RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 KLF15Q9UIH9 416 aa15.58■□□□□ 0.08
TPM3-219ENST00000509409 CSNK1G3Q9Y6M4 447 aa15.58■□□□□ 0.08
TPM3-219ENST00000509409 NBEAQ8NFP9 2946 aa15.57■□□□□ 0.08
TPM3-219ENST00000509409 CELSR3Q9NYQ7 3312 aa15.57■□□□□ 0.08
TPM3-219ENST00000509409 TP53BP1Q12888 1972 aaPredicted RBP15.57■□□□□ 0.08
TPM3-219ENST00000509409 TCRBV5S1A1TA0A578 114 aa15.57■□□□□ 0.08
TPM3-219ENST00000509409 WASH4PA8MWX3 477 aa15.57■□□□□ 0.08
TPM3-219ENST00000509409 AREL1O15033 823 aa15.57■□□□□ 0.08
TPM3-219ENST00000509409 INSIG1O15503 277 aa15.57■□□□□ 0.08
TPM3-219ENST00000509409 FGF10O15520 208 aaPredicted RBP15.57■□□□□ 0.08
TPM3-219ENST00000509409 SPINT1O43278 529 aa15.57■□□□□ 0.08
TPM3-219ENST00000509409 DAPK3O43293 454 aa15.57■□□□□ 0.08
TPM3-219ENST00000509409 PSMA2P25787 234 aa15.57■□□□□ 0.08
TPM3-219ENST00000509409 PFN3P60673 137 aa15.57■□□□□ 0.08
TPM3-219ENST00000509409 EIF2B5Q13144 721 aaKnown RBP15.57■□□□□ 0.08
TPM3-219ENST00000509409 C1orf61Q13536 156 aa15.57■□□□□ 0.08
TPM3-219ENST00000509409 NCAPHQ15003 741 aa15.57■□□□□ 0.08
TPM3-219ENST00000509409 CYTH1Q15438 398 aa15.57■□□□□ 0.08
TPM3-219ENST00000509409 CDKN3Q16667 212 aa15.57■□□□□ 0.08
TPM3-219ENST00000509409 KLHL40Q2TBA0 621 aa15.57■□□□□ 0.08
TPM3-219ENST00000509409 TPRG1LQ5T0D9 272 aa15.57■□□□□ 0.08
TPM3-219ENST00000509409 CFAP58Q5T655 872 aa15.57■□□□□ 0.08
TPM3-219ENST00000509409 FAXCQ5TGI0 409 aa15.57■□□□□ 0.08
TPM3-219ENST00000509409 ZCCHC8Q6NZY4 707 aaKnown RBP15.57■□□□□ 0.08
TPM3-219ENST00000509409 GLMNQ92990 594 aa15.57■□□□□ 0.08
TPM3-219ENST00000509409 CENPTQ96BT3 561 aa15.57■□□□□ 0.08
TPM3-219ENST00000509409 EXOC2Q96KP1 924 aa15.57■□□□□ 0.08
TPM3-219ENST00000509409 SLC13A1Q9BZW2 595 aa15.57■□□□□ 0.08
TPM3-219ENST00000509409 NAT10Q9H0A0 1025 aaKnown RBP15.57■□□□□ 0.08
TPM3-219ENST00000509409 GPATCH2LQ9NWQ4 482 aa15.57■□□□□ 0.08
TPM3-219ENST00000509409 MFHAS1Q9Y4C4 1052 aa15.57■□□□□ 0.08
TPM3-219ENST00000509409 PCDHB1Q9Y5F3 818 aa15.57■□□□□ 0.08
TPM3-219ENST00000509409 ARID1BQ8NFD5 2236 aaPredicted RBP15.57■□□□□ 0.08
TPM3-219ENST00000509409 DOCK4Q8N1I0 1966 aa15.56■□□□□ 0.08
TPM3-219ENST00000509409 TRPM6Q9BX84 2022 aa15.56■□□□□ 0.08
TPM3-219ENST00000509409 TEX33O43247 280 aa15.56■□□□□ 0.08
TPM3-219ENST00000509409 PIGNO95427 931 aa15.56■□□□□ 0.08
TPM3-219ENST00000509409 GP1BAP07359 652 aa15.56■□□□□ 0.08
TPM3-219ENST00000509409 ATP1A3P13637 1013 aa15.56■□□□□ 0.08
TPM3-219ENST00000509409 ADKP55263 362 aaKnown RBP15.56■□□□□ 0.08
TPM3-219ENST00000509409 YPEL5P62699 121 aa15.56■□□□□ 0.08
TPM3-219ENST00000509409 TYRO3Q06418 890 aa15.56■□□□□ 0.08
TPM3-219ENST00000509409 CCDC173Q0VFZ6 552 aa15.56■□□□□ 0.08
TPM3-219ENST00000509409 NR0B2Q15466 257 aa15.56■□□□□ 0.08
TPM3-219ENST00000509409 PRRT3Q5FWE3 981 aa15.56■□□□□ 0.08
TPM3-219ENST00000509409 PPP1R15BQ5SWA1 713 aa15.56■□□□□ 0.08
TPM3-219ENST00000509409 PPP1R2P3Q6NXS1 205 aa15.56■□□□□ 0.08
TPM3-219ENST00000509409 EFL1Q7Z2Z2 1120 aaKnown RBP15.56■□□□□ 0.08
TPM3-219ENST00000509409 IRF2BP2Q7Z5L9 587 aa15.56■□□□□ 0.08
TPM3-219ENST00000509409 DNAAF5Q86Y56 855 aa15.56■□□□□ 0.08
TPM3-219ENST00000509409 UMODL1-AS1Q8N2C9 162 aa15.56■□□□□ 0.08
TPM3-219ENST00000509409 PAF1Q8N7H5 531 aa15.56■□□□□ 0.08
TPM3-219ENST00000509409 CELF6Q96J87 481 aaKnown RBP15.56■□□□□ 0.08
TPM3-219ENST00000509409 VCPIP1Q96JH7 1222 aa15.56■□□□□ 0.08
TPM3-219ENST00000509409 CPEB1Q9BZB8 566 aaKnown RBP15.56■□□□□ 0.08
TPM3-219ENST00000509409 SUV39H2Q9H5I1 410 aa15.56■□□□□ 0.08
TPM3-219ENST00000509409 DHX35Q9H5Z1 703 aaKnown RBP15.56■□□□□ 0.08
TPM3-219ENST00000509409 MBNL1Q9NR56 388 aaKnown RBP15.56■□□□□ 0.08
TPM3-219ENST00000509409 PARVAQ9NVD7 372 aa15.56■□□□□ 0.08
TPM3-219ENST00000509409 TAS2R14Q9NYV8 317 aa15.56■□□□□ 0.08
TPM3-219ENST00000509409 NCKIPSDQ9NZQ3 722 aa15.56■□□□□ 0.08
TPM3-219ENST00000509409 DKK3Q9UBP4 350 aa15.56■□□□□ 0.08
TPM3-219ENST00000509409 APOBEC3BQ9UH17 382 aaKnown RBP15.56■□□□□ 0.08
TPM3-219ENST00000509409 PCSK1NQ9UHG2 260 aa15.56■□□□□ 0.08
TPM3-219ENST00000509409 SALL4Q9UJQ4 1053 aa15.56■□□□□ 0.08
TPM3-219ENST00000509409 DOLKQ9UPQ8 538 aa15.56■□□□□ 0.08
TPM3-219ENST00000509409 LY6G6EA0A0G2JKS1 128 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 ARHGAP42A6NI28 874 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 SMTNL1A8MU46 457 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 J3KR12 359 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 EEF2KO00418 725 aaKnown RBP15.55■□□□□ 0.08
TPM3-219ENST00000509409 USP12O75317 370 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 CSO75390 466 aaKnown RBP15.55■□□□□ 0.08
TPM3-219ENST00000509409 MBD3O95983 291 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 ANXA6P08133 673 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 HTR7P34969 479 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 IGFALSP35858 605 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 EIF4A3P38919 411 aaKnown RBP15.55■□□□□ 0.08
TPM3-219ENST00000509409 RPIAP49247 311 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 OGDHQ02218 1023 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 ELP6Q0PNE2 266 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 MAMLD1Q13495 774 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 GRM3Q14832 879 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 ASIC2Q16515 512 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 TMEM52BQ4KMG9 183 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 FILIP1LQ4L180 1135 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 ERMARDQ5T6L9 678 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 CDCP2Q5VXM1 449 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 ERAP2Q6P179 960 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 APTXQ7Z2E3 356 aaKnown RBP15.55■□□□□ 0.08
TPM3-219ENST00000509409 PHACTR4Q8IZ21 702 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 RBFAQ8N0V3 343 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 HSD3B7Q9H2F3 369 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 TCEAL2Q9H3H9 227 aaPredicted RBP15.55■□□□□ 0.08
TPM3-219ENST00000509409 LHX3Q9UBR4 397 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 AP4E1Q9UPM8 1137 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 COQ6Q9Y2Z9 468 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 U3KQA8 63 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 ATRXP46100 2492 aa15.55■□□□□ 0.08
TPM3-219ENST00000509409 TOR1BO14657 336 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms