RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, human

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUFY3-215	ENST00000515479	CATSPERB	Q9H7T0	1116 aa		4.81	□□□□□ -1.64
RUFY3-215	ENST00000515479	MDFIC	Q9P1T7	246 aa		4.81	□□□□□ -1.64
RUFY3-215	ENST00000515479	SLC39A10	Q9ULF5	831 aa		4.81	□□□□□ -1.64
RUFY3-215	ENST00000515479	DDX19B	Q9UMR2	479 aa		4.81	□□□□□ -1.64
RUFY3-215	ENST00000515479	MAGED2	Q9UNF1	606 aa	Predicted RBP	4.81	□□□□□ -1.64
RUFY3-215	ENST00000515479	PCDHGB1	Q9Y5G3	927 aa		4.81	□□□□□ -1.64
RUFY3-215	ENST00000515479	COPG1	Q9Y678	874 aa	Known RBP	4.81	□□□□□ -1.64
RUFY3-215	ENST00000515479	LAMA4	Q16363	1823 aa		4.81	□□□□□ -1.64
RUFY3-215	ENST00000515479	MRC1	P22897	1456 aa		4.81	□□□□□ -1.64
RUFY3-215	ENST00000515479	DDX60	Q8IY21	1712 aa	Known RBP	4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	CELF2	O95319	508 aa	Known RBP	4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	CHRNB2	P17787	502 aa		4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	TNFSF8	P32971	234 aa		4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	ART1	P52961	327 aa		4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	ZP1	P60852	638 aa		4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	ABAT	P80404	500 aa		4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	CALD1	Q05682	793 aa	Known RBP	4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	EIF4A2	Q14240	407 aa	Known RBP	4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	PLEKHO1	Q53GL0	409 aa	Predicted RBP	4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	HSP90AB2P	Q58FF8	381 aa		4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	C1orf141	Q5JVX7	400 aa		4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	C9orf50	Q5SZB4	431 aa		4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	AAGAB	Q6PD74	315 aa		4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	CUZD1	Q86UP6	607 aa		4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	FTSJ3	Q8IY81	847 aa	Known RBP	4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	NRSN1	Q8IZ57	195 aa		4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	DPP10	Q8N608	796 aa		4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	CNBD1	Q8NA66	436 aa		4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	CMAS	Q8NFW8	434 aa	Predicted RBP	4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	PJA1	Q8NG27	643 aa		4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	LMO3	Q8TAP4	145 aa		4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	DNASE2B	Q8WZ79	361 aa		4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	PPP1R10	Q96QC0	940 aa	Known RBP	4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	PRPF18	Q99633	342 aa	Known RBP	4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	MECR	Q9BV79	373 aa		4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	SORBS1	Q9BX66	1292 aa	Known RBP	4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	B3GNT4	Q9C0J1	378 aa		4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	TMX4	Q9H1E5	349 aa	Predicted RBP	4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	RMI1	Q9H9A7	625 aa		4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	PLSCR4	Q9NRQ2	329 aa		4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	ARL15	Q9NXU5	204 aa		4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	DTX4	Q9Y2E6	619 aa		4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	RBBP6	Q7Z6E9	1792 aa	Known RBP	4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	TCF20	Q9UGU0	1960 aa	Known RBP	4.8	□□□□□ -1.64
RUFY3-215	ENST00000515479	SOS1	Q07889	1333 aa	Predicted RBP	4.79	□□□□□ -1.64
RUFY3-215	ENST00000515479	LIAS	O43766	372 aa		4.79	□□□□□ -1.64
RUFY3-215	ENST00000515479	PRSS2	P07478	247 aa		4.79	□□□□□ -1.64
RUFY3-215	ENST00000515479	HMOX1	P09601	288 aa		4.79	□□□□□ -1.64
RUFY3-215	ENST00000515479	PKM	P14618	531 aa	Known RBP	4.79	□□□□□ -1.64
RUFY3-215	ENST00000515479	KLRC2	P26717	231 aa		4.79	□□□□□ -1.64
RUFY3-215	ENST00000515479	ALDH1B1	P30837	517 aa		4.79	□□□□□ -1.64
RUFY3-215	ENST00000515479	HUNK	P57058	714 aa		4.79	□□□□□ -1.64
RUFY3-215	ENST00000515479	TMPRSS3	P57727	454 aa		4.79	□□□□□ -1.64
RUFY3-215	ENST00000515479	DSC1	Q08554	894 aa		4.79	□□□□□ -1.64
RUFY3-215	ENST00000515479	SF3A3	Q12874	501 aa	Known RBP eCLIP	4.79	□□□□□ -1.64
RUFY3-215	ENST00000515479	LCE1E	Q5T753	118 aa		4.79	□□□□□ -1.64
RUFY3-215	ENST00000515479	CST9	Q5W186	159 aa		4.79	□□□□□ -1.64
RUFY3-215	ENST00000515479	ANKS1B	Q7Z6G8	1248 aa		4.79	□□□□□ -1.64
RUFY3-215	ENST00000515479	TMEM57	Q8N5G2	664 aa		4.79	□□□□□ -1.64
RUFY3-215	ENST00000515479	TMEM217	Q8N7C4	229 aa		4.79	□□□□□ -1.64
RUFY3-215	ENST00000515479	LRRC57	Q8N9N7	239 aa		4.79	□□□□□ -1.64
RUFY3-215	ENST00000515479	KDM1B	Q8NB78	822 aa		4.79	□□□□□ -1.64
RUFY3-215	ENST00000515479	PARD3B	Q8TEW8	1205 aa		4.79	□□□□□ -1.64
RUFY3-215	ENST00000515479	ADAMTS14	Q8WXS8	1223 aa		4.79	□□□□□ -1.64
RUFY3-215	ENST00000515479	ARHGAP45	Q92619	1136 aa		4.79	□□□□□ -1.64
RUFY3-215	ENST00000515479	MUL1	Q969V5	352 aa		4.79	□□□□□ -1.64
RUFY3-215	ENST00000515479	STK33	Q9BYT3	514 aa		4.79	□□□□□ -1.64
RUFY3-215	ENST00000515479	IGSF9	Q9P2J2	1179 aa		4.79	□□□□□ -1.64
RUFY3-215	ENST00000515479	SLC4A4	Q9Y6R1	1079 aa		4.79	□□□□□ -1.64
RUFY3-215	ENST00000515479	CDHR2	Q9BYE9	1310 aa		4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479	ZNF541	Q9H0D2	1346 aa		4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479	SCN7A	Q01118	1682 aa		4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479	TRBV5-7	A0A0A0MS05	114 aa		4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479	SAC3D1	A6NKF1	404 aa		4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479	SLC38A8	A6NNN8	435 aa		4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479		I6L893	689 aa	Predicted RBP	4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479	PPM1G	O15355	546 aa	Predicted RBP	4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479	DNPH1	O43598	174 aa		4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479	PLA2G6	O60733	806 aa		4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479	STARD3NL	O95772	234 aa		4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479	IGKV3-20	P01619	116 aa		4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479	COMP	P49747	757 aa	Predicted RBP	4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479	RHAG	Q02094	409 aa		4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479	FSCB	Q5H9T9	825 aa		4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479	RGMB	Q6NW40	437 aa		4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479	FBXO46	Q6PJ61	603 aa	Predicted RBP	4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479	C11orf96	Q7Z7L8	435 aa		4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479	ITPRIP	Q8IWB1	547 aa		4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479	KIAA1191	Q96A73	305 aa		4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479	CCDC138	Q96M89	665 aa		4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479	SLITRK1	Q96PX8	696 aa		4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479	PSMD1	Q99460	953 aa		4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479	THUMPD2	Q9BTF0	503 aa	Known RBP	4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479	FRMD8	Q9BZ67	464 aa	Predicted RBP	4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479	RWDD1	Q9H446	243 aa	Predicted RBP	4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479	ACTR5	Q9H9F9	607 aa	Predicted RBP	4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479	ICAM5	Q9UMF0	924 aa		4.78	□□□□□ -1.64
RUFY3-215	ENST00000515479	CKAP5	Q14008	2032 aa		4.78	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms