SFXN1-212ENST00000515791 MRPL47Q9HD33 250 aaKnown RBP17.88■□□□□ 0.45
SFXN1-212ENST00000515791 DONSONQ9NYP3 566 aa17.88■□□□□ 0.45
SFXN1-212ENST00000515791 MYO1AQ9UBC5 1043 aa17.88■□□□□ 0.45
SFXN1-212ENST00000515791 U3KQA8 63 aa17.88■□□□□ 0.45
SFXN1-212ENST00000515791 ANKRD11Q6UB99 2663 aaPredicted RBP17.88■□□□□ 0.45
SFXN1-212ENST00000515791 A0A087X0T9 212 aa17.87■□□□□ 0.45
SFXN1-212ENST00000515791 MUSKO15146 869 aa17.87■□□□□ 0.45
SFXN1-212ENST00000515791 PRPSAP2O60256 369 aa17.87■□□□□ 0.45
SFXN1-212ENST00000515791 MMP20O60882 483 aa17.87■□□□□ 0.45
SFXN1-212ENST00000515791 GYPCP04921 128 aa17.87■□□□□ 0.45
SFXN1-212ENST00000515791 FAM228BP0C875 321 aa17.87■□□□□ 0.45
SFXN1-212ENST00000515791 CDK4P11802 303 aa17.87■□□□□ 0.45
SFXN1-212ENST00000515791 IGFALSP35858 605 aa17.87■□□□□ 0.45
SFXN1-212ENST00000515791 RABIFP47224 123 aa17.87■□□□□ 0.45
SFXN1-212ENST00000515791 CSNK1DP48730 415 aa17.87■□□□□ 0.45
SFXN1-212ENST00000515791 ZBED6P86452 979 aa17.87■□□□□ 0.45
SFXN1-212ENST00000515791 RAD51Q06609 339 aa17.87■□□□□ 0.45
SFXN1-212ENST00000515791 EIF2B5Q13144 721 aaKnown RBP17.87■□□□□ 0.45
SFXN1-212ENST00000515791 SGCGQ13326 291 aa17.87■□□□□ 0.45
SFXN1-212ENST00000515791 ACAP1Q15027 740 aa17.87■□□□□ 0.45
SFXN1-212ENST00000515791 DPYSL2Q16555 572 aa17.87■□□□□ 0.45
SFXN1-212ENST00000515791 TMEM52BQ4KMG9 183 aa17.87■□□□□ 0.45
SFXN1-212ENST00000515791 TSEN2Q8NCE0 465 aaKnown RBP17.87■□□□□ 0.45
SFXN1-212ENST00000515791 ARHGEF26Q96DR7 871 aa17.87■□□□□ 0.45
SFXN1-212ENST00000515791 THAP2Q9H0W7 228 aa17.87■□□□□ 0.45
SFXN1-212ENST00000515791 SUV39H2Q9H5I1 410 aa17.87■□□□□ 0.45
SFXN1-212ENST00000515791 MBNL1Q9NR56 388 aaKnown RBP17.87■□□□□ 0.45
SFXN1-212ENST00000515791 ETNK2Q9NVF9 386 aa17.87■□□□□ 0.45
SFXN1-212ENST00000515791 RALYQ9UKM9 306 aaKnown RBP17.87■□□□□ 0.45
SFXN1-212ENST00000515791 BZW2Q9Y6E2 419 aaKnown RBP17.87■□□□□ 0.45
SFXN1-212ENST00000515791 ARHGAP42A6NI28 874 aa17.86■□□□□ 0.45
SFXN1-212ENST00000515791 FPGTO14772 594 aa17.86■□□□□ 0.45
SFXN1-212ENST00000515791 SCAMP1O15126 338 aa17.86■□□□□ 0.45
SFXN1-212ENST00000515791 PEX11BO96011 259 aa17.86■□□□□ 0.45
SFXN1-212ENST00000515791 SERPING1P05155 500 aa17.86■□□□□ 0.45
SFXN1-212ENST00000515791 NME1P15531 152 aaKnown RBP17.86■□□□□ 0.45
SFXN1-212ENST00000515791 SUOXP51687 545 aa17.86■□□□□ 0.45
SFXN1-212ENST00000515791 ZNF135P52742 658 aaPredicted RBP17.86■□□□□ 0.45
SFXN1-212ENST00000515791 UGP2Q16851 508 aa17.86■□□□□ 0.45
SFXN1-212ENST00000515791 PPP6R3Q5H9R7 873 aaPredicted RBP17.86■□□□□ 0.45
SFXN1-212ENST00000515791 POLNQ7Z5Q5 900 aa17.86■□□□□ 0.45
SFXN1-212ENST00000515791 NIPA2Q8N8Q9 360 aa17.86■□□□□ 0.45
SFXN1-212ENST00000515791 ECHDC3Q96DC8 303 aa17.86■□□□□ 0.45
SFXN1-212ENST00000515791 ZNF641Q96N77 438 aaPredicted RBP17.86■□□□□ 0.45
SFXN1-212ENST00000515791 NEMP1O14524 444 aa17.85■□□□□ 0.45
SFXN1-212ENST00000515791 RIOK3O14730 519 aaKnown RBP17.85■□□□□ 0.45
SFXN1-212ENST00000515791 TM7SF2O76062 418 aa17.85■□□□□ 0.45
SFXN1-212ENST00000515791 CYP1A2P05177 515 aa17.85■□□□□ 0.45
SFXN1-212ENST00000515791 RARAP10276 462 aa17.85■□□□□ 0.45
SFXN1-212ENST00000515791 CKMT1AP12532 417 aa17.85■□□□□ 0.45
SFXN1-212ENST00000515791 HNRNPKP61978 463 aaKnown RBP eCLIP17.85■□□□□ 0.45
SFXN1-212ENST00000515791 INSM1Q01101 510 aaPredicted RBP17.85■□□□□ 0.45
SFXN1-212ENST00000515791 SLC25A11Q02978 314 aaKnown RBP17.85■□□□□ 0.45
SFXN1-212ENST00000515791 IL10RBQ08334 325 aa17.85■□□□□ 0.45
SFXN1-212ENST00000515791 GOLGA4Q13439 2230 aaKnown RBP17.85■□□□□ 0.45
SFXN1-212ENST00000515791 PDE1CQ14123 709 aaPredicted RBP17.85■□□□□ 0.45
SFXN1-212ENST00000515791 GRM3Q14832 879 aa17.85■□□□□ 0.45
SFXN1-212ENST00000515791 MYLKQ15746 1914 aa17.85■□□□□ 0.45
SFXN1-212ENST00000515791 ZSCAN23Q3MJ62 389 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms