RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 DKK3Q9UBP4 350 aa20.11■□□□□ 0.81
SNX25-204ENST00000506896 AMACRQ9UHK6 382 aa20.11■□□□□ 0.81
SNX25-204ENST00000506896 EFR3BQ9Y2G0 817 aa20.11■□□□□ 0.81
SNX25-204ENST00000506896 CAPN6Q9Y6Q1 641 aa20.11■□□□□ 0.81
SNX25-204ENST00000506896 NCOR2Q9Y618 2525 aa20.11■□□□□ 0.81
SNX25-204ENST00000506896 hCG_1818297A0A087WSY0 165 aa20.1■□□□□ 0.81
SNX25-204ENST00000506896 TBC1D3DA0A087WVF3 549 aa20.1■□□□□ 0.81
SNX25-204ENST00000506896 TBC1D3IA0A087WXS9 549 aa20.1■□□□□ 0.81
SNX25-204ENST00000506896 TBC1D3EA0A087X179 549 aa20.1■□□□□ 0.81
SNX25-204ENST00000506896 TBC1D3KA0A087X1G2 549 aa20.1■□□□□ 0.81
SNX25-204ENST00000506896 TBC1D3FA6NER0 549 aaPredicted RBP20.1■□□□□ 0.81
SNX25-204ENST00000506896 TBC1D3LB9A6J9 549 aa20.1■□□□□ 0.81
SNX25-204ENST00000506896 PLK4O00444 970 aa20.1■□□□□ 0.81
SNX25-204ENST00000506896 CST8O60676 142 aa20.1■□□□□ 0.81
SNX25-204ENST00000506896 FSBPO95073 299 aa20.1■□□□□ 0.81
SNX25-204ENST00000506896 PTMAP06454 111 aaKnown RBP20.1■□□□□ 0.81
SNX25-204ENST00000506896 TBC1D3HP0C7X1 549 aa20.1■□□□□ 0.81
SNX25-204ENST00000506896 ADRB3P13945 408 aa20.1■□□□□ 0.81
SNX25-204ENST00000506896 ENGP17813 658 aa20.1■□□□□ 0.81
SNX25-204ENST00000506896 GKP32189 559 aa20.1■□□□□ 0.81
SNX25-204ENST00000506896 NUDT1P36639 197 aa20.1■□□□□ 0.81
SNX25-204ENST00000506896 PEX5P50542 639 aa20.1■□□□□ 0.81
SNX25-204ENST00000506896 CCR5P51681 352 aa20.1■□□□□ 0.81
SNX25-204ENST00000506896 PPIDQ08752 370 aaKnown RBP20.1■□□□□ 0.81
SNX25-204ENST00000506896 TBC1D3GQ6DHY5 549 aa20.1■□□□□ 0.81
SNX25-204ENST00000506896 TBC1D3CQ6IPX1 549 aa20.1■□□□□ 0.81
SNX25-204ENST00000506896 TBC1D3Q8IZP1 549 aaPredicted RBP20.1■□□□□ 0.81
SNX25-204ENST00000506896 CCNYQ8ND76 341 aa20.1■□□□□ 0.81
SNX25-204ENST00000506896 MAML1Q92585 1016 aa20.1■□□□□ 0.81
SNX25-204ENST00000506896 VOPP1Q96AW1 172 aa20.1■□□□□ 0.81
SNX25-204ENST00000506896 BIRC7Q96CA5 298 aa20.1■□□□□ 0.81
SNX25-204ENST00000506896 KLHL32Q96NJ5 620 aa20.1■□□□□ 0.81
SNX25-204ENST00000506896 OLFM3Q96PB7 478 aa20.1■□□□□ 0.81
SNX25-204ENST00000506896 MGME1Q9BQP7 344 aa20.1■□□□□ 0.81
SNX25-204ENST00000506896 ATP13A3Q9H7F0 1226 aa20.1■□□□□ 0.81
SNX25-204ENST00000506896 KNL1Q8NG31 2342 aa20.1■□□□□ 0.81
SNX25-204ENST00000506896 PCNX2A6NKB5 2137 aa20.09■□□□□ 0.81
SNX25-204ENST00000506896 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.09■□□□□ 0.81
SNX25-204ENST00000506896 C16orf96A6NNT2 1141 aa20.09■□□□□ 0.81
SNX25-204ENST00000506896 C10orf142B7Z368 130 aa20.09■□□□□ 0.81
SNX25-204ENST00000506896 RNF103O00237 685 aa20.09■□□□□ 0.81
SNX25-204ENST00000506896 INSIG1O15503 277 aa20.09■□□□□ 0.81
SNX25-204ENST00000506896 AP1G1O43747 822 aa20.09■□□□□ 0.81
SNX25-204ENST00000506896 MAP3K6O95382 1288 aa20.09■□□□□ 0.81
SNX25-204ENST00000506896 IGHV4-34P06331 123 aa20.09■□□□□ 0.81
SNX25-204ENST00000506896 KRT10P13645 584 aa20.09■□□□□ 0.81
SNX25-204ENST00000506896 CD27P26842 260 aa20.09■□□□□ 0.81
SNX25-204ENST00000506896 SERPINA4P29622 427 aa20.09■□□□□ 0.81
SNX25-204ENST00000506896 PTPN7P35236 360 aa20.09■□□□□ 0.81
SNX25-204ENST00000506896 RGRP47804 291 aa20.09■□□□□ 0.81
SNX25-204ENST00000506896 SUOXP51687 545 aa20.09■□□□□ 0.81
SNX25-204ENST00000506896 DYNLT1P63172 113 aa20.09■□□□□ 0.81
SNX25-204ENST00000506896 KAZNQ674X7 775 aa20.09■□□□□ 0.81
SNX25-204ENST00000506896 PARS2Q7L3T8 475 aaKnown RBP20.09■□□□□ 0.81
SNX25-204ENST00000506896 ZSCAN30Q86W11 494 aa20.09■□□□□ 0.81
SNX25-204ENST00000506896 TRIM69Q86WT6 500 aa20.09■□□□□ 0.81
SNX25-204ENST00000506896 CCDC13Q8IYE1 715 aa20.09■□□□□ 0.81
SNX25-204ENST00000506896 C1orf216Q8TAB5 229 aa20.09■□□□□ 0.81
SNX25-204ENST00000506896 SNX19Q92543 992 aa20.09■□□□□ 0.81
SNX25-204ENST00000506896 ALS2CR12Q96Q35 445 aa20.09■□□□□ 0.81
SNX25-204ENST00000506896 SUV39H2Q9H5I1 410 aa20.09■□□□□ 0.81
SNX25-204ENST00000506896 PPP2R2CQ9Y2T4 447 aa20.09■□□□□ 0.81
SNX25-204ENST00000506896 MUSKO15146 869 aa20.08■□□□□ 0.81
SNX25-204ENST00000506896 NEBLO76041 1014 aa20.08■□□□□ 0.81
SNX25-204ENST00000506896 FTCDO95954 541 aa20.08■□□□□ 0.81
SNX25-204ENST00000506896 CFIP05156 583 aa20.08■□□□□ 0.81
SNX25-204ENST00000506896 CCNB1P14635 433 aa20.08■□□□□ 0.81
SNX25-204ENST00000506896 CR2P20023 1033 aa20.08■□□□□ 0.81
SNX25-204ENST00000506896 CES1P23141 567 aa20.08■□□□□ 0.81
SNX25-204ENST00000506896 SCNN1BP51168 640 aa20.08■□□□□ 0.81
SNX25-204ENST00000506896 TAS2R38P59533 333 aa20.08■□□□□ 0.81
SNX25-204ENST00000506896 CFAP58Q5T655 872 aa20.08■□□□□ 0.81
SNX25-204ENST00000506896 BRAT1Q6PJG6 821 aa20.08■□□□□ 0.81
SNX25-204ENST00000506896 BBS12Q6ZW61 710 aa20.08■□□□□ 0.81
SNX25-204ENST00000506896 ALG3Q92685 438 aa20.08■□□□□ 0.81
SNX25-204ENST00000506896 P3H4Q92791 437 aa20.08■□□□□ 0.81
SNX25-204ENST00000506896 NUDCD1Q96RS6 583 aa20.08■□□□□ 0.81
SNX25-204ENST00000506896 POLR1EQ9GZS1 481 aaKnown RBP20.08■□□□□ 0.81
SNX25-204ENST00000506896 LZTFL1Q9NQ48 299 aa20.08■□□□□ 0.81
SNX25-204ENST00000506896 EIF2B4Q9UI10 523 aaKnown RBP20.08■□□□□ 0.81
SNX25-204ENST00000506896 SHROOM3Q8TF72 1996 aa20.08■□□□□ 0.8
SNX25-204ENST00000506896 A0A1B0GTW7 788 aa20.07■□□□□ 0.8
SNX25-204ENST00000506896 A0A1W2PPC4 97 aa20.07■□□□□ 0.8
SNX25-204ENST00000506896 A0A1W2PQ67 120 aa20.07■□□□□ 0.8
SNX25-204ENST00000506896 TSPAN11A1L157 253 aa20.07■□□□□ 0.8
SNX25-204ENST00000506896 ARHGAP33O14559 1287 aa20.07■□□□□ 0.8
SNX25-204ENST00000506896 BCAT2O15382 392 aaPredicted RBP20.07■□□□□ 0.8
SNX25-204ENST00000506896 LATO43561 262 aa20.07■□□□□ 0.8
SNX25-204ENST00000506896 PIGNO95427 931 aa20.07■□□□□ 0.8
SNX25-204ENST00000506896 BCL2L1Q07817 233 aa20.07■□□□□ 0.8
SNX25-204ENST00000506896 PPM1JQ5JR12 505 aa20.07■□□□□ 0.8
SNX25-204ENST00000506896 TTC7BQ86TV6 843 aa20.07■□□□□ 0.8
SNX25-204ENST00000506896 PGBD5Q8N414 524 aa20.07■□□□□ 0.8
SNX25-204ENST00000506896 HES6Q96HZ4 224 aa20.07■□□□□ 0.8
SNX25-204ENST00000506896 LGMNQ99538 433 aa20.07■□□□□ 0.8
SNX25-204ENST00000506896 OSBPL8Q9BZF1 889 aa20.07■□□□□ 0.8
SNX25-204ENST00000506896 MIR1-1HGQ9H1L0 117 aa20.07■□□□□ 0.8
SNX25-204ENST00000506896 SCUBE2Q9NQ36 999 aa20.07■□□□□ 0.8
SNX25-204ENST00000506896 FSCN3Q9NQT6 498 aa20.07■□□□□ 0.8
SNX25-204ENST00000506896 FADS3Q9Y5Q0 445 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms