RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 TNFP01375 233 aa12.73□□□□□ -0.37
DDX41-215ENST00000512431 GNA15P30679 374 aa12.73□□□□□ -0.37
DDX41-215ENST00000512431 LRRC63Q05C16 580 aa12.73□□□□□ -0.37
DDX41-215ENST00000512431 POLD3Q15054 466 aaPredicted RBP12.73□□□□□ -0.37
DDX41-215ENST00000512431 KLHL40Q2TBA0 621 aa12.73□□□□□ -0.37
DDX41-215ENST00000512431 MAP9Q49MG5 647 aa12.73□□□□□ -0.37
DDX41-215ENST00000512431 CCDC40Q4G0X9 1142 aa12.73□□□□□ -0.37
DDX41-215ENST00000512431 C11orf57Q6ZUT1 292 aaPredicted RBP12.73□□□□□ -0.37
DDX41-215ENST00000512431 PIM3Q86V86 326 aa12.73□□□□□ -0.37
DDX41-215ENST00000512431 ARHGEF19Q8IW93 802 aa12.73□□□□□ -0.37
DDX41-215ENST00000512431 PLPP6Q8IY26 295 aa12.73□□□□□ -0.37
DDX41-215ENST00000512431 EHBP1Q8NDI1 1231 aa12.73□□□□□ -0.37
DDX41-215ENST00000512431 NKD1Q969G9 470 aa12.73□□□□□ -0.37
DDX41-215ENST00000512431 ISG20Q96AZ6 181 aaKnown RBP12.73□□□□□ -0.37
DDX41-215ENST00000512431 SPATA32Q96LK8 384 aa12.73□□□□□ -0.37
DDX41-215ENST00000512431 C1orf74Q96LT6 269 aa12.73□□□□□ -0.37
DDX41-215ENST00000512431 EPAS1Q99814 870 aa12.73□□□□□ -0.37
DDX41-215ENST00000512431 GTPBP4Q9BZE4 634 aaKnown RBP12.73□□□□□ -0.37
DDX41-215ENST00000512431 ZNF71Q9NQZ8 489 aaPredicted RBP12.73□□□□□ -0.37
DDX41-215ENST00000512431 MBNL1Q9NR56 388 aaKnown RBP12.73□□□□□ -0.37
DDX41-215ENST00000512431 IGSF5Q9NSI5 407 aa12.73□□□□□ -0.37
DDX41-215ENST00000512431 TMEM51Q9NW97 253 aa12.73□□□□□ -0.37
DDX41-215ENST00000512431 MPP6Q9NZW5 540 aa12.73□□□□□ -0.37
DDX41-215ENST00000512431 LRIT1Q9P2V4 623 aa12.73□□□□□ -0.37
DDX41-215ENST00000512431 CNTN6Q9UQ52 1028 aa12.73□□□□□ -0.37
DDX41-215ENST00000512431 ZNF891A8MT65 544 aaPredicted RBP12.72□□□□□ -0.37
DDX41-215ENST00000512431 ZW10O43264 779 aa12.72□□□□□ -0.37
DDX41-215ENST00000512431 SRGAP2O75044 1071 aa12.72□□□□□ -0.37
DDX41-215ENST00000512431 POP4O95707 220 aaKnown RBP12.72□□□□□ -0.37
DDX41-215ENST00000512431 F9P00740 461 aa12.72□□□□□ -0.37
DDX41-215ENST00000512431 UGT2B4P06133 528 aa12.72□□□□□ -0.37
DDX41-215ENST00000512431 HSP90AA1P07900 732 aaKnown RBP12.72□□□□□ -0.37
DDX41-215ENST00000512431 ETFBP38117 255 aa12.72□□□□□ -0.37
DDX41-215ENST00000512431 GEMIN4P57678 1058 aaKnown RBP12.72□□□□□ -0.37
DDX41-215ENST00000512431 SRP54P61011 504 aaKnown RBP12.72□□□□□ -0.37
DDX41-215ENST00000512431 SNRPD1P62314 119 aaKnown RBP12.72□□□□□ -0.37
DDX41-215ENST00000512431 LRRC14Q15048 493 aa12.72□□□□□ -0.37
DDX41-215ENST00000512431 ALG11Q2TAA5 492 aa12.72□□□□□ -0.37
DDX41-215ENST00000512431 ZNF658Q5TYW1 1059 aaPredicted RBP12.72□□□□□ -0.37
DDX41-215ENST00000512431 SPRED1Q7Z699 444 aa12.72□□□□□ -0.37
DDX41-215ENST00000512431 SLITRK4Q8IW52 837 aa12.72□□□□□ -0.37
DDX41-215ENST00000512431 TP53I13Q8NBR0 393 aaPredicted RBP12.72□□□□□ -0.37
DDX41-215ENST00000512431 CCDC112Q8NEF3 446 aa12.72□□□□□ -0.37
DDX41-215ENST00000512431 FAM46DQ8NEK8 389 aa12.72□□□□□ -0.37
DDX41-215ENST00000512431 GPR156Q8NFN8 814 aa12.72□□□□□ -0.37
DDX41-215ENST00000512431 OR6K2Q8NGY2 324 aa12.72□□□□□ -0.37
DDX41-215ENST00000512431 LMO3Q8TAP4 145 aa12.72□□□□□ -0.37
DDX41-215ENST00000512431 KLHL32Q96NJ5 620 aa12.72□□□□□ -0.37
DDX41-215ENST00000512431 TAAR9Q96RI9 348 aa12.72□□□□□ -0.37
DDX41-215ENST00000512431 CDH19Q9H159 772 aa12.72□□□□□ -0.37
DDX41-215ENST00000512431 SYNCQ9H7C4 482 aa12.72□□□□□ -0.37
DDX41-215ENST00000512431 ARHGEF38Q9NXL2 777 aa12.72□□□□□ -0.37
DDX41-215ENST00000512431 KLQ9UEF7 1012 aa12.72□□□□□ -0.37
DDX41-215ENST00000512431 STAP1Q9ULZ2 295 aa12.72□□□□□ -0.37
DDX41-215ENST00000512431 BSNQ9UPA5 3926 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 CXorf51AA0A1B0GTR3 108 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 AREL1O15033 823 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 CAPN5O15484 640 aaPredicted RBP12.71□□□□□ -0.37
DDX41-215ENST00000512431 DAB1O75553 588 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 ZMPSTE24O75844 475 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 XPAP23025 273 aaPredicted RBP12.71□□□□□ -0.37
DDX41-215ENST00000512431 GKP32189 559 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 CXCR3P49682 368 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 ARF5P84085 180 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 GNA12Q03113 381 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 DEUP1Q05D60 604 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 RAD51Q06609 339 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 NFATC4Q14934 902 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 IRF4Q15306 451 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 C14orf28Q4W4Y0 310 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 CERCAMQ5T4B2 595 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 GDPD4Q6W3E5 623 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 FAM183BPQ6ZVS7 135 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 TAF8Q7Z7C8 310 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 ZNF683Q8IZ20 524 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 OR2AP1Q8NGE2 309 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 KREMEN1Q96MU8 473 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 HAPLN3Q96S86 360 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 CPXM1Q96SM3 734 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 WRAP53Q9BUR4 548 aaKnown RBP12.71□□□□□ -0.37
DDX41-215ENST00000512431 SEMA6CQ9H3T2 930 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 UBE2TQ9NPD8 197 aaPredicted RBP12.71□□□□□ -0.37
DDX41-215ENST00000512431 PIGVQ9NUD9 493 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 HPCAL4Q9UM19 191 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 PLAAQ9Y263 795 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 SNX10Q9Y5X0 201 aa12.71□□□□□ -0.37
DDX41-215ENST00000512431 IGLV3-10A0A075B6K4 115 aa12.7□□□□□ -0.38
DDX41-215ENST00000512431 FAM237AA0A1B0GTK4 181 aa12.7□□□□□ -0.38
DDX41-215ENST00000512431 HGSO14964 777 aaPredicted RBP12.7□□□□□ -0.38
DDX41-215ENST00000512431 NUDT21O43809 227 aaKnown RBP12.7□□□□□ -0.38
DDX41-215ENST00000512431 ZNF202O95125 648 aa12.7□□□□□ -0.38
DDX41-215ENST00000512431 CPNE6O95741 557 aa12.7□□□□□ -0.38
DDX41-215ENST00000512431 CCL4P13236 92 aa12.7□□□□□ -0.38
DDX41-215ENST00000512431 LIFP15018 202 aa12.7□□□□□ -0.38
DDX41-215ENST00000512431 USP8P40818 1118 aa12.7□□□□□ -0.38
DDX41-215ENST00000512431 SULT1E1P49888 294 aa12.7□□□□□ -0.38
DDX41-215ENST00000512431 SLC6A3Q01959 620 aa12.7□□□□□ -0.38
DDX41-215ENST00000512431 STIM1Q13586 685 aa12.7□□□□□ -0.38
DDX41-215ENST00000512431 SEPT6Q14141 434 aa12.7□□□□□ -0.38
DDX41-215ENST00000512431 C16orf72Q14CZ0 275 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms