RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 TMEM170AQ8WVE7 144 aa4.06□□□□□ -1.76
LINC01088-211ENST00000515597 CCT6BQ92526 530 aa4.06□□□□□ -1.76
LINC01088-211ENST00000515597 TXNDC15Q96J42 360 aa4.06□□□□□ -1.76
LINC01088-211ENST00000515597 TTC12Q9H892 705 aaPredicted RBP4.06□□□□□ -1.76
LINC01088-211ENST00000515597 ENTPD7Q9NQZ7 604 aa4.06□□□□□ -1.76
LINC01088-211ENST00000515597 RASSF1Q9NS23 344 aa4.06□□□□□ -1.76
LINC01088-211ENST00000515597 RIPOR2Q9Y4F9 1068 aa4.06□□□□□ -1.76
LINC01088-211ENST00000515597 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.05□□□□□ -1.76
LINC01088-211ENST00000515597 DYTNA2CJ06 578 aa4.05□□□□□ -1.76
LINC01088-211ENST00000515597 PRR23AA6NEV1 266 aa4.05□□□□□ -1.76
LINC01088-211ENST00000515597 B9A039 149 aa4.05□□□□□ -1.76
LINC01088-211ENST00000515597 TCEA3O75764 348 aa4.05□□□□□ -1.76
LINC01088-211ENST00000515597 KRT36O76013 467 aa4.05□□□□□ -1.76
LINC01088-211ENST00000515597 F7P08709 466 aaPredicted RBP4.05□□□□□ -1.76
LINC01088-211ENST00000515597 MYF6P23409 242 aa4.05□□□□□ -1.76
LINC01088-211ENST00000515597 ARSFP54793 590 aa4.05□□□□□ -1.76
LINC01088-211ENST00000515597 LPIN1Q14693 890 aa4.05□□□□□ -1.76
LINC01088-211ENST00000515597 GRAMD1BQ3KR37 738 aa4.05□□□□□ -1.76
LINC01088-211ENST00000515597 FBXO43Q4G163 708 aa4.05□□□□□ -1.76
LINC01088-211ENST00000515597 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
LINC01088-211ENST00000515597 GHDCQ8N2G8 530 aa4.05□□□□□ -1.76
LINC01088-211ENST00000515597 TMEM57Q8N5G2 664 aa4.05□□□□□ -1.76
LINC01088-211ENST00000515597 AFG1LQ8WV93 481 aa4.05□□□□□ -1.76
LINC01088-211ENST00000515597 TRIM63Q969Q1 353 aa4.05□□□□□ -1.76
LINC01088-211ENST00000515597 RNF183Q96D59 192 aa4.05□□□□□ -1.76
LINC01088-211ENST00000515597 HES6Q96HZ4 224 aa4.05□□□□□ -1.76
LINC01088-211ENST00000515597 ARPC5LQ9BPX5 153 aa4.05□□□□□ -1.76
LINC01088-211ENST00000515597 GAREM1Q9H706 876 aa4.05□□□□□ -1.76
LINC01088-211ENST00000515597 TMEM51Q9NW97 253 aa4.05□□□□□ -1.76
LINC01088-211ENST00000515597 FEM1BQ9UK73 627 aa4.05□□□□□ -1.76
LINC01088-211ENST00000515597 CNPY2Q9Y2B0 182 aa4.05□□□□□ -1.76
LINC01088-211ENST00000515597 DNAJC16Q9Y2G8 782 aa4.05□□□□□ -1.76
LINC01088-211ENST00000515597 TIMM23O14925 209 aa4.04□□□□□ -1.76
LINC01088-211ENST00000515597 SP1P08047 785 aa4.04□□□□□ -1.76
LINC01088-211ENST00000515597 FMO4P31512 558 aa4.04□□□□□ -1.76
LINC01088-211ENST00000515597 TTKP33981 857 aa4.04□□□□□ -1.76
LINC01088-211ENST00000515597 GRK6P43250 576 aa4.04□□□□□ -1.76
LINC01088-211ENST00000515597 SLC18A3Q16572 532 aa4.04□□□□□ -1.76
LINC01088-211ENST00000515597 PLEKHO1Q53GL0 409 aaPredicted RBP4.04□□□□□ -1.76
LINC01088-211ENST00000515597 HERC6Q8IVU3 1022 aa4.04□□□□□ -1.76
LINC01088-211ENST00000515597 DENND6AQ8IWF6 608 aa4.04□□□□□ -1.76
LINC01088-211ENST00000515597 ANKRD44Q8N8A2 993 aa4.04□□□□□ -1.76
LINC01088-211ENST00000515597 SPATA5Q8NB90 893 aa4.04□□□□□ -1.76
LINC01088-211ENST00000515597 RASSF8Q8NHQ8 419 aa4.04□□□□□ -1.76
LINC01088-211ENST00000515597 SPATA20Q8TB22 786 aa4.04□□□□□ -1.76
LINC01088-211ENST00000515597 RILPL2Q969X0 211 aa4.04□□□□□ -1.76
LINC01088-211ENST00000515597 SH3KBP1Q96B97 665 aa4.04□□□□□ -1.76
LINC01088-211ENST00000515597 ADGRG7Q96K78 797 aa4.04□□□□□ -1.76
LINC01088-211ENST00000515597 GDAQ9Y2T3 454 aa4.04□□□□□ -1.76
LINC01088-211ENST00000515597 IGLV5-37A0A075B6J1 123 aa4.03□□□□□ -1.76
LINC01088-211ENST00000515597 BMPR1BO00238 502 aa4.03□□□□□ -1.76
LINC01088-211ENST00000515597 EBAG9O00559 213 aa4.03□□□□□ -1.76
LINC01088-211ENST00000515597 CHRM4P08173 479 aa4.03□□□□□ -1.76
LINC01088-211ENST00000515597 RPL3P39023 403 aaKnown RBP4.03□□□□□ -1.76
LINC01088-211ENST00000515597 KRTAP10-12P60413 245 aa4.03□□□□□ -1.76
LINC01088-211ENST00000515597 DDR1Q08345 913 aa4.03□□□□□ -1.76
LINC01088-211ENST00000515597 ILF3Q12906 894 aaKnown RBP eCLIP4.03□□□□□ -1.762e-7■■■□□ 17.6
LINC01088-211ENST00000515597 CAPSQ13938 189 aa4.03□□□□□ -1.76
LINC01088-211ENST00000515597 SF3B4Q15427 424 aaKnown RBP eCLIP4.03□□□□□ -1.76
LINC01088-211ENST00000515597 ADCK5Q3MIX3 580 aa4.03□□□□□ -1.76
LINC01088-211ENST00000515597 TYW3Q6IPR3 259 aaKnown RBP4.03□□□□□ -1.76
LINC01088-211ENST00000515597 CCDC129Q6ZRS4 1044 aa4.03□□□□□ -1.76
LINC01088-211ENST00000515597 NEK10Q6ZWH5 1172 aa4.03□□□□□ -1.76
LINC01088-211ENST00000515597 ZNF771Q7L3S4 317 aaPredicted RBP4.03□□□□□ -1.76
LINC01088-211ENST00000515597 MON1AQ86VX9 555 aa4.03□□□□□ -1.76
LINC01088-211ENST00000515597 FTSJ3Q8IY81 847 aaKnown RBP4.03□□□□□ -1.76
LINC01088-211ENST00000515597 AADATQ8N5Z0 425 aa4.03□□□□□ -1.76
LINC01088-211ENST00000515597 ZNF114Q8NC26 417 aa4.03□□□□□ -1.76
LINC01088-211ENST00000515597 TRIB2Q92519 343 aa4.03□□□□□ -1.76
LINC01088-211ENST00000515597 HSPH1Q92598 858 aa4.03□□□□□ -1.76
LINC01088-211ENST00000515597 FAM167BQ9BTA0 163 aa4.03□□□□□ -1.76
LINC01088-211ENST00000515597 SPATS2LQ9NUQ6 558 aaKnown RBP4.03□□□□□ -1.76
LINC01088-211ENST00000515597 ANKRD10Q9NXR5 420 aa4.03□□□□□ -1.76
LINC01088-211ENST00000515597 IFT80Q9P2H3 777 aaPredicted RBP4.03□□□□□ -1.76
LINC01088-211ENST00000515597 ATAD2BQ9ULI0 1458 aa4.03□□□□□ -1.76
LINC01088-211ENST00000515597 WDR62O43379 1518 aa4.02□□□□□ -1.77
LINC01088-211ENST00000515597 IFRD1O00458 451 aaPredicted RBP4.02□□□□□ -1.77
LINC01088-211ENST00000515597 SLC25A17O43808 307 aa4.02□□□□□ -1.77
LINC01088-211ENST00000515597 VNN2O95498 520 aa4.02□□□□□ -1.77
LINC01088-211ENST00000515597 AFPP02771 609 aaKnown RBP4.02□□□□□ -1.77
LINC01088-211ENST00000515597 CNPP09543 421 aaKnown RBP4.02□□□□□ -1.77
LINC01088-211ENST00000515597 CD72P21854 359 aa4.02□□□□□ -1.77
LINC01088-211ENST00000515597 CYP4A11Q02928 519 aa4.02□□□□□ -1.77
LINC01088-211ENST00000515597 ACSM2AQ08AH3 577 aa4.02□□□□□ -1.77
LINC01088-211ENST00000515597 SNTA1Q13424 505 aa4.02□□□□□ -1.77
LINC01088-211ENST00000515597 EFR3AQ14156 821 aa4.02□□□□□ -1.77
LINC01088-211ENST00000515597 ANO1Q5XXA6 986 aa4.02□□□□□ -1.77
LINC01088-211ENST00000515597 KLHL24Q6TFL4 600 aa4.02□□□□□ -1.77
LINC01088-211ENST00000515597 IL20RBQ6UXL0 311 aa4.02□□□□□ -1.77
LINC01088-211ENST00000515597 DSTYKQ6XUX3 929 aa4.02□□□□□ -1.77
LINC01088-211ENST00000515597 SFTPA2Q8IWL1 248 aa4.02□□□□□ -1.77
LINC01088-211ENST00000515597 MB21D2Q8IYB1 491 aaPredicted RBP4.02□□□□□ -1.77
LINC01088-211ENST00000515597 USP38Q8NB14 1042 aa4.02□□□□□ -1.77
LINC01088-211ENST00000515597 DNAAF1Q8NEP3 725 aa4.02□□□□□ -1.77
LINC01088-211ENST00000515597 CEP70Q8NHQ1 597 aa4.02□□□□□ -1.77
LINC01088-211ENST00000515597 RFWD2Q8NHY2 731 aa4.02□□□□□ -1.77
LINC01088-211ENST00000515597 YME1L1Q96TA2 773 aa4.02□□□□□ -1.77
LINC01088-211ENST00000515597 CLSTN3Q9BQT9 956 aa4.02□□□□□ -1.77
LINC01088-211ENST00000515597 LMAN2LQ9H0V9 348 aa4.02□□□□□ -1.77
LINC01088-211ENST00000515597 NOD2Q9HC29 1040 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms