RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 DNASE2BQ8WZ79 361 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 HSPA12BQ96MM6 686 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 IL12RB2Q99665 862 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 C6orf106Q9H6K1 298 aaPredicted RBP14.43□□□□□ -0.1
NUP54-216ENST00000514901 NT5MQ9NPB1 228 aa14.43□□□□□ -0.1
NUP54-216ENST00000514901 SAE1Q9UBE0 346 aaPredicted RBP14.43□□□□□ -0.1
NUP54-216ENST00000514901 FAM47DPA6NHR8 397 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 PLK4O00444 970 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 SOCS5O75159 536 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 GNSP15586 552 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 PECAM1P16284 738 aaPredicted RBP14.42□□□□□ -0.1
NUP54-216ENST00000514901 RGRP47804 291 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 ITKQ08881 620 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 ZNF211Q13398 564 aaPredicted RBP14.42□□□□□ -0.1
NUP54-216ENST00000514901 PRKD1Q15139 912 aaPredicted RBP14.42□□□□□ -0.1
NUP54-216ENST00000514901 ALG1LQ6GMV1 187 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 TTC7BQ86TV6 843 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 RGL4Q8IZJ4 473 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 PGBD5Q8N414 524 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 CEP76Q8TAP6 659 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 SPOCK2Q92563 424 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 PIGKQ92643 395 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 VOPP1Q96AW1 172 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 HAUS1Q96CS2 278 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 FEM1CQ96JP0 617 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 VAT1Q99536 393 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 HINFPQ9BQA5 517 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 CARD9Q9H257 536 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 ARRDC1-AS1Q9H2J1 176 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 VPS45Q9NRW7 570 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 SUSD2Q9UGT4 822 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 PILRBQ9UKJ0 227 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 ATP8A1Q9Y2Q0 1164 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.42□□□□□ -0.1
NUP54-216ENST00000514901 JRKLQ9Y4A0 524 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 FRYLO94915 3013 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 RALGAPA1Q6GYQ0 2036 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 GVINP1Q7Z2Y8 2422 aa14.42□□□□□ -0.1
NUP54-216ENST00000514901 KNL1Q8NG31 2342 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 TSPAN11A1L157 253 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 PRR5-ARHGAP8B1AHC4 643 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 C10orf142B7Z368 130 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 KCNK1O00180 336 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 RNF103O00237 685 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 TSPAN6O43657 245 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 KIF5CO60282 957 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 FSBPO95073 299 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 PIGNO95427 931 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 TIMP2P16035 220 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 XPAP23025 273 aaPredicted RBP14.41□□□□□ -0.1
NUP54-216ENST00000514901 ITPKAP23677 461 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 NFKBIAP25963 317 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 MPLP40238 635 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 TAS2R38P59533 333 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 MAXP61244 160 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 NOMO1Q15155 1222 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 TEX44Q53QW1 395 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 SLC45A4Q5BKX6 768 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 PLA2G2CQ5R387 149 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 PEAR1Q5VY43 1037 aaPredicted RBP14.41□□□□□ -0.1
NUP54-216ENST00000514901 PARS2Q7L3T8 475 aaKnown RBP14.41□□□□□ -0.1
NUP54-216ENST00000514901 ARMCX6Q7L4S7 300 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 PRPF39Q86UA1 669 aaKnown RBP14.41□□□□□ -0.1
NUP54-216ENST00000514901 ZC3H18Q86VM9 953 aaKnown RBP14.41□□□□□ -0.1
NUP54-216ENST00000514901 TRIM69Q86WT6 500 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 CAMK1DQ8IU85 385 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 ACTL9Q8TC94 416 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 BIRC7Q96CA5 298 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 SEMA3CQ99985 751 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 NOD2Q9HC29 1040 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 TRMT1Q9NXH9 659 aaKnown RBP14.41□□□□□ -0.1
NUP54-216ENST00000514901 FADS3Q9Y5Q0 445 aa14.41□□□□□ -0.1
NUP54-216ENST00000514901 H7C0C1 242 aa14.4□□□□□ -0.1
NUP54-216ENST00000514901 NEMP1O14524 444 aa14.4□□□□□ -0.1
NUP54-216ENST00000514901 TRAFD1O14545 582 aaPredicted RBP14.4□□□□□ -0.1
NUP54-216ENST00000514901 KCNK3O14649 394 aa14.4□□□□□ -0.1
NUP54-216ENST00000514901 HTRA2O43464 458 aaPredicted RBP14.4□□□□□ -0.1
NUP54-216ENST00000514901 PCDH8O95206 1070 aa14.4□□□□□ -0.1
NUP54-216ENST00000514901 HLA-DQB2P05538 268 aa14.4□□□□□ -0.1
NUP54-216ENST00000514901 SERPINF2P08697 491 aa14.4□□□□□ -0.1
NUP54-216ENST00000514901 ZNF806P0C7X5 589 aa14.4□□□□□ -0.1
NUP54-216ENST00000514901 CA4P22748 312 aa14.4□□□□□ -0.1
NUP54-216ENST00000514901 CD27P26842 260 aa14.4□□□□□ -0.1
NUP54-216ENST00000514901 ATP5OP48047 213 aa14.4□□□□□ -0.1
NUP54-216ENST00000514901 RPS21P63220 83 aaKnown RBP14.4□□□□□ -0.1
NUP54-216ENST00000514901 OTUD4Q01804 1114 aaKnown RBP14.4□□□□□ -0.1
NUP54-216ENST00000514901 ELP6Q0PNE2 266 aa14.4□□□□□ -0.1
NUP54-216ENST00000514901 KLF1Q13351 362 aaPredicted RBP14.4□□□□□ -0.1
NUP54-216ENST00000514901 UGP2Q16851 508 aa14.4□□□□□ -0.1
NUP54-216ENST00000514901 DUOXA1Q1HG43 343 aa14.4□□□□□ -0.1
NUP54-216ENST00000514901 KIAA1161Q6NSJ0 714 aa14.4□□□□□ -0.1
NUP54-216ENST00000514901 AADACL2Q6P093 401 aa14.4□□□□□ -0.1
NUP54-216ENST00000514901 HORMAD1Q86X24 394 aa14.4□□□□□ -0.1
NUP54-216ENST00000514901 CDKL3Q8IVW4 592 aaPredicted RBP14.4□□□□□ -0.1
NUP54-216ENST00000514901 PAF1Q8N7H5 531 aa14.4□□□□□ -0.1
NUP54-216ENST00000514901 LRRN4Q8WUT4 740 aa14.4□□□□□ -0.1
NUP54-216ENST00000514901 SNX19Q92543 992 aa14.4□□□□□ -0.1
NUP54-216ENST00000514901 ECHDC3Q96DC8 303 aa14.4□□□□□ -0.1
NUP54-216ENST00000514901 QKIQ96PU8 341 aaKnown RBP eCLIP14.4□□□□□ -0.1
NUP54-216ENST00000514901 HERPUD2Q9BSE4 406 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms