RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 TFPIP10646 304 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 ATP1A3P13637 1013 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 SLC2A4P14672 509 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 ITGAXP20702 1163 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 GPR12P47775 334 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 MXI1P50539 228 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 NUDT6P53370 316 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 NR1H2P55055 460 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 UFM1P61960 85 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 ZXDBP98169 803 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 TRPC3Q13507 836 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 PLEKHO1Q53GL0 409 aaPredicted RBP3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 LRRC8DQ7L1W4 858 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 FJX1Q86VR8 437 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 TDRPQ86YL5 185 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 TMC8Q8IU68 726 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 DENND6AQ8IWF6 608 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 SMAP1Q8IYB5 467 aaPredicted RBP3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 CLIP4Q8N3C7 705 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 PARP16Q8N5Y8 322 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 GJC3Q8NFK1 279 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 LMO3Q8TAP4 145 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 TMEM170AQ8WVE7 144 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 NUDCD2Q8WVJ2 157 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 RNF183Q96D59 192 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 APOPT1Q96IL0 206 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 NTPCRQ9BSD7 190 aaKnown RBP3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 FUZQ9BT04 418 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 INTS2Q9H0H0 1204 aaKnown RBP3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 TKTL2Q9H0I9 626 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 DDX4Q9NQI0 724 aaKnown RBP3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 PCDHB16Q9NRJ7 776 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 SPATS2LQ9NUQ6 558 aaKnown RBP3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 TMEM51Q9NW97 253 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 HIF1ANQ9NWT6 349 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 BABAM1Q9NWV8 329 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 SLC25A10Q9UBX3 287 aaPredicted RBP3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 CNOT7Q9UIV1 285 aaKnown RBP3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 SUFUQ9UMX1 484 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 NAALADL1Q9UQQ1 740 aa3.59□□□□□ -1.83
CDC42SE2-210ENST00000506929 IGHV4-28A0A0C4DH34 117 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 A0A0U1RQF3 1178 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 DYTNA2CJ06 578 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 TYW5A2RUC4 315 aaKnown RBP3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 C4orf47A7E2U8 309 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 LACTBL1A8MY62 500 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 VWA5AO00534 786 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 EBAG9O00559 213 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 PAPSS2O95340 614 aaPredicted RBP3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 AFPP02771 609 aaKnown RBP3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 MMP3P08254 477 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 HOXC6P09630 235 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 ABCD3P28288 659 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 SSTR2P30874 369 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 PSMC2P35998 433 aaKnown RBP3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 AMTP48728 403 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 TLE2Q04725 743 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 DDR1Q08345 913 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 RUNX2Q13950 521 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 KLHL22Q53GT1 634 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 PAPPA-AS1Q5QFB9 102 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 FAM69AQ5T7M9 428 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 GORABQ5T7V8 394 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 KIAA1161Q6NSJ0 714 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 TMEM81Q6P7N7 255 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 FBXO46Q6PJ61 603 aaPredicted RBP3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 H1FNTQ75WM6 255 aaPredicted RBP3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 RBM23Q86U06 439 aaKnown RBP3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 SPATA2LQ8IUW3 424 aaPredicted RBP3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 IQCF1Q8N6M8 205 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 TMEM163Q8TC26 289 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 ST8SIA4Q92187 359 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 SH3KBP1Q96B97 665 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 PABPC5Q96DU9 382 aaKnown RBP3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 RNF125Q96EQ8 232 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 THOC3Q96J01 351 aaKnown RBP3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 KLHL15Q96M94 604 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 AGXT2Q9BYV1 514 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 SLC25A18Q9H1K4 315 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 CDT1Q9H211 546 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 CYSLTR2Q9NS75 346 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 C20orf141Q9NUB4 165 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 KIAA1456Q9P272 454 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 SRPRBQ9Y5M8 271 aaKnown RBP3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 A3GALT2U3KPV4 340 aa3.58□□□□□ -1.84
CDC42SE2-210ENST00000506929 IGLV5-52A0A0A0MRZ9 124 aa3.57□□□□□ -1.84
CDC42SE2-210ENST00000506929 NPIPB11E5RHQ5 1161 aa3.57□□□□□ -1.84
CDC42SE2-210ENST00000506929 SEC31AO94979 1220 aaKnown RBP3.57□□□□□ -1.84
CDC42SE2-210ENST00000506929 PPP1R3DO95685 299 aa3.57□□□□□ -1.84
CDC42SE2-210ENST00000506929 DSCR9P59020 149 aa3.57□□□□□ -1.84
CDC42SE2-210ENST00000506929 BRWD1-AS2P59051 145 aa3.57□□□□□ -1.84
CDC42SE2-210ENST00000506929 RPP30P78346 268 aaKnown RBP3.57□□□□□ -1.84
CDC42SE2-210ENST00000506929 ADORA2A-AS1P86434 159 aa3.57□□□□□ -1.84
CDC42SE2-210ENST00000506929 ARHGEF6Q15052 776 aa3.57□□□□□ -1.84
CDC42SE2-210ENST00000506929 PRICKLE4Q2TBC4 344 aa3.57□□□□□ -1.84
CDC42SE2-210ENST00000506929 SETMARQ53H47 684 aaPredicted RBP3.57□□□□□ -1.84
CDC42SE2-210ENST00000506929 TDRD12Q587J7 1177 aaKnown RBP3.57□□□□□ -1.84
CDC42SE2-210ENST00000506929 SERTAD4-AS1Q5TG53 156 aa3.57□□□□□ -1.84
CDC42SE2-210ENST00000506929 ZNF324BQ6AW86 544 aaPredicted RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms