RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 CNR2P34972 360 aa20.29■□□□□ 0.84
USP53-203ENST00000507597 MPP3Q13368 585 aa20.29■□□□□ 0.84
USP53-203ENST00000507597 ARMC12Q5T9G4 340 aa20.29■□□□□ 0.84
USP53-203ENST00000507597 FBXL19Q6PCT2 694 aa20.29■□□□□ 0.84
USP53-203ENST00000507597 SYDE1Q6ZW31 735 aaPredicted RBP20.29■□□□□ 0.84
USP53-203ENST00000507597 WDR5BQ86VZ2 330 aa20.29■□□□□ 0.84
USP53-203ENST00000507597 HDDC3Q8N4P3 179 aa20.29■□□□□ 0.84
USP53-203ENST00000507597 MDGA1Q8NFP4 955 aa20.29■□□□□ 0.84
USP53-203ENST00000507597 OR6K2Q8NGY2 324 aa20.29■□□□□ 0.84
USP53-203ENST00000507597 IFT43Q96FT9 208 aa20.29■□□□□ 0.84
USP53-203ENST00000507597 IMP4Q96G21 291 aaKnown RBP20.29■□□□□ 0.84
USP53-203ENST00000507597 KLHL32Q96NJ5 620 aa20.29■□□□□ 0.84
USP53-203ENST00000507597 ADGRE3Q9BY15 652 aa20.29■□□□□ 0.84
USP53-203ENST00000507597 HDAC8Q9BY41 377 aa20.29■□□□□ 0.84
USP53-203ENST00000507597 CEP41Q9BYV8 373 aa20.29■□□□□ 0.84
USP53-203ENST00000507597 FBXL12Q9NXK8 326 aa20.29■□□□□ 0.84
USP53-203ENST00000507597 FZD4Q9ULV1 537 aa20.29■□□□□ 0.84
USP53-203ENST00000507597 MUSKO15146 869 aa20.28■□□□□ 0.84
USP53-203ENST00000507597 FANCGO15287 622 aa20.28■□□□□ 0.84
USP53-203ENST00000507597 MID1O15344 667 aa20.28■□□□□ 0.84
USP53-203ENST00000507597 CD86P42081 329 aa20.28■□□□□ 0.84
USP53-203ENST00000507597 RGRP47804 291 aa20.28■□□□□ 0.84
USP53-203ENST00000507597 NEK3P51956 506 aa20.28■□□□□ 0.84
USP53-203ENST00000507597 EPHB1P54762 984 aa20.28■□□□□ 0.84
USP53-203ENST00000507597 RPL26P61254 145 aaKnown RBP20.28■□□□□ 0.84
USP53-203ENST00000507597 DSC2Q02487 901 aa20.28■□□□□ 0.84
USP53-203ENST00000507597 ANGPT1Q15389 498 aa20.28■□□□□ 0.84
USP53-203ENST00000507597 SLC36A4Q6YBV0 504 aa20.28■□□□□ 0.84
USP53-203ENST00000507597 ERN2Q76MJ5 926 aaKnown RBP20.28■□□□□ 0.84
USP53-203ENST00000507597 MAATS1Q7Z4T9 603 aa20.28■□□□□ 0.84
USP53-203ENST00000507597 CCDC110Q8TBZ0 833 aa20.28■□□□□ 0.84
USP53-203ENST00000507597 ERLEC1Q96DZ1 483 aa20.28■□□□□ 0.84
USP53-203ENST00000507597 KCNH6Q9H252 994 aa20.28■□□□□ 0.84
USP53-203ENST00000507597 KDM4CQ9H3R0 1056 aa20.28■□□□□ 0.84
USP53-203ENST00000507597 C10orf88Q9H8K7 445 aa20.28■□□□□ 0.84
USP53-203ENST00000507597 SGK2Q9HBY8 427 aa20.28■□□□□ 0.84
USP53-203ENST00000507597 TPX2Q9ULW0 747 aaKnown RBP20.28■□□□□ 0.84
USP53-203ENST00000507597 RPL26L1Q9UNX3 145 aaKnown RBP20.28■□□□□ 0.84
USP53-203ENST00000507597 RAI2Q9Y5P3 530 aa20.28■□□□□ 0.84
USP53-203ENST00000507597 ATG2BQ96BY7 2078 aa20.28■□□□□ 0.84
USP53-203ENST00000507597 RNASEH2AO75792 299 aaKnown RBP20.27■□□□□ 0.84
USP53-203ENST00000507597 CTSLP07711 333 aa20.27■□□□□ 0.84
USP53-203ENST00000507597 NFKB1P19838 968 aa20.27■□□□□ 0.84
USP53-203ENST00000507597 KCNJ1P48048 391 aa20.27■□□□□ 0.84
USP53-203ENST00000507597 DHX34Q14147 1143 aaKnown RBP20.27■□□□□ 0.84
USP53-203ENST00000507597 PPP1R7Q15435 360 aa20.27■□□□□ 0.84
USP53-203ENST00000507597 ERAP2Q6P179 960 aa20.27■□□□□ 0.84
USP53-203ENST00000507597 CEP112Q8N8E3 955 aa20.27■□□□□ 0.84
USP53-203ENST00000507597 SPATA4Q8NEY3 305 aa20.27■□□□□ 0.84
USP53-203ENST00000507597 ARRDC2Q8TBH0 407 aa20.27■□□□□ 0.84
USP53-203ENST00000507597 PDCD6IPQ8WUM4 868 aaKnown RBP20.27■□□□□ 0.84
USP53-203ENST00000507597 SRPK1Q96SB4 655 aaKnown RBP20.27■□□□□ 0.84
USP53-203ENST00000507597 BTBD1Q9H0C5 482 aa20.27■□□□□ 0.84
USP53-203ENST00000507597 PCDH9Q9HC56 1237 aa20.27■□□□□ 0.84
USP53-203ENST00000507597 ZSCAN32Q9NX65 697 aa20.27■□□□□ 0.84
USP53-203ENST00000507597 SMARCAL1Q9NZC9 954 aa20.27■□□□□ 0.84
USP53-203ENST00000507597 PCYOX1Q9UHG3 505 aa20.27■□□□□ 0.84
USP53-203ENST00000507597 PHTF1Q9UMS5 762 aa20.27■□□□□ 0.84
USP53-203ENST00000507597 SHROOM3Q8TF72 1996 aa20.26■□□□□ 0.83
USP53-203ENST00000507597 CKAP5Q14008 2032 aa20.26■□□□□ 0.83
USP53-203ENST00000507597 C16orf96A6NNT2 1141 aa20.26■□□□□ 0.83
USP53-203ENST00000507597 ERI2A8K979 691 aaKnown RBP20.26■□□□□ 0.83
USP53-203ENST00000507597 E7EVH7 732 aa20.26■□□□□ 0.83
USP53-203ENST00000507597 NDC80O14777 642 aa20.26■□□□□ 0.83
USP53-203ENST00000507597 HTRA2O43464 458 aaPredicted RBP20.26■□□□□ 0.83
USP53-203ENST00000507597 EPOP01588 193 aa20.26■□□□□ 0.83
USP53-203ENST00000507597 GKP32189 559 aa20.26■□□□□ 0.83
USP53-203ENST00000507597 LMAN1P49257 510 aa20.26■□□□□ 0.83
USP53-203ENST00000507597 ELP6Q0PNE2 266 aa20.26■□□□□ 0.83
USP53-203ENST00000507597 ZC3H14Q6PJT7 736 aaKnown RBP20.26■□□□□ 0.83
USP53-203ENST00000507597 TTC7BQ86TV6 843 aa20.26■□□□□ 0.83
USP53-203ENST00000507597 CAMK1DQ8IU85 385 aa20.26■□□□□ 0.83
USP53-203ENST00000507597 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.26■□□□□ 0.83
USP53-203ENST00000507597 RBM15Q96T37 977 aaKnown RBP eCLIP20.26■□□□□ 0.83
USP53-203ENST00000507597 FSD1LQ9BXM9 530 aa20.26■□□□□ 0.83
USP53-203ENST00000507597 POLR3BQ9NW08 1133 aaPredicted RBP20.26■□□□□ 0.83
USP53-203ENST00000507597 C2orf42Q9NWW7 574 aa20.26■□□□□ 0.83
USP53-203ENST00000507597 USP36Q9P275 1121 aaKnown RBP20.26■□□□□ 0.83
USP53-203ENST00000507597 SARDHQ9UL12 918 aa20.26■□□□□ 0.83
USP53-203ENST00000507597 MRFAP1Q9Y605 127 aa20.26■□□□□ 0.83
USP53-203ENST00000507597 TRIOO75962 3097 aa20.25■□□□□ 0.83
USP53-203ENST00000507597 A0A1W2PP55 124 aa20.25■□□□□ 0.83
USP53-203ENST00000507597 LRRC72A6NJI9 287 aa20.25■□□□□ 0.83
USP53-203ENST00000507597 NDUFS2O75306 463 aa20.25■□□□□ 0.83
USP53-203ENST00000507597 PIGNO95427 931 aa20.25■□□□□ 0.83
USP53-203ENST00000507597 CPP00450 1065 aa20.25■□□□□ 0.83
USP53-203ENST00000507597 IGLV3-19P01714 112 aa20.25■□□□□ 0.83
USP53-203ENST00000507597 KRT14P02533 472 aa20.25■□□□□ 0.83
USP53-203ENST00000507597 CD68P34810 354 aaPredicted RBP20.25■□□□□ 0.83
USP53-203ENST00000507597 TPMTP51580 245 aa20.25■□□□□ 0.83
USP53-203ENST00000507597 SKOR1P84550 965 aa20.25■□□□□ 0.83
USP53-203ENST00000507597 CDK18Q07002 472 aa20.25■□□□□ 0.83
USP53-203ENST00000507597 NIPAL4Q0D2K0 466 aa20.25■□□□□ 0.83
USP53-203ENST00000507597 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.25■□□□□ 0.83
USP53-203ENST00000507597 ZNF572Q7Z3I7 529 aaPredicted RBP20.25■□□□□ 0.83
USP53-203ENST00000507597 CACUL1Q86Y37 369 aa20.25■□□□□ 0.83
USP53-203ENST00000507597 KLHL7Q8IXQ5 586 aa20.25■□□□□ 0.83
USP53-203ENST00000507597 SPOCK2Q92563 424 aa20.25■□□□□ 0.83
USP53-203ENST00000507597 SLCO2A1Q92959 643 aa20.25■□□□□ 0.83
USP53-203ENST00000507597 TPSD1Q9BZJ3 242 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms