RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 ASCC3Q8N3C0 2202 aaKnown RBP6.58□□□□□ -1.36
KDM3B-208ENST00000512928 TMEM131Q92545 1883 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 AKAP13Q12802 2813 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 CXorf51AA0A1B0GTR3 108 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 SSU72P8A0A1W2PR75 194 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 FPGTO14772 594 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 YKT6O15498 198 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 FFAR2O15552 330 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 PCDHGA12O60330 932 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 MMP20O60882 483 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 NEBLO76041 1014 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 LCA5LO95447 670 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 LDOC1O95751 146 aaPredicted RBP6.58□□□□□ -1.36
KDM3B-208ENST00000512928 PRKCGP05129 697 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 H2AFZP0C0S5 128 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 ATXN1LP0C7T5 689 aaKnown RBP6.58□□□□□ -1.36
KDM3B-208ENST00000512928 RARAP10276 462 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 TNNT1P13805 278 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 EPHA8P29322 1005 aaPredicted RBP6.58□□□□□ -1.36
KDM3B-208ENST00000512928 SERPINA4P29622 427 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 SERPINB6P35237 376 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 SCNN1BP51168 640 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 ZNF135P52742 658 aaPredicted RBP6.58□□□□□ -1.36
KDM3B-208ENST00000512928 THOP1P52888 689 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 CDH6P55285 790 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 SHC2P98077 582 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 SEMG2Q02383 582 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 BCL2L1Q07817 233 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 IL10RBQ08334 325 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 OVGP1Q12889 678 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 BNIP3Q12983 259 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 DPYSQ14117 519 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 ZNF235Q14590 738 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 MESDQ14696 234 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 LBRQ14739 615 aaKnown RBP6.58□□□□□ -1.36
KDM3B-208ENST00000512928 DPYSL2Q16555 572 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 SLC18A3Q16572 532 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 BOLA3Q53S33 107 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 ODF2Q5BJF6 829 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 ZNF542PQ5EBM4 170 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 TXNRD3NBQ6F5E7 133 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 ERAP2Q6P179 960 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 UNQ6494/PRO21346Q6UXR6 183 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 GCNT7Q6ZNI0 430 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 Q6ZSR6 202 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 CYP4V2Q6ZWL3 525 aaPredicted RBP6.58□□□□□ -1.36
KDM3B-208ENST00000512928 H2AFVQ71UI9 128 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 IQCHQ86VS3 1027 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 CAMK1DQ8IU85 385 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 PLPP6Q8IY26 295 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 ATPAF2Q8N5M1 289 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.58□□□□□ -1.36
KDM3B-208ENST00000512928 KCTD6Q8NC69 237 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 TSEN2Q8NCE0 465 aaKnown RBP6.58□□□□□ -1.36
KDM3B-208ENST00000512928 PDCD6IPQ8WUM4 868 aaKnown RBP6.58□□□□□ -1.36
KDM3B-208ENST00000512928 NSMCE1Q8WV22 266 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 RAB7BQ96AH8 199 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 CNDP2Q96KP4 475 aaKnown RBP6.58□□□□□ -1.36
KDM3B-208ENST00000512928 CSPG4P5Q96PW8 444 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 ATP13A3Q9H7F0 1226 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 GRPEL1Q9HAV7 217 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 PDFQ9HBH1 243 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 PCDH18Q9HCL0 1135 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 SPTLC3Q9NUV7 552 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 ETNK2Q9NVF9 386 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 DNAJC28Q9NX36 388 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 TTLL3Q9Y4R7 772 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 ASPMQ8IZT6 3477 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 BAHCC1Q9P281 2608 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 PI4KAP42356 2102 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 SPEGQ15772 3267 aa6.58□□□□□ -1.36
KDM3B-208ENST00000512928 IGF2RP11717 2491 aa6.57□□□□□ -1.36
KDM3B-208ENST00000512928 TP53BP1Q12888 1972 aaPredicted RBP6.57□□□□□ -1.36
KDM3B-208ENST00000512928 TTC24A2A3L6 582 aaPredicted RBP6.57□□□□□ -1.36
KDM3B-208ENST00000512928 POM121BA6NF01 834 aa6.57□□□□□ -1.36
KDM3B-208ENST00000512928 A8MX80 341 aa6.57□□□□□ -1.36
KDM3B-208ENST00000512928 AKR1B15C9JRZ8 316 aaPredicted RBP6.57□□□□□ -1.36
KDM3B-208ENST00000512928 H3BM21 787 aa6.57□□□□□ -1.36
KDM3B-208ENST00000512928 RAD51BO15315 384 aa6.57□□□□□ -1.36
KDM3B-208ENST00000512928 TNFSF14O43557 240 aa6.57□□□□□ -1.36
KDM3B-208ENST00000512928 AP1G1O43747 822 aa6.57□□□□□ -1.36
KDM3B-208ENST00000512928 LZTS3O60299 673 aaPredicted RBP6.57□□□□□ -1.36
KDM3B-208ENST00000512928 CBFA2T3O75081 653 aa6.57□□□□□ -1.36
KDM3B-208ENST00000512928 TM7SF2O76062 418 aa6.57□□□□□ -1.36
KDM3B-208ENST00000512928 PROSCO94903 275 aa6.57□□□□□ -1.36
KDM3B-208ENST00000512928 MAP3K6O95382 1288 aa6.57□□□□□ -1.36
KDM3B-208ENST00000512928 CD48P09326 243 aa6.57□□□□□ -1.36
KDM3B-208ENST00000512928 TIMP2P16035 220 aa6.57□□□□□ -1.36
KDM3B-208ENST00000512928 ITIH2P19823 946 aa6.57□□□□□ -1.36
KDM3B-208ENST00000512928 RABIFP47224 123 aa6.57□□□□□ -1.36
KDM3B-208ENST00000512928 RGRP47804 291 aa6.57□□□□□ -1.36
KDM3B-208ENST00000512928 HCAR3P49019 387 aa6.57□□□□□ -1.36
KDM3B-208ENST00000512928 DAB2P98082 770 aa6.57□□□□□ -1.36
KDM3B-208ENST00000512928 SLC25A11Q02978 314 aaKnown RBP6.57□□□□□ -1.36
KDM3B-208ENST00000512928 ITKQ08881 620 aa6.57□□□□□ -1.36
KDM3B-208ENST00000512928 SLC10A7Q0GE19 358 aa6.57□□□□□ -1.36
KDM3B-208ENST00000512928 ELP6Q0PNE2 266 aa6.57□□□□□ -1.36
KDM3B-208ENST00000512928 MMRN1Q13201 1228 aa6.57□□□□□ -1.36
KDM3B-208ENST00000512928 DNAJC3Q13217 504 aa6.57□□□□□ -1.36
KDM3B-208ENST00000512928 PDE1CQ14123 709 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms