RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 DYRK4Q9NR20 520 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 VANGL2Q9ULK5 521 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 STAP1Q9ULZ2 295 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 TBC1D30Q9Y2I9 924 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 CFAP46Q8IYW2 2715 aa7.36□□□□□ -1.23
USP46-208ENST00000512656 FAM149AA5PLN7 773 aa7.35□□□□□ -1.23
USP46-208ENST00000512656 EIF4E1BA6NMX2 242 aaKnown RBP7.35□□□□□ -1.23
USP46-208ENST00000512656 M0QYT0 321 aa7.35□□□□□ -1.23
USP46-208ENST00000512656 GADD45BO75293 160 aaPredicted RBP7.35□□□□□ -1.23
USP46-208ENST00000512656 RTN2O75298 545 aa7.35□□□□□ -1.23
USP46-208ENST00000512656 PAGE1O75459 146 aa7.35□□□□□ -1.23
USP46-208ENST00000512656 PRNPP04156 253 aa7.35□□□□□ -1.23
USP46-208ENST00000512656 RHOCP08134 193 aa7.35□□□□□ -1.23
USP46-208ENST00000512656 VAV1P15498 845 aa7.35□□□□□ -1.23
USP46-208ENST00000512656 PON1P27169 355 aa7.35□□□□□ -1.23
USP46-208ENST00000512656 MAP4P27816 1152 aaKnown RBP7.35□□□□□ -1.23
USP46-208ENST00000512656 MAT2AP31153 395 aaKnown RBP7.35□□□□□ -1.23
USP46-208ENST00000512656 RECQLP46063 649 aaPredicted RBP7.35□□□□□ -1.23
USP46-208ENST00000512656 UBE2HP62256 183 aa7.35□□□□□ -1.23
USP46-208ENST00000512656 PPP2CBP62714 309 aa7.35□□□□□ -1.23
USP46-208ENST00000512656 PPP2CAP67775 309 aa7.35□□□□□ -1.23
USP46-208ENST00000512656 CNTN1Q12860 1018 aa7.35□□□□□ -1.23
USP46-208ENST00000512656 COL9A2Q14055 689 aaPredicted RBP7.35□□□□□ -1.23
USP46-208ENST00000512656 ACAP1Q15027 740 aa7.35□□□□□ -1.23
USP46-208ENST00000512656 MAN2A1Q16706 1144 aa7.35□□□□□ -1.23
USP46-208ENST00000512656 COL28A1Q2UY09 1125 aa7.35□□□□□ -1.23
USP46-208ENST00000512656 C5orf22Q49AR2 442 aa7.35□□□□□ -1.23
USP46-208ENST00000512656 SETD3Q86TU7 594 aaPredicted RBP7.35□□□□□ -1.23
USP46-208ENST00000512656 SH2D3CQ8N5H7 860 aa7.35□□□□□ -1.23
USP46-208ENST00000512656 ATP11CQ8NB49 1132 aa7.35□□□□□ -1.23
USP46-208ENST00000512656 TMIEQ8NEW7 156 aa7.35□□□□□ -1.23
USP46-208ENST00000512656 ZNF397Q8NF99 534 aaPredicted RBP7.35□□□□□ -1.23
USP46-208ENST00000512656 HNRNPLLQ8WVV9 542 aaKnown RBP7.35□□□□□ -1.23
USP46-208ENST00000512656 ALG14Q96F25 216 aa7.35□□□□□ -1.23
USP46-208ENST00000512656 PPP1R16AQ96I34 528 aa7.35□□□□□ -1.23
USP46-208ENST00000512656 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.35□□□□□ -1.23
USP46-208ENST00000512656 DNAJC12Q9UKB3 198 aa7.35□□□□□ -1.23
USP46-208ENST00000512656 PPM1HQ9ULR3 514 aa7.35□□□□□ -1.23
USP46-208ENST00000512656 HS3ST2Q9Y278 367 aa7.35□□□□□ -1.23
USP46-208ENST00000512656 OR51B4Q9Y5P0 310 aa7.35□□□□□ -1.23
USP46-208ENST00000512656 HS3ST4Q9Y661 456 aa7.35□□□□□ -1.23
USP46-208ENST00000512656 A0A087WV48 116 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 FOXN3O00409 490 aaPredicted RBP7.34□□□□□ -1.23
USP46-208ENST00000512656 KPNA3O00505 521 aaPredicted RBP7.34□□□□□ -1.23
USP46-208ENST00000512656 WNT9AO14904 365 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 ICMTO60725 284 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 ERBB2P04626 1255 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 ALPPL2P10696 532 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 SRCP12931 536 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 CKMT2P17540 419 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 AKT2P31751 481 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 CHRNA3P32297 505 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 CXCR3P49682 368 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 ACADVLP49748 655 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 NUMBP49757 651 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 SULT1E1P49888 294 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 GP2P55259 537 aaKnown RBP7.34□□□□□ -1.23
USP46-208ENST00000512656 RNASE9P60153 205 aaKnown RBP7.34□□□□□ -1.23
USP46-208ENST00000512656 E2F1Q01094 437 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 DEUP1Q05D60 604 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 SLC20A2Q08357 652 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 DNAJC3Q13217 504 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 SHBQ15464 509 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 CAMK4Q16566 473 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 SLC25A52Q3SY17 297 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 PTPN20Q4JDL3 420 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 HP1BP3Q5SSJ5 553 aaPredicted RBP7.34□□□□□ -1.23
USP46-208ENST00000512656 AGBL4Q5VU57 503 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 SFMBT2Q5VUG0 894 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 HGSNATQ68CP4 663 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 RETSATQ6NUM9 610 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 ZNF783Q6ZMS7 281 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 C14orf80Q86SX3 495 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 SLC47A2Q86VL8 602 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 HORMAD1Q86X24 394 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 ERICH1Q86X53 443 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 DCP2Q8IU60 420 aaKnown RBP7.34□□□□□ -1.23
USP46-208ENST00000512656 IRF2BP1Q8IU81 584 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 CCNJLQ8IV13 435 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 GALNT12Q8IXK2 581 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 FAM71AQ8IYT1 594 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 DCAF4L2Q8NA75 395 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 C18orf8Q96DM3 657 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 PGAP3Q96FM1 320 aaPredicted RBP7.34□□□□□ -1.23
USP46-208ENST00000512656 LRIG1Q96JA1 1093 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 C1orf74Q96LT6 269 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 NPY6RQ99463 290 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 TKTL2Q9H0I9 626 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 ZFYVE1Q9HBF4 777 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 ARHGEF38Q9NXL2 777 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 ARHGAP20Q9P2F6 1191 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 SARDHQ9UL12 918 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 AK5Q9Y6K8 562 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 CELSR3Q9NYQ7 3312 aa7.34□□□□□ -1.23
USP46-208ENST00000512656 SETXQ7Z333 2677 aaKnown RBP7.34□□□□□ -1.24
USP46-208ENST00000512656 LOC400499M0QZD8 3231 aa7.33□□□□□ -1.24
USP46-208ENST00000512656 PTPRBP23467 1997 aa7.33□□□□□ -1.24
USP46-208ENST00000512656 PLXNB3Q9ULL4 1909 aa7.33□□□□□ -1.24
USP46-208ENST00000512656 A0A1W2PQU0 124 aa7.33□□□□□ -1.24
USP46-208ENST00000512656 ILVBLA1L0T0 632 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms