RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 GK5Q6ZS86 529 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 ZBTB49Q6ZSB9 765 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 TRIM67Q6ZTA4 783 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 GPR141Q7Z602 305 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 PRRT2Q7Z6L0 340 aaPredicted RBP9.18□□□□□ -0.94
SNF8-210ENST00000511214 ZNF554Q86TJ5 538 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 DHFR2Q86XF0 187 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 ZNF354CQ86Y25 554 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 CAMK1DQ8IU85 385 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 SLC41A1Q8IVJ1 513 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 SCML4Q8N228 414 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 FIBCD1Q8N539 461 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 LZTR1Q8N653 840 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 B3GALNT2Q8NCR0 500 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 ZSCAN18Q8TBC5 510 aaPredicted RBP9.18□□□□□ -0.94
SNF8-210ENST00000511214 AGR3Q8TD06 166 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 CALML6Q8TD86 181 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 TSPEARQ8WU66 669 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 LRTOMTQ8WZ04 291 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 TFAP2CQ92754 450 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 NRCAMQ92823 1304 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 COPS5Q92905 334 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 C18orf25Q96B23 403 aaPredicted RBP9.18□□□□□ -0.94
SNF8-210ENST00000511214 SLCO4A1Q96BD0 722 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 RANBP9Q96S59 729 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 APBA2Q99767 749 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 TBL1YQ9BQ87 522 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 TMEM79Q9BSE2 394 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 C9orf16Q9BUW7 83 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 TRIM62Q9BVG3 475 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 CEP41Q9BYV8 373 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 OSBPL6Q9BZF3 934 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 OSBPL2Q9H1P3 480 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 WDR6Q9NNW5 1121 aaKnown RBP9.18□□□□□ -0.94
SNF8-210ENST00000511214 CNGB3Q9NQW8 809 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 ENTPD7Q9NQZ7 604 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 PIGVQ9NUD9 493 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 CCM2LQ9NUG4 571 aaPredicted RBP9.18□□□□□ -0.94
SNF8-210ENST00000511214 DDX18Q9NVP1 670 aaKnown RBP9.18□□□□□ -0.94
SNF8-210ENST00000511214 FAIMQ9NVQ4 179 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 SNTG2Q9NY99 539 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 PACSIN3Q9UKS6 424 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 ZNF236Q9UL36 1845 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 CNOT6Q9ULM6 557 aaKnown RBP9.18□□□□□ -0.94
SNF8-210ENST00000511214 PCDHGB4Q9UN71 923 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 NDUFAF1Q9Y375 327 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 TCAF1Q9Y4C2 921 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 PCDHGB5Q9Y5G0 923 aa9.18□□□□□ -0.94
SNF8-210ENST00000511214 PAPPA2Q9BXP8 1791 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 TRIM64BA6NI03 449 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 KCNU1A8MYU2 1149 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 STX16-NPEPL1H3BU86 382 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 NFKBIEO00221 500 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 FBP2O00757 339 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 TNPO2O14787 897 aaKnown RBP9.17□□□□□ -0.94
SNF8-210ENST00000511214 ZSCAN9O15535 394 aaPredicted RBP9.17□□□□□ -0.94
SNF8-210ENST00000511214 HUS1O60921 280 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 CBFA2T3O75081 653 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 USP12O75317 370 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 GPC4O75487 556 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 IPO13O94829 963 aaKnown RBP9.17□□□□□ -0.94
SNF8-210ENST00000511214 PDGFRBP09619 1106 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 HOXD8P13378 290 aaPredicted RBP9.17□□□□□ -0.94
SNF8-210ENST00000511214 HSD17B1P14061 328 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 HOXB8P17481 243 aaPredicted RBP9.17□□□□□ -0.94
SNF8-210ENST00000511214 PTPN1P18031 435 aaKnown RBP9.17□□□□□ -0.94
SNF8-210ENST00000511214 LMO2P25791 158 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 GABRB3P28472 473 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 PCSK6P29122 969 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 TKTP29401 623 aaKnown RBP9.17□□□□□ -0.94
SNF8-210ENST00000511214 HOXA11P31270 313 aaPredicted RBP9.17□□□□□ -0.94
SNF8-210ENST00000511214 MAGEA8P43361 318 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 ARCN1P48444 511 aaKnown RBP9.17□□□□□ -0.94
SNF8-210ENST00000511214 MRPL19P49406 292 aaKnown RBP9.17□□□□□ -0.94
SNF8-210ENST00000511214 SLC12A2P55011 1212 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 DAOAP59103 153 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 STX1BP61266 288 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 ATP6V0D1P61421 351 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 NAA20P61599 178 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 MPP1Q00013 466 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 VGLL4Q14135 290 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 CYTH1Q15438 398 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 MAP7D1Q3KQU3 841 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 AGKQ53H12 422 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 TECRLQ5HYJ1 363 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 C6orf10Q5SRN2 563 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 OLFML2BQ68BL8 750 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 ZNF772Q68DY9 489 aaPredicted RBP9.17□□□□□ -0.94
SNF8-210ENST00000511214 LCN8Q6JVE9 175 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 CNSTQ6PJW8 725 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 BEND5Q7L4P6 421 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 LRRC49Q8IUZ0 686 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 CCNYL1Q8N7R7 359 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 TXNDC5Q8NBS9 432 aaKnown RBP9.17□□□□□ -0.94
SNF8-210ENST00000511214 ACVR1CQ8NER5 493 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 PNPT1Q8TCS8 783 aaKnown RBP9.17□□□□□ -0.94
SNF8-210ENST00000511214 GTF3C2Q8WUA4 911 aaPredicted RBP9.17□□□□□ -0.94
SNF8-210ENST00000511214 NXNL1Q96CM4 212 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 SGF29Q96ES7 293 aa9.17□□□□□ -0.94
SNF8-210ENST00000511214 VPS50Q96JG6 964 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms