RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 HK3P52790 923 aa19.28■□□□□ 0.68
HMGCS1-206ENST00000511774 MAPK10P53779 464 aa19.28■□□□□ 0.68
HMGCS1-206ENST00000511774 YPEL5P62699 121 aa19.28■□□□□ 0.68
HMGCS1-206ENST00000511774 ZNF805Q5CZA5 627 aa19.28■□□□□ 0.68
HMGCS1-206ENST00000511774 ZSCAN30Q86W11 494 aa19.28■□□□□ 0.68
HMGCS1-206ENST00000511774 CCNJLQ8IV13 435 aa19.28■□□□□ 0.68
HMGCS1-206ENST00000511774 HID1Q8IV36 788 aa19.28■□□□□ 0.68
HMGCS1-206ENST00000511774 SLITRK4Q8IW52 837 aa19.28■□□□□ 0.68
HMGCS1-206ENST00000511774 PMEPA1Q969W9 287 aa19.28■□□□□ 0.68
HMGCS1-206ENST00000511774 RAB7BQ96AH8 199 aa19.28■□□□□ 0.68
HMGCS1-206ENST00000511774 PSMG3-AS1Q96PY0 264 aa19.28■□□□□ 0.68
HMGCS1-206ENST00000511774 EPAS1Q99814 870 aa19.28■□□□□ 0.68
HMGCS1-206ENST00000511774 EDEM3Q9BZQ6 932 aa19.28■□□□□ 0.68
HMGCS1-206ENST00000511774 ATP13A1Q9HD20 1204 aa19.28■□□□□ 0.68
HMGCS1-206ENST00000511774 UBE2TQ9NPD8 197 aaPredicted RBP19.28■□□□□ 0.68
HMGCS1-206ENST00000511774 SEPT10Q9P0V9 454 aa19.28■□□□□ 0.68
HMGCS1-206ENST00000511774 A0A1W2PQ27 194 aa19.27■□□□□ 0.68
HMGCS1-206ENST00000511774 A0A1W2PQ64 194 aa19.27■□□□□ 0.68
HMGCS1-206ENST00000511774 UGT2B4P06133 528 aa19.27■□□□□ 0.68
HMGCS1-206ENST00000511774 NOS2P35228 1153 aa19.27■□□□□ 0.68
HMGCS1-206ENST00000511774 ACVRL1P37023 503 aa19.27■□□□□ 0.68
HMGCS1-206ENST00000511774 APBA1Q02410 837 aa19.27■□□□□ 0.68
HMGCS1-206ENST00000511774 C16orf72Q14CZ0 275 aa19.27■□□□□ 0.68
HMGCS1-206ENST00000511774 IRF4Q15306 451 aa19.27■□□□□ 0.68
HMGCS1-206ENST00000511774 CCDC40Q4G0X9 1142 aa19.27■□□□□ 0.68
HMGCS1-206ENST00000511774 PTPN20Q4JDL3 420 aa19.27■□□□□ 0.68
HMGCS1-206ENST00000511774 C11orf57Q6ZUT1 292 aaPredicted RBP19.27■□□□□ 0.68
HMGCS1-206ENST00000511774 SLC26A9Q7LBE3 791 aa19.27■□□□□ 0.68
HMGCS1-206ENST00000511774 FSTL5Q8N475 847 aaPredicted RBP19.27■□□□□ 0.68
HMGCS1-206ENST00000511774 C1orf131Q8NDD1 294 aaKnown RBP19.27■□□□□ 0.68
HMGCS1-206ENST00000511774 GPR156Q8NFN8 814 aa19.27■□□□□ 0.68
HMGCS1-206ENST00000511774 WDCPQ9H6R7 721 aa19.27■□□□□ 0.68
HMGCS1-206ENST00000511774 SEPT3Q9UH03 358 aa19.27■□□□□ 0.68
HMGCS1-206ENST00000511774 DOLKQ9UPQ8 538 aa19.27■□□□□ 0.68
HMGCS1-206ENST00000511774 COQ6Q9Y2Z9 468 aa19.27■□□□□ 0.68
HMGCS1-206ENST00000511774 RNF215Q9Y6U7 377 aa19.27■□□□□ 0.68
HMGCS1-206ENST00000511774 A0A1W2PQC6 194 aa19.26■□□□□ 0.67
HMGCS1-206ENST00000511774 SLC6A3Q01959 620 aa19.26■□□□□ 0.67
HMGCS1-206ENST00000511774 GNA12Q03113 381 aa19.26■□□□□ 0.67
HMGCS1-206ENST00000511774 SLC20A2Q08357 652 aa19.26■□□□□ 0.67
HMGCS1-206ENST00000511774 MTA1Q13330 715 aa19.26■□□□□ 0.67
HMGCS1-206ENST00000511774 ELOCQ15369 112 aa19.26■□□□□ 0.67
HMGCS1-206ENST00000511774 KLHL40Q2TBA0 621 aa19.26■□□□□ 0.67
HMGCS1-206ENST00000511774 BRMS1LQ5PSV4 323 aa19.26■□□□□ 0.67
HMGCS1-206ENST00000511774 RETSATQ6NUM9 610 aa19.26■□□□□ 0.67
HMGCS1-206ENST00000511774 LVRNQ6Q4G3 990 aa19.26■□□□□ 0.67
HMGCS1-206ENST00000511774 LEKR1Q6ZMV7 388 aa19.26■□□□□ 0.67
HMGCS1-206ENST00000511774 RD3Q7Z3Z2 195 aa19.26■□□□□ 0.67
HMGCS1-206ENST00000511774 ZSCAN1Q8NBB4 408 aa19.26■□□□□ 0.67
HMGCS1-206ENST00000511774 SNX21Q969T3 373 aa19.26■□□□□ 0.67
HMGCS1-206ENST00000511774 NT5C3BQ969T7 300 aa19.26■□□□□ 0.67
HMGCS1-206ENST00000511774 FUBP1Q96AE4 644 aaKnown RBP19.26■□□□□ 0.67
HMGCS1-206ENST00000511774 CEP63Q96MT8 703 aa19.26■□□□□ 0.67
HMGCS1-206ENST00000511774 KLHL32Q96NJ5 620 aa19.26■□□□□ 0.67
HMGCS1-206ENST00000511774 SRRTQ9BXP5 876 aaKnown RBP19.26■□□□□ 0.67
HMGCS1-206ENST00000511774 SEMA6CQ9H3T2 930 aa19.26■□□□□ 0.67
HMGCS1-206ENST00000511774 NDFIP2Q9NV92 336 aa19.26■□□□□ 0.67
HMGCS1-206ENST00000511774 SRGAP2O75044 1071 aa19.25■□□□□ 0.67
HMGCS1-206ENST00000511774 CCL4P13236 92 aa19.25■□□□□ 0.67
HMGCS1-206ENST00000511774 POLE2P56282 527 aa19.25■□□□□ 0.67
HMGCS1-206ENST00000511774 ATXN7L2Q5T6C5 722 aaPredicted RBP19.25■□□□□ 0.67
HMGCS1-206ENST00000511774 SPRED1Q7Z699 444 aa19.25■□□□□ 0.67
HMGCS1-206ENST00000511774 DRC7Q8IY82 874 aa19.25■□□□□ 0.67
HMGCS1-206ENST00000511774 ZNF397Q8NF99 534 aaPredicted RBP19.25■□□□□ 0.67
HMGCS1-206ENST00000511774 SPATA20Q8TB22 786 aa19.25■□□□□ 0.67
HMGCS1-206ENST00000511774 C1orf74Q96LT6 269 aa19.25■□□□□ 0.67
HMGCS1-206ENST00000511774 TBCBQ99426 244 aa19.25■□□□□ 0.67
HMGCS1-206ENST00000511774 WRAP53Q9BUR4 548 aaKnown RBP19.25■□□□□ 0.67
HMGCS1-206ENST00000511774 ADNPQ9H2P0 1102 aa19.25■□□□□ 0.67
HMGCS1-206ENST00000511774 RP1L1Q8IWN7 2480 aaPredicted RBP19.24■□□□□ 0.67
HMGCS1-206ENST00000511774 FAM170AA1A519 330 aa19.24■□□□□ 0.67
HMGCS1-206ENST00000511774 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.24■□□□□ 0.67
HMGCS1-206ENST00000511774 KRIT1O00522 736 aa19.24■□□□□ 0.67
HMGCS1-206ENST00000511774 TM7SF2O76062 418 aa19.24■□□□□ 0.67
HMGCS1-206ENST00000511774 ALPIP09923 528 aa19.24■□□□□ 0.67
HMGCS1-206ENST00000511774 SULT1E1P49888 294 aa19.24■□□□□ 0.67
HMGCS1-206ENST00000511774 RNASE9P60153 205 aaKnown RBP19.24■□□□□ 0.67
HMGCS1-206ENST00000511774 KRT85P78386 507 aa19.24■□□□□ 0.67
HMGCS1-206ENST00000511774 KCNAB2Q13303 367 aa19.24■□□□□ 0.67
HMGCS1-206ENST00000511774 WSCD2Q2TBF2 565 aa19.24■□□□□ 0.67
HMGCS1-206ENST00000511774 ISM2Q6H9L7 571 aa19.24■□□□□ 0.67
HMGCS1-206ENST00000511774 TRNP1Q6NT89 227 aa19.24■□□□□ 0.67
HMGCS1-206ENST00000511774 TTI2Q6NXR4 508 aa19.24■□□□□ 0.67
HMGCS1-206ENST00000511774 ZNF783Q6ZMS7 281 aa19.24■□□□□ 0.67
HMGCS1-206ENST00000511774 TRIM59Q8IWR1 403 aa19.24■□□□□ 0.67
HMGCS1-206ENST00000511774 PLPP6Q8IY26 295 aa19.24■□□□□ 0.67
HMGCS1-206ENST00000511774 RYBPQ8N488 228 aaPredicted RBP19.24■□□□□ 0.67
HMGCS1-206ENST00000511774 NETO2Q8NC67 525 aa19.24■□□□□ 0.67
HMGCS1-206ENST00000511774 ISG20Q96AZ6 181 aaKnown RBP19.24■□□□□ 0.67
HMGCS1-206ENST00000511774 PDXPQ96GD0 296 aa19.24■□□□□ 0.67
HMGCS1-206ENST00000511774 SCAND2PQ9GZW5 306 aaPredicted RBP19.24■□□□□ 0.67
HMGCS1-206ENST00000511774 RMND1Q9NWS8 449 aa19.24■□□□□ 0.67
HMGCS1-206ENST00000511774 APPL1Q9UKG1 709 aa19.24■□□□□ 0.67
HMGCS1-206ENST00000511774 CTSEP14091 401 aa19.23■□□□□ 0.67
HMGCS1-206ENST00000511774 CASRP41180 1078 aa19.23■□□□□ 0.67
HMGCS1-206ENST00000511774 CETN1Q12798 172 aa19.23■□□□□ 0.67
HMGCS1-206ENST00000511774 RAB6CQ53S08 254 aa19.23■□□□□ 0.67
HMGCS1-206ENST00000511774 CERCAMQ5T4B2 595 aa19.23■□□□□ 0.67
HMGCS1-206ENST00000511774 BORAQ6PGQ7 559 aa19.23■□□□□ 0.67
HMGCS1-206ENST00000511774 ENPP7Q6UWV6 458 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms