RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 UBXN1Q04323 297 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 TLE3Q04726 772 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 C1QBPQ07021 282 aaKnown RBP12.36□□□□□ -0.43
SNHG4-208ENST00000514110 SERINC3Q13530 473 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 C1orf61Q13536 156 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 CYTH1Q15438 398 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 INO80DQ53TQ3 878 aaPredicted RBP12.36□□□□□ -0.43
SNHG4-208ENST00000514110 EFHC2Q5JST6 749 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 PPP1R15BQ5SWA1 713 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 DNAJC24Q6P3W2 148 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 EFL1Q7Z2Z2 1120 aaKnown RBP12.36□□□□□ -0.43
SNHG4-208ENST00000514110 PHACTR4Q8IZ21 702 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 TP53I13Q8NBR0 393 aaPredicted RBP12.36□□□□□ -0.43
SNHG4-208ENST00000514110 MAPK15Q8TD08 544 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 CASKIN2Q8WXE0 1202 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 ARHGEF26Q96DR7 871 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 NAF1Q96HR8 494 aaKnown RBP12.36□□□□□ -0.43
SNHG4-208ENST00000514110 EXOC2Q96KP1 924 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 MCEEQ96PE7 176 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 IL12RB2Q99665 862 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 AGPAT1Q99943 283 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 WRAP53Q9BUR4 548 aaKnown RBP12.36□□□□□ -0.43
SNHG4-208ENST00000514110 EVA1BQ9NVM1 165 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 LHX3Q9UBR4 397 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 LIMA1Q9UHB6 759 aaKnown RBP12.36□□□□□ -0.43
SNHG4-208ENST00000514110 SALL4Q9UJQ4 1053 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 FZD10Q9ULW2 581 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 MFHAS1Q9Y4C4 1052 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 A0A1W2PNU3 283 aaPredicted RBP12.35□□□□□ -0.43
SNHG4-208ENST00000514110 WASH4PA8MWX3 477 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 TPP1O14773 563 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 CASC3O15234 703 aaKnown RBP12.35□□□□□ -0.43
SNHG4-208ENST00000514110 LZTS3O60299 673 aaPredicted RBP12.35□□□□□ -0.43
SNHG4-208ENST00000514110 TM7SF2O76062 418 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 PIGNO95427 931 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 IGSF6O95976 241 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 LSSP48449 732 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 THOP1P52888 689 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 ADKP55263 362 aaKnown RBP12.35□□□□□ -0.43
SNHG4-208ENST00000514110 YBEYP58557 167 aaPredicted RBP12.35□□□□□ -0.43
SNHG4-208ENST00000514110 RHOAP61586 193 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 OGDHQ02218 1023 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 RAD51Q06609 339 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 PTK2BQ14289 1009 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 ISXQ2M1V0 245 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 KLHL40Q2TBA0 621 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 PRRT3Q5FWE3 981 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 PERM1Q5SV97 790 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 CRTC1Q6UUV9 634 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 APTXQ7Z2E3 356 aaKnown RBP12.35□□□□□ -0.43
SNHG4-208ENST00000514110 CXorf40AQ8TE69 158 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 BTN2A2Q8WVV5 523 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 HIC2Q96JB3 615 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 ZNF578Q96N58 590 aaPredicted RBP12.35□□□□□ -0.43
SNHG4-208ENST00000514110 EPAS1Q99814 870 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 LRRC61Q9BV99 259 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 BOCQ9BWV1 1114 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 CLPBQ9H078 707 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 POLR1BQ9H9Y6 1135 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 SPASTQ9UBP0 616 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 DKK3Q9UBP4 350 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 APOBEC3BQ9UH17 382 aaKnown RBP12.35□□□□□ -0.43
SNHG4-208ENST00000514110 COQ6Q9Y2Z9 468 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 SHROOM3Q8TF72 1996 aa12.35□□□□□ -0.43
SNHG4-208ENST00000514110 EME2A4GXA9 379 aaPredicted RBP12.34□□□□□ -0.43
SNHG4-208ENST00000514110 LMO7DNF2Z398 122 aa12.34□□□□□ -0.43
SNHG4-208ENST00000514110 MUSKO15146 869 aa12.34□□□□□ -0.43
SNHG4-208ENST00000514110 ATXN7O15265 892 aaPredicted RBP12.34□□□□□ -0.43
SNHG4-208ENST00000514110 DXOO77932 396 aaKnown RBP12.34□□□□□ -0.43
SNHG4-208ENST00000514110 CELA2BP08218 269 aaPredicted RBP12.34□□□□□ -0.43
SNHG4-208ENST00000514110 EIF4A3P38919 411 aaKnown RBP12.34□□□□□ -0.43
SNHG4-208ENST00000514110 PCBP4P57723 403 aaKnown RBP12.34□□□□□ -0.43
SNHG4-208ENST00000514110 YPEL5P62699 121 aa12.34□□□□□ -0.43
SNHG4-208ENST00000514110 MYL5Q02045 173 aa12.34□□□□□ -0.43
SNHG4-208ENST00000514110 IRF4Q15306 451 aa12.34□□□□□ -0.43
SNHG4-208ENST00000514110 NR0B2Q15466 257 aa12.34□□□□□ -0.43
SNHG4-208ENST00000514110 PARP15Q460N3 678 aa12.34□□□□□ -0.43
SNHG4-208ENST00000514110 TMEM52BQ4KMG9 183 aa12.34□□□□□ -0.43
SNHG4-208ENST00000514110 FAXCQ5TGI0 409 aa12.34□□□□□ -0.43
SNHG4-208ENST00000514110 MACC1Q6ZN28 852 aa12.34□□□□□ -0.43
SNHG4-208ENST00000514110 SLC35F3Q8IY50 421 aa12.34□□□□□ -0.43
SNHG4-208ENST00000514110 MCOLN2Q8IZK6 566 aa12.34□□□□□ -0.43
SNHG4-208ENST00000514110 UMODL1-AS1Q8N2C9 162 aa12.34□□□□□ -0.43
SNHG4-208ENST00000514110 ZNF248Q8NDW4 579 aa12.34□□□□□ -0.43
SNHG4-208ENST00000514110 ANKRD20A12PQ8NF67 263 aa12.34□□□□□ -0.43
SNHG4-208ENST00000514110 ERGIC2Q96RQ1 377 aa12.34□□□□□ -0.43
SNHG4-208ENST00000514110 LGMNQ99538 433 aa12.34□□□□□ -0.43
SNHG4-208ENST00000514110 CNPY3Q9BT09 278 aa12.34□□□□□ -0.43
SNHG4-208ENST00000514110 CPEB1Q9BZB8 566 aaKnown RBP12.34□□□□□ -0.43
SNHG4-208ENST00000514110 HSD3B7Q9H2F3 369 aa12.34□□□□□ -0.43
SNHG4-208ENST00000514110 CATSPERBQ9H7T0 1116 aa12.34□□□□□ -0.43
SNHG4-208ENST00000514110 ASCL3Q9NQ33 180 aa12.34□□□□□ -0.43
SNHG4-208ENST00000514110 GPATCH2LQ9NWQ4 482 aa12.34□□□□□ -0.43
SNHG4-208ENST00000514110 TAS2R14Q9NYV8 317 aa12.34□□□□□ -0.43
SNHG4-208ENST00000514110 NCKIPSDQ9NZQ3 722 aa12.34□□□□□ -0.43
SNHG4-208ENST00000514110 SATB2Q9UPW6 733 aa12.34□□□□□ -0.43
SNHG4-208ENST00000514110 TSPAN11A1L157 253 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 PMS2P1A4D2B8 440 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 ANKRD62A6NC57 917 aa12.33□□□□□ -0.44
SNHG4-208ENST00000514110 LRRC10BA6NIK2 292 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms