RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 GRIK3Q13003 919 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 TRAF1Q13077 416 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 ERV3-1Q14264 604 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 LPIN1Q14693 890 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 VEPH1Q14D04 833 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 PLEKHO1Q53GL0 409 aaPredicted RBP5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 TRAPPC11Q7Z392 1133 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 CPLX4Q7Z7G2 160 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 NOXA1Q86UR1 476 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 RBFAQ8N0V3 343 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 TEX45Q8NA69 505 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 GABPB2Q8TAK5 448 aaPredicted RBP5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 VOPP1Q96AW1 172 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 PABPC5Q96DU9 382 aaKnown RBP5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 URB1-AS1Q96HZ7 61 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 NLRP4Q96MN2 994 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 ISCUQ9H1K1 167 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 PDCL3Q9H2J4 239 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 BLOC1S4Q9NUP1 217 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 MKLN1Q9UL63 735 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 A4GNTQ9UNA3 340 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 ITIH6Q6UXX5 1313 aa5.38□□□□□ -1.55
HMGCS1-207ENST00000514610 PCSK5Q92824 1860 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 LDB2O43679 373 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 KLK8O60259 260 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 ATP2C2O75185 946 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 TMEM191BP0C7N4 346 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 PSG1P11464 419 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 HOXB2P14652 356 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 ZNF8P17098 575 aaPredicted RBP5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 MAPK4P31152 587 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 THPOP40225 353 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 NR4A2P43354 598 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 POLD2P49005 469 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 RASSF2P50749 326 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 EIF3BP55884 814 aaKnown RBP5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 P2RX3P56373 397 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 HDAC4P56524 1084 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 RPS3AP61247 264 aaKnown RBP5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 FAM27E3Q08E93 113 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 TMEM115Q12893 351 aaPredicted RBP5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 RUNX2Q13950 521 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 ALG11Q2TAA5 492 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 PRTGQ2VWP7 1150 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 ZNF284Q2VY69 593 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 ESCO2Q56NI9 601 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 PRAMEF19Q5SWL8 479 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 HYIQ5T013 277 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 SNX30Q5VWJ9 437 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 CES5AQ6NT32 575 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 CDC73Q6P1J9 531 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 TMED8Q6PL24 325 aaPredicted RBP5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 COLCA1Q6ZS62 124 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 IRF2BP2Q7Z5L9 587 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 PXKQ7Z7A4 578 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 TDRPQ86YL5 185 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 DENND6AQ8IWF6 608 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 GJC3Q8NFK1 279 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 APOLD1Q96LR9 279 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 BBS4Q96RK4 519 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 CHCHD6Q9BRQ6 235 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 CDT1Q9H211 546 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 PLEKHA4Q9H4M7 779 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 SCPEP1Q9HB40 452 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 ANKRD10Q9NXR5 420 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 NCKIPSDQ9NZQ3 722 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 NDRG3Q9UGV2 375 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 INTS6Q9UL03 887 aaKnown RBP5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 CARD8Q9Y2G2 431 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 PSAT1Q9Y617 370 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 SCINQ9Y6U3 715 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 A3GALT2U3KPV4 340 aa5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 TDRD9Q8NDG6 1382 aaKnown RBP5.37□□□□□ -1.55
HMGCS1-207ENST00000514610 TYW5A2RUC4 315 aaKnown RBP5.36□□□□□ -1.55
HMGCS1-207ENST00000514610 LIASO43766 372 aa5.36□□□□□ -1.55
HMGCS1-207ENST00000514610 DDX58O95786 925 aaKnown RBP5.36□□□□□ -1.55
HMGCS1-207ENST00000514610 ITGAXP20702 1163 aa5.36□□□□□ -1.55
HMGCS1-207ENST00000514610 CHMP24386 653 aa5.36□□□□□ -1.55
HMGCS1-207ENST00000514610 PBX3P40426 434 aa5.36□□□□□ -1.55
HMGCS1-207ENST00000514610 PPATQ06203 517 aa5.36□□□□□ -1.55
HMGCS1-207ENST00000514610 PPP2R5BQ15173 497 aa5.36□□□□□ -1.55
HMGCS1-207ENST00000514610 LEXMQ3ZCV2 418 aa5.36□□□□□ -1.55
HMGCS1-207ENST00000514610 NCAPH2Q6IBW4 605 aa5.36□□□□□ -1.55
HMGCS1-207ENST00000514610 Q6ZSV7 163 aa5.36□□□□□ -1.55
HMGCS1-207ENST00000514610 C7orf57Q8NEG2 295 aa5.36□□□□□ -1.55
HMGCS1-207ENST00000514610 ETNPPLQ8TBG4 499 aa5.36□□□□□ -1.55
HMGCS1-207ENST00000514610 SLC35F5Q8WV83 523 aa5.36□□□□□ -1.55
HMGCS1-207ENST00000514610 LPAR1Q92633 364 aa5.36□□□□□ -1.55
HMGCS1-207ENST00000514610 SNAPC3Q92966 411 aa5.36□□□□□ -1.55
HMGCS1-207ENST00000514610 VCPIP1Q96JH7 1222 aa5.36□□□□□ -1.55
HMGCS1-207ENST00000514610 ZNF48Q96MX3 618 aaPredicted RBP5.36□□□□□ -1.55
HMGCS1-207ENST00000514610 MXRA8Q9BRK3 442 aa5.36□□□□□ -1.55
HMGCS1-207ENST00000514610 ITPAQ9BY32 194 aa5.36□□□□□ -1.55
HMGCS1-207ENST00000514610 TKTL2Q9H0I9 626 aa5.36□□□□□ -1.55
HMGCS1-207ENST00000514610 POT1Q9NUX5 634 aa5.36□□□□□ -1.55
HMGCS1-207ENST00000514610 RNF7Q9UBF6 113 aa5.36□□□□□ -1.55
HMGCS1-207ENST00000514610 ZNF521Q96K83 1311 aa5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 PI4KAP2A4QPH2 592 aa5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 BECN2A8MW95 431 aa5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 SEC14L2O76054 403 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms