RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 LRRC19Q9H756 370 aa21.08■□□□□ 0.97
CLDND1-216ENST00000507944 LHX3Q9UBR4 397 aa21.08■□□□□ 0.97
CLDND1-216ENST00000507944 UBA2Q9UBT2 640 aaPredicted RBP21.08■□□□□ 0.97
CLDND1-216ENST00000507944 AP4E1Q9UPM8 1137 aa21.08■□□□□ 0.97
CLDND1-216ENST00000507944 K7ESM1 405 aa21.07■□□□□ 0.96
CLDND1-216ENST00000507944 ATMINO43313 823 aaPredicted RBP21.07■□□□□ 0.96
CLDND1-216ENST00000507944 NEBLO76041 1014 aa21.07■□□□□ 0.96
CLDND1-216ENST00000507944 TM7SF2O76062 418 aa21.07■□□□□ 0.96
CLDND1-216ENST00000507944 MT-CO3P00414 261 aa21.07■□□□□ 0.96
CLDND1-216ENST00000507944 ITIH2P19823 946 aa21.07■□□□□ 0.96
CLDND1-216ENST00000507944 NDST2P52849 883 aa21.07■□□□□ 0.96
CLDND1-216ENST00000507944 RTP5Q14D33 572 aa21.07■□□□□ 0.96
CLDND1-216ENST00000507944 ERMARDQ5T6L9 678 aa21.07■□□□□ 0.96
CLDND1-216ENST00000507944 KDM7AQ6ZMT4 941 aa21.07■□□□□ 0.96
CLDND1-216ENST00000507944 PDZD3Q86UT5 571 aa21.07■□□□□ 0.96
CLDND1-216ENST00000507944 VPS36Q86VN1 386 aa21.07■□□□□ 0.96
CLDND1-216ENST00000507944 DNAAF5Q86Y56 855 aa21.07■□□□□ 0.96
CLDND1-216ENST00000507944 DCBLD1Q8N8Z6 715 aa21.07■□□□□ 0.96
CLDND1-216ENST00000507944 FAM181AQ8N9Y4 354 aa21.07■□□□□ 0.96
CLDND1-216ENST00000507944 ZNF548Q8NEK5 533 aaPredicted RBP21.07■□□□□ 0.96
CLDND1-216ENST00000507944 CXorf40AQ8TE69 158 aa21.07■□□□□ 0.96
CLDND1-216ENST00000507944 DHX35Q9H5Z1 703 aaKnown RBP21.07■□□□□ 0.96
CLDND1-216ENST00000507944 AIPL1Q9NZN9 384 aa21.07■□□□□ 0.96
CLDND1-216ENST00000507944 PCSK1NQ9UHG2 260 aa21.07■□□□□ 0.96
CLDND1-216ENST00000507944 KLF15Q9UIH9 416 aa21.07■□□□□ 0.96
CLDND1-216ENST00000507944 A0A087WV48 116 aa21.06■□□□□ 0.96
CLDND1-216ENST00000507944 A0A1W2PQC6 194 aa21.06■□□□□ 0.96
CLDND1-216ENST00000507944 TMEM191CA6NGB0 347 aa21.06■□□□□ 0.96
CLDND1-216ENST00000507944 EIF3CLB5ME19 914 aaKnown RBP21.06■□□□□ 0.96
CLDND1-216ENST00000507944 EEF2KO00418 725 aaKnown RBP21.06■□□□□ 0.96
CLDND1-216ENST00000507944 FTLP02792 175 aaPredicted RBP21.06■□□□□ 0.96
CLDND1-216ENST00000507944 GZMAP12544 262 aa21.06■□□□□ 0.96
CLDND1-216ENST00000507944 MYF5P13349 255 aa21.06■□□□□ 0.96
CLDND1-216ENST00000507944 JUNDP17535 347 aa21.06■□□□□ 0.96
CLDND1-216ENST00000507944 XPAP23025 273 aaPredicted RBP21.06■□□□□ 0.96
CLDND1-216ENST00000507944 DUSP3P51452 185 aaPredicted RBP21.06■□□□□ 0.96
CLDND1-216ENST00000507944 SEMG2Q02383 582 aa21.06■□□□□ 0.96
CLDND1-216ENST00000507944 EIF2B5Q13144 721 aaKnown RBP21.06■□□□□ 0.96
CLDND1-216ENST00000507944 CA9Q16790 459 aa21.06■□□□□ 0.96
CLDND1-216ENST00000507944 ZNF571Q7Z3V5 609 aaPredicted RBP21.06■□□□□ 0.96
CLDND1-216ENST00000507944 ARFGAP1Q8N6T3 406 aa21.06■□□□□ 0.96
CLDND1-216ENST00000507944 CELF6Q96J87 481 aaKnown RBP21.06■□□□□ 0.96
CLDND1-216ENST00000507944 EXOC2Q96KP1 924 aa21.06■□□□□ 0.96
CLDND1-216ENST00000507944 EIF3CQ99613 913 aaKnown RBP21.06■□□□□ 0.96
CLDND1-216ENST00000507944 NCAPGQ9BPX3 1015 aa21.06■□□□□ 0.96
CLDND1-216ENST00000507944 C1QTNF7Q9BXJ2 289 aa21.06■□□□□ 0.96
CLDND1-216ENST00000507944 USP29Q9HBJ7 922 aa21.06■□□□□ 0.96
CLDND1-216ENST00000507944 EVA1BQ9NVM1 165 aa21.06■□□□□ 0.96
CLDND1-216ENST00000507944 CSNK1G3Q9Y6M4 447 aa21.06■□□□□ 0.96
CLDND1-216ENST00000507944 RP1P56715 2156 aa21.06■□□□□ 0.96
CLDND1-216ENST00000507944 LY6G6EA0A0G2JKS1 128 aa21.05■□□□□ 0.96
CLDND1-216ENST00000507944 J3KR12 359 aa21.05■□□□□ 0.96
CLDND1-216ENST00000507944 PRAMEF11O60813 436 aa21.05■□□□□ 0.96
CLDND1-216ENST00000507944 RNF8O76064 485 aa21.05■□□□□ 0.96
CLDND1-216ENST00000507944 PIGNO95427 931 aa21.05■□□□□ 0.96
CLDND1-216ENST00000507944 HOXB3P14651 431 aaPredicted RBP21.05■□□□□ 0.96
CLDND1-216ENST00000507944 IGFALSP35858 605 aa21.05■□□□□ 0.96
CLDND1-216ENST00000507944 ZNF165P49910 485 aa21.05■□□□□ 0.96
CLDND1-216ENST00000507944 SUOXP51687 545 aa21.05■□□□□ 0.96
CLDND1-216ENST00000507944 THOP1P52888 689 aa21.05■□□□□ 0.96
CLDND1-216ENST00000507944 PTK2BQ14289 1009 aa21.05■□□□□ 0.96
CLDND1-216ENST00000507944 E4F1Q66K89 784 aaPredicted RBP21.05■□□□□ 0.96
CLDND1-216ENST00000507944 HCAR2Q8TDS4 363 aa21.05■□□□□ 0.96
CLDND1-216ENST00000507944 LMX1AQ8TE12 382 aa21.05■□□□□ 0.96
CLDND1-216ENST00000507944 NAP1L5Q96NT1 182 aaPredicted RBP21.05■□□□□ 0.96
CLDND1-216ENST00000507944 DCBLD2Q96PD2 775 aa21.05■□□□□ 0.96
CLDND1-216ENST00000507944 PEBP4Q96S96 227 aa21.05■□□□□ 0.96
CLDND1-216ENST00000507944 WRAP53Q9BUR4 548 aaKnown RBP21.05■□□□□ 0.96
CLDND1-216ENST00000507944 SNRNP25Q9BV90 132 aaKnown RBP21.05■□□□□ 0.96
CLDND1-216ENST00000507944 SLC39A8Q9C0K1 460 aa21.05■□□□□ 0.96
CLDND1-216ENST00000507944 SUV39H2Q9H5I1 410 aa21.05■□□□□ 0.96
CLDND1-216ENST00000507944 PDFQ9HBH1 243 aa21.05■□□□□ 0.96
CLDND1-216ENST00000507944 U3KQA8 63 aa21.05■□□□□ 0.96
CLDND1-216ENST00000507944 LRRK1Q38SD2 2015 aa21.05■□□□□ 0.96
CLDND1-216ENST00000507944 A0A1B0GTH6 734 aa21.04■□□□□ 0.96
CLDND1-216ENST00000507944 ARHGAP42A6NI28 874 aa21.04■□□□□ 0.96
CLDND1-216ENST00000507944 DAPK3O43293 454 aa21.04■□□□□ 0.96
CLDND1-216ENST00000507944 AQP9O43315 295 aa21.04■□□□□ 0.96
CLDND1-216ENST00000507944 OPA1O60313 960 aa21.04■□□□□ 0.96
CLDND1-216ENST00000507944 PRKCIP41743 596 aa21.04■□□□□ 0.96
CLDND1-216ENST00000507944 PAPOLAP51003 745 aaKnown RBP21.04■□□□□ 0.96
CLDND1-216ENST00000507944 YPEL5P62699 121 aa21.04■□□□□ 0.96
CLDND1-216ENST00000507944 KLHL30Q0D2K2 578 aa21.04■□□□□ 0.96
CLDND1-216ENST00000507944 ELP6Q0PNE2 266 aa21.04■□□□□ 0.96
CLDND1-216ENST00000507944 GRM3Q14832 879 aa21.04■□□□□ 0.96
CLDND1-216ENST00000507944 KLHL40Q2TBA0 621 aa21.04■□□□□ 0.96
CLDND1-216ENST00000507944 TMEM52BQ4KMG9 183 aa21.04■□□□□ 0.96
CLDND1-216ENST00000507944 CAVIN1Q6NZI2 390 aaKnown RBP21.04■□□□□ 0.96
CLDND1-216ENST00000507944 ZCCHC8Q6NZY4 707 aaKnown RBP21.04■□□□□ 0.96
CLDND1-216ENST00000507944 FNIP1Q8TF40 1166 aa21.04■□□□□ 0.96
CLDND1-216ENST00000507944 BTN2A2Q8WVV5 523 aa21.04■□□□□ 0.96
CLDND1-216ENST00000507944 KCTD15Q96SI1 283 aaPredicted RBP21.04■□□□□ 0.96
CLDND1-216ENST00000507944 TRIM7Q9C029 511 aa21.04■□□□□ 0.96
CLDND1-216ENST00000507944 MBNL1Q9NR56 388 aaKnown RBP21.04■□□□□ 0.96
CLDND1-216ENST00000507944 CNOT8Q9UFF9 292 aaKnown RBP21.04■□□□□ 0.96
CLDND1-216ENST00000507944 DDX3XO00571 662 aaKnown RBP eCLIP21.03■□□□□ 0.96
CLDND1-216ENST00000507944 PRPSAP2O60256 369 aa21.03■□□□□ 0.96
CLDND1-216ENST00000507944 GP1BAP07359 652 aa21.03■□□□□ 0.96
CLDND1-216ENST00000507944 ERCC2P18074 760 aa21.03■□□□□ 0.96
CLDND1-216ENST00000507944 MIPP30301 263 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms