RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 KRT72Q14CN4 511 aa4.46□□□□□ -1.7
NFKB1-208ENST00000509165 ARL13AQ5H913 290 aaPredicted RBP4.46□□□□□ -1.7
NFKB1-208ENST00000509165 C1orf141Q5JVX7 400 aa4.46□□□□□ -1.7
NFKB1-208ENST00000509165 DGAT2L7PQ6IED9 249 aa4.46□□□□□ -1.7
NFKB1-208ENST00000509165 TMEM200AQ86VY9 491 aa4.46□□□□□ -1.7
NFKB1-208ENST00000509165 MYLK4Q86YV6 388 aaPredicted RBP4.46□□□□□ -1.7
NFKB1-208ENST00000509165 NGEFQ8N5V2 710 aa4.46□□□□□ -1.7
NFKB1-208ENST00000509165 ENDOVQ8N8Q3 282 aaKnown RBP4.46□□□□□ -1.7
NFKB1-208ENST00000509165 CD99L2Q8TCZ2 262 aa4.46□□□□□ -1.7
NFKB1-208ENST00000509165 CENPIQ92674 756 aaPredicted RBP4.46□□□□□ -1.7
NFKB1-208ENST00000509165 INPP5DQ92835 1189 aa4.46□□□□□ -1.7
NFKB1-208ENST00000509165 HDHD5Q9BXW7 423 aa4.46□□□□□ -1.7
NFKB1-208ENST00000509165 MAGEH1Q9H213 219 aa4.46□□□□□ -1.7
NFKB1-208ENST00000509165 ELAC1Q9H777 363 aaKnown RBP4.46□□□□□ -1.7
NFKB1-208ENST00000509165 PDE11AQ9HCR9 933 aa4.46□□□□□ -1.7
NFKB1-208ENST00000509165 SEPSECSQ9HD40 501 aaKnown RBP4.46□□□□□ -1.7
NFKB1-208ENST00000509165 GRHPRQ9UBQ7 328 aa4.46□□□□□ -1.7
NFKB1-208ENST00000509165 NUP98P52948 1817 aa4.46□□□□□ -1.7
NFKB1-208ENST00000509165 ASTN2O75129 1339 aaPredicted RBP4.46□□□□□ -1.7
NFKB1-208ENST00000509165 GRM8O00222 908 aa4.45□□□□□ -1.7
NFKB1-208ENST00000509165 CHL1O00533 1208 aa4.45□□□□□ -1.7
NFKB1-208ENST00000509165 MDM4O15151 490 aa4.45□□□□□ -1.7
NFKB1-208ENST00000509165 MSI1O43347 362 aaKnown RBP4.45□□□□□ -1.7
NFKB1-208ENST00000509165 LCKP06239 509 aa4.45□□□□□ -1.7
NFKB1-208ENST00000509165 SERPINA4P29622 427 aa4.45□□□□□ -1.7
NFKB1-208ENST00000509165 THBS3P49746 956 aa4.45□□□□□ -1.7
NFKB1-208ENST00000509165 RHBDL3P58872 404 aa4.45□□□□□ -1.7
NFKB1-208ENST00000509165 GAD2Q05329 585 aa4.45□□□□□ -1.7
NFKB1-208ENST00000509165 CDK18Q07002 472 aa4.45□□□□□ -1.7
NFKB1-208ENST00000509165 PMPCAQ10713 525 aa4.45□□□□□ -1.7
NFKB1-208ENST00000509165 CHAF1AQ13111 956 aaPredicted RBP4.45□□□□□ -1.7
NFKB1-208ENST00000509165 GALNT3Q14435 633 aa4.45□□□□□ -1.7
NFKB1-208ENST00000509165 VWA5B1Q5TIE3 1220 aa4.45□□□□□ -1.7
NFKB1-208ENST00000509165 DAB2IPQ5VWQ8 1189 aa4.45□□□□□ -1.7
NFKB1-208ENST00000509165 ZNF790Q6PG37 636 aa4.45□□□□□ -1.7
NFKB1-208ENST00000509165 LVRNQ6Q4G3 990 aa4.45□□□□□ -1.7
NFKB1-208ENST00000509165 TRAPPC11Q7Z392 1133 aa4.45□□□□□ -1.7
NFKB1-208ENST00000509165 TMEM199Q8N511 208 aa4.45□□□□□ -1.7
NFKB1-208ENST00000509165 VPS37AQ8NEZ2 397 aa4.45□□□□□ -1.7
NFKB1-208ENST00000509165 CPT1BQ92523 772 aa4.45□□□□□ -1.7
NFKB1-208ENST00000509165 PSMD1Q99460 953 aa4.45□□□□□ -1.7
NFKB1-208ENST00000509165 BRD8Q9H0E9 1235 aa4.45□□□□□ -1.7
NFKB1-208ENST00000509165 PNNQ9H307 717 aaKnown RBP4.45□□□□□ -1.7
NFKB1-208ENST00000509165 ZNF304Q9HCX3 659 aa4.45□□□□□ -1.7
NFKB1-208ENST00000509165 NDUFAF4Q9P032 175 aa4.45□□□□□ -1.7
NFKB1-208ENST00000509165 ANAPC4Q9UJX5 808 aa4.45□□□□□ -1.7
NFKB1-208ENST00000509165 LAMB2P55268 1798 aa4.45□□□□□ -1.7
NFKB1-208ENST00000509165 IL16Q14005 1332 aa4.45□□□□□ -1.7
NFKB1-208ENST00000509165 WDFY4Q6ZS81 3184 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 TAF1P21675 1872 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 CHD6Q8TD26 2715 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 NPIPB13A6NJU9 1138 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 NPIPB5A8MRT5 1133 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 NPIPB4C9JG80 1138 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 H0Y3Z8 333 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 IPO5O00410 1097 aaKnown RBP4.44□□□□□ -1.7
NFKB1-208ENST00000509165 SPTLC2O15270 562 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 CENPBP07199 599 aaPredicted RBP4.44□□□□□ -1.7
NFKB1-208ENST00000509165 HOXB9P17482 250 aaPredicted RBP4.44□□□□□ -1.7
NFKB1-208ENST00000509165 PCP4P48539 62 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 HTR6P50406 440 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 P2RX3P56373 397 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 SLC4A8Q2Y0W8 1093 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 CCDC38Q502W7 563 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 ENTPD8Q5MY95 495 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 HMBOX1Q6NT76 420 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 JMJD6Q6NYC1 403 aaPredicted RBP4.44□□□□□ -1.7
NFKB1-208ENST00000509165 MTFR2Q6P444 385 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 ZNF549Q6P9A3 640 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 SLC30A9Q6PML9 568 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 RINLQ6ZS11 566 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 RRAGAQ7L523 313 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 MCM10Q7L590 875 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 KLBQ86Z14 1044 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 CCDC117Q8IWD4 279 aaPredicted RBP4.44□□□□□ -1.7
NFKB1-208ENST00000509165 TMEM217Q8N7C4 229 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 CNBD1Q8NA66 436 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 KDM1BQ8NB78 822 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 ARRDC3Q96B67 414 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 C3orf49Q96BT1 292 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 MARK4Q96L34 752 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 Q9N2J8 555 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 TMEM248Q9NWD8 314 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 ARL15Q9NXU5 204 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 KCND3Q9UK17 655 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 MYO9BQ13459 2157 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 ATRXP46100 2492 aa4.44□□□□□ -1.7
NFKB1-208ENST00000509165 TCF20Q9UGU0 1960 aaKnown RBP4.44□□□□□ -1.7
NFKB1-208ENST00000509165 REV3LO60673 3130 aa4.43□□□□□ -1.7
NFKB1-208ENST00000509165 KMT2BQ9UMN6 2715 aaPredicted RBP4.43□□□□□ -1.7
NFKB1-208ENST00000509165 TRBV5-7A0A0A0MS05 114 aa4.43□□□□□ -1.7
NFKB1-208ENST00000509165 TCRBV7S3A2A0A539 114 aa4.43□□□□□ -1.7
NFKB1-208ENST00000509165 SMAD6O43541 496 aaKnown RBP4.43□□□□□ -1.7
NFKB1-208ENST00000509165 HOXB7P09629 217 aa4.43□□□□□ -1.7
NFKB1-208ENST00000509165 CST5P28325 142 aaPredicted RBP4.43□□□□□ -1.7
NFKB1-208ENST00000509165 CDC25AP30304 524 aa4.43□□□□□ -1.7
NFKB1-208ENST00000509165 ARRB2P32121 409 aa4.43□□□□□ -1.7
NFKB1-208ENST00000509165 STAT1P42224 750 aa4.43□□□□□ -1.7
NFKB1-208ENST00000509165 EIF5P55010 431 aaKnown RBP4.43□□□□□ -1.7
NFKB1-208ENST00000509165 PPATQ06203 517 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms