RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 SNNO75324 88 aaPredicted RBP15.08■□□□□ 0
VCAN-211ENST00000513984 C2P06681 752 aa15.08■□□□□ 0
VCAN-211ENST00000513984 PFKLP17858 780 aa15.08■□□□□ 0
VCAN-211ENST00000513984 CES1P23141 567 aa15.08■□□□□ 0
VCAN-211ENST00000513984 CDC25CP30307 473 aa15.08■□□□□ 0
VCAN-211ENST00000513984 MAGEA9P43362 315 aa15.08■□□□□ 0
VCAN-211ENST00000513984 SCTRP47872 440 aa15.08■□□□□ 0
VCAN-211ENST00000513984 LIG3P49916 1009 aa15.08■□□□□ 0
VCAN-211ENST00000513984 TMPRSS15P98073 1019 aa15.08■□□□□ 0
VCAN-211ENST00000513984 MPP1Q00013 466 aa15.08■□□□□ 0
VCAN-211ENST00000513984 OCRLQ01968 901 aa15.08■□□□□ 0
VCAN-211ENST00000513984 LAMB3Q13751 1172 aa15.08■□□□□ 0
VCAN-211ENST00000513984 CES4AQ5XG92 561 aa15.08■□□□□ 0
VCAN-211ENST00000513984 ZNF470Q6ECI4 717 aa15.08■□□□□ 0
VCAN-211ENST00000513984 NEPROQ6NW34 567 aa15.08■□□□□ 0
VCAN-211ENST00000513984 GALNT7Q86SF2 657 aa15.08■□□□□ 0
VCAN-211ENST00000513984 HS6ST3Q8IZP7 471 aa15.08■□□□□ 0
VCAN-211ENST00000513984 FITM2Q8N6M3 262 aa15.08■□□□□ 0
VCAN-211ENST00000513984 ACVR1CQ8NER5 493 aa15.08■□□□□ 0
VCAN-211ENST00000513984 GABPB2Q8TAK5 448 aaPredicted RBP15.08■□□□□ 0
VCAN-211ENST00000513984 TCF25Q9BQ70 676 aa15.08■□□□□ 0
VCAN-211ENST00000513984 EMILIN2Q9BXX0 1053 aa15.08■□□□□ 0
VCAN-211ENST00000513984 TRIM55Q9BYV6 548 aa15.08■□□□□ 0
VCAN-211ENST00000513984 MUC3BQ9H195 1237 aa15.08■□□□□ 0
VCAN-211ENST00000513984 CAB39LQ9H9S4 337 aa15.08■□□□□ 0
VCAN-211ENST00000513984 TMEM216Q9P0N5 145 aa15.08■□□□□ 0
VCAN-211ENST00000513984 NOTCH4Q99466 2003 aa15.07■□□□□ 0
VCAN-211ENST00000513984 TYW5A2RUC4 315 aaKnown RBP15.07■□□□□ 0
VCAN-211ENST00000513984 CBX4O00257 560 aa15.07■□□□□ 0
VCAN-211ENST00000513984 SLC7A4O43246 635 aa15.07■□□□□ 0
VCAN-211ENST00000513984 LDB2O43679 373 aa15.07■□□□□ 0
VCAN-211ENST00000513984 UBOX5O94941 541 aa15.07■□□□□ 0
VCAN-211ENST00000513984 LUC7L3O95232 432 aaKnown RBP15.07■□□□□ 0
VCAN-211ENST00000513984 NDST3O95803 873 aa15.07■□□□□ 0
VCAN-211ENST00000513984 ALDH3A1P30838 453 aa15.07■□□□□ 0
VCAN-211ENST00000513984 RGRP47804 291 aa15.07■□□□□ 0
VCAN-211ENST00000513984 ERVFC1P60507 584 aa15.07■□□□□ 0
VCAN-211ENST00000513984 ARF5P84085 180 aa15.07■□□□□ 0
VCAN-211ENST00000513984 ACVR1Q04771 509 aa15.07■□□□□ 0
VCAN-211ENST00000513984 OVGP1Q12889 678 aa15.07■□□□□ 0
VCAN-211ENST00000513984 CTBP1Q13363 440 aa15.07■□□□□ 0
VCAN-211ENST00000513984 PCLAFQ15004 111 aa15.07■□□□□ 0
VCAN-211ENST00000513984 CYTH1Q15438 398 aa15.07■□□□□ 0
VCAN-211ENST00000513984 DLG2Q15700 870 aa15.07■□□□□ 0
VCAN-211ENST00000513984 FASTKD1Q53R41 847 aaKnown RBP15.07■□□□□ 0
VCAN-211ENST00000513984 LCA5Q86VQ0 697 aa15.07■□□□□ 0
VCAN-211ENST00000513984 PLD6Q8N2A8 252 aaKnown RBP15.07■□□□□ 0
VCAN-211ENST00000513984 ELMOD1Q8N336 334 aa15.07■□□□□ 0
VCAN-211ENST00000513984 MAB21L3Q8N8X9 362 aa15.07■□□□□ 0
VCAN-211ENST00000513984 NOD2Q9HC29 1040 aa15.07■□□□□ 0
VCAN-211ENST00000513984 LSM7Q9UK45 103 aaKnown RBP15.07■□□□□ 0
VCAN-211ENST00000513984 FBXO5Q9UKT4 447 aa15.07■□□□□ 0
VCAN-211ENST00000513984 SLC39A10Q9ULF5 831 aa15.07■□□□□ 0
VCAN-211ENST00000513984 RIMKLBQ9ULI2 386 aa15.07■□□□□ 0
VCAN-211ENST00000513984 ANKRD6Q9Y2G4 727 aa15.07■□□□□ 0
VCAN-211ENST00000513984 ZNF510Q9Y2H8 683 aa15.07■□□□□ 0
VCAN-211ENST00000513984 BPTFQ12830 3046 aa15.07■□□□□ 0
VCAN-211ENST00000513984 CCDC195A0A1B0GUA6 201 aa15.06■□□□□ 0
VCAN-211ENST00000513984 H0Y626 953 aa15.06■□□□□ 0
VCAN-211ENST00000513984 INSIG1O15503 277 aa15.06■□□□□ 0
VCAN-211ENST00000513984 ZMPSTE24O75844 475 aa15.06■□□□□ 0
VCAN-211ENST00000513984 DCTN3O75935 186 aa15.06■□□□□ 0
VCAN-211ENST00000513984 CD160O95971 181 aa15.06■□□□□ 0
VCAN-211ENST00000513984 GLUD1P00367 558 aa15.06■□□□□ 0
VCAN-211ENST00000513984 CKMP06732 381 aa15.06■□□□□ 0
VCAN-211ENST00000513984 DNAJB1P25685 340 aa15.06■□□□□ 0
VCAN-211ENST00000513984 BMPR1AP36894 532 aa15.06■□□□□ 0
VCAN-211ENST00000513984 GMPRP36959 345 aa15.06■□□□□ 0
VCAN-211ENST00000513984 CD151P48509 253 aa15.06■□□□□ 0
VCAN-211ENST00000513984 IRX4P78413 519 aa15.06■□□□□ 0
VCAN-211ENST00000513984 FSCBQ5H9T9 825 aa15.06■□□□□ 0
VCAN-211ENST00000513984 MBLAC2Q68D91 279 aa15.06■□□□□ 0
VCAN-211ENST00000513984 HTR3DQ70Z44 454 aa15.06■□□□□ 0
VCAN-211ENST00000513984 CPXM2Q8N436 756 aa15.06■□□□□ 0
VCAN-211ENST00000513984 CARNMT1Q8N4J0 409 aa15.06■□□□□ 0
VCAN-211ENST00000513984 RFWD2Q8NHY2 731 aa15.06■□□□□ 0
VCAN-211ENST00000513984 HERVK_113Q902F9 699 aa15.06■□□□□ 0
VCAN-211ENST00000513984 TMA16Q96EY4 203 aaKnown RBP15.06■□□□□ 0
VCAN-211ENST00000513984 NUDCD1Q96RS6 583 aa15.06■□□□□ 0
VCAN-211ENST00000513984 MFSD1Q9H3U5 465 aa15.06■□□□□ 0
VCAN-211ENST00000513984 ZNF358Q9NW07 568 aa15.06■□□□□ 0
VCAN-211ENST00000513984 COPG2Q9UBF2 871 aa15.06■□□□□ 0
VCAN-211ENST00000513984 ARIH1Q9Y4X5 557 aaPredicted RBP15.06■□□□□ 0
VCAN-211ENST00000513984 OR51B4Q9Y5P0 310 aa15.06■□□□□ 0
VCAN-211ENST00000513984 TRAV19A0A0A6YYK7 116 aa15.06■□□□□ 0
VCAN-211ENST00000513984 FAM95CA0A1B0GW59 222 aa15.06■□□□□ 0
VCAN-211ENST00000513984 LCHNA4D1U4 455 aa15.06■□□□□ 0
VCAN-211ENST00000513984 C2orf71A6NGG8 1288 aa15.06■□□□□ 0
VCAN-211ENST00000513984 SCAMP3O14828 347 aaKnown RBP15.06■□□□□ 0
VCAN-211ENST00000513984 DLDP09622 509 aaKnown RBP15.06■□□□□ 0
VCAN-211ENST00000513984 FGF3P11487 239 aaPredicted RBP15.06■□□□□ 0
VCAN-211ENST00000513984 CTNNB1P35222 781 aa15.06■□□□□ 0
VCAN-211ENST00000513984 IRF9Q00978 393 aa15.06■□□□□ 0
VCAN-211ENST00000513984 NSUN2Q08J23 767 aaKnown RBP eCLIP15.06■□□□□ 0
VCAN-211ENST00000513984 BNIP1Q12981 228 aa15.06■□□□□ 0
VCAN-211ENST00000513984 GALNT3Q14435 633 aa15.06■□□□□ 0
VCAN-211ENST00000513984 USP10Q14694 798 aaKnown RBP15.06■□□□□ 0
VCAN-211ENST00000513984 LMNTD2Q8IXW0 634 aa15.06■□□□□ 0
VCAN-211ENST00000513984 PHOSPHO2Q8TCD6 241 aa15.06■□□□□ 0
VCAN-211ENST00000513984 BRSK1Q8TDC3 778 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms