RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 Q3C1V9 767 aa7.37□□□□□ -1.23
UBE2D3-224ENST00000508474 DRICH1Q6PGQ1 229 aaPredicted RBP7.37□□□□□ -1.23
UBE2D3-224ENST00000508474 IL27RAQ6UWB1 636 aa7.37□□□□□ -1.23
UBE2D3-224ENST00000508474 TMPRSS11AQ6ZMR5 421 aa7.37□□□□□ -1.23
UBE2D3-224ENST00000508474 FAM92BQ6ZTR7 304 aa7.37□□□□□ -1.23
UBE2D3-224ENST00000508474 FAM131BQ86XD5 332 aa7.37□□□□□ -1.23
UBE2D3-224ENST00000508474 PM20D2Q8IYS1 436 aa7.37□□□□□ -1.23
UBE2D3-224ENST00000508474 NKAPQ8N5F7 415 aaKnown RBP7.37□□□□□ -1.23
UBE2D3-224ENST00000508474 CDYL2Q8N8U2 506 aa7.37□□□□□ -1.23
UBE2D3-224ENST00000508474 IPCEF1Q8WWN9 437 aaPredicted RBP7.37□□□□□ -1.23
UBE2D3-224ENST00000508474 LENG8Q96PV6 779 aaPredicted RBP7.37□□□□□ -1.23
UBE2D3-224ENST00000508474 VPS35Q96QK1 796 aa7.37□□□□□ -1.23
UBE2D3-224ENST00000508474 ZNF670Q9BS34 389 aa7.37□□□□□ -1.23
UBE2D3-224ENST00000508474 SLC22A4Q9H015 551 aa7.37□□□□□ -1.23
UBE2D3-224ENST00000508474 ZSCAN32Q9NX65 697 aa7.37□□□□□ -1.23
UBE2D3-224ENST00000508474 MOSPD1Q9UJG1 213 aa7.37□□□□□ -1.23
UBE2D3-224ENST00000508474 SALL4Q9UJQ4 1053 aa7.37□□□□□ -1.23
UBE2D3-224ENST00000508474 TMEM59LQ9UK28 342 aa7.37□□□□□ -1.23
UBE2D3-224ENST00000508474 SAMHD1Q9Y3Z3 626 aaKnown RBP7.37□□□□□ -1.23
UBE2D3-224ENST00000508474 ASB14A6NK59 587 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 AQP12BA6NM10 295 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 AZIN1O14977 448 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 RPLP0P05388 317 aaKnown RBP7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 HGFP14210 728 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 RCVRNP35243 200 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 IDH3AP50213 366 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 KPNA1P52294 538 aaPredicted RBP7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 ZNF143P52747 638 aaPredicted RBP7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 SLC6A3Q01959 620 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 PRKD1Q15139 912 aaPredicted RBP7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 MED22Q15528 200 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 HKDC1Q2TB90 917 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 FGD3Q5JSP0 725 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 NEPROQ6NW34 567 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 ZDHHC24Q6UX98 284 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 SPPL2CQ8IUH8 684 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 AQP12AQ8IXF9 295 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 MPP5Q8N3R9 675 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 MCOLN3Q8TDD5 553 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 UNKQ9C0B0 810 aaKnown RBP7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 GPRC5CQ9NQ84 441 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 INTS10Q9NVR2 710 aaKnown RBP7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 PCDHB12Q9Y5F1 795 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 CASZ1Q86V15 1759 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 A0A0J9YYE9 177 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 GNG14A0A1W2PPG7 69 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 CCDC189A1A4V9 331 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 FAM172BPA6NC97 362 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 C2orf71A6NGG8 1288 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 RGL2O15211 777 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 HBP1O60381 514 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 MTRF1O75570 445 aaKnown RBP7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 SLITRK3O94933 977 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 ERBB2P04626 1255 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 NTRK1P04629 796 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 C8BP07358 591 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 PSMA1P25786 263 aaKnown RBP7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 HPCAL1P37235 193 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 MTHFRP42898 656 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 BAG6P46379 1132 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 WDR4P57081 412 aaKnown RBP7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 MVKQ03426 396 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 PPP3CAQ08209 521 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 TWF1Q12792 350 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 BAATQ14032 418 aaPredicted RBP7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 ARHGEF7Q14155 803 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 IL17AQ16552 155 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 RALGPS1Q5JS13 557 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 ZCCHC8Q6NZY4 707 aaKnown RBP7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 CES3Q6UWW8 571 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 GK5Q6ZS86 529 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 KCNK18Q7Z418 384 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 DCPSQ96C86 337 aaKnown RBP7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 MAGEB10Q96LZ2 347 aaPredicted RBP7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 ERMAPQ96PL5 475 aaPredicted RBP7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 EGFL7Q9UHF1 273 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 VPS4AQ9UN37 437 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 CENPBD1B2RD01 187 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 SLC28A1O00337 649 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 MPZL2O60487 215 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 SLC22A3O75751 556 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 NOL4O94818 638 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 TPH1P17752 444 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 IGFBP5P24593 272 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 MYL9P24844 172 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 DLG1Q12959 904 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 BNIP3Q12983 259 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 CARTPTQ16568 116 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 PLEKHG6Q3KR16 790 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 RNASEH2BQ5TBB1 312 aaKnown RBP7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 REP15Q6BDI9 236 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 BHLHB9Q6PI77 547 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 CXXC5Q7LFL8 322 aaKnown RBP7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 NIPA1Q7RTP0 329 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 IZUMO1Q8IYV9 350 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 CCDC185Q8N715 623 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 PTGR2Q8N8N7 351 aaPredicted RBP7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 C12orf43Q96C57 262 aaKnown RBP7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 MASTLQ96GX5 879 aa7.36□□□□□ -1.23
UBE2D3-224ENST00000508474 DIRAS2Q96HU8 199 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms