RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 SLC45A4Q5BKX6 768 aa16.95■□□□□ 0.3
PDLIM7-215ENST00000506161 PPP6R3Q5H9R7 873 aaPredicted RBP16.95■□□□□ 0.3
PDLIM7-215ENST00000506161 GDPD4Q6W3E5 623 aa16.95■□□□□ 0.3
PDLIM7-215ENST00000506161 TMPRSS7Q7RTY8 843 aa16.95■□□□□ 0.3
PDLIM7-215ENST00000506161 TSC1Q92574 1164 aa16.95■□□□□ 0.3
PDLIM7-215ENST00000506161 FUBP1Q96AE4 644 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-215ENST00000506161 BBC3Q96PG8 261 aaPredicted RBP16.95■□□□□ 0.3
PDLIM7-215ENST00000506161 XPO4Q9C0E2 1151 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-215ENST00000506161 CCDC86Q9H6F5 360 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-215ENST00000506161 HPCAL4Q9UM19 191 aa16.95■□□□□ 0.3
PDLIM7-215ENST00000506161 CAPN11Q9UMQ6 739 aa16.95■□□□□ 0.3
PDLIM7-215ENST00000506161 TTC24A2A3L6 582 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-215ENST00000506161 MMP20O60882 483 aa16.94■□□□□ 0.3
PDLIM7-215ENST00000506161 AMPD1P23109 780 aa16.94■□□□□ 0.3
PDLIM7-215ENST00000506161 AKT2P31751 481 aa16.94■□□□□ 0.3
PDLIM7-215ENST00000506161 CASP14P31944 242 aa16.94■□□□□ 0.3
PDLIM7-215ENST00000506161 IGFALSP35858 605 aa16.94■□□□□ 0.3
PDLIM7-215ENST00000506161 NUDT1P36639 197 aa16.94■□□□□ 0.3
PDLIM7-215ENST00000506161 GEMIN4P57678 1058 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-215ENST00000506161 CAMK2BQ13554 666 aa16.94■□□□□ 0.3
PDLIM7-215ENST00000506161 FZD2Q14332 565 aa16.94■□□□□ 0.3
PDLIM7-215ENST00000506161 INO80DQ53TQ3 878 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-215ENST00000506161 KIAA1161Q6NSJ0 714 aa16.94■□□□□ 0.3
PDLIM7-215ENST00000506161 Q6ZSR6 202 aa16.94■□□□□ 0.3
PDLIM7-215ENST00000506161 TSEN2Q8NCE0 465 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-215ENST00000506161 HNRNPLLQ8WVV9 542 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-215ENST00000506161 SKA1Q96BD8 255 aa16.94■□□□□ 0.3
PDLIM7-215ENST00000506161 GDAP1L1Q96MZ0 367 aa16.94■□□□□ 0.3
PDLIM7-215ENST00000506161 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.94■□□□□ 0.3
PDLIM7-215ENST00000506161 PACSIN1Q9BY11 444 aa16.94■□□□□ 0.3
PDLIM7-215ENST00000506161 MBNL1Q9NR56 388 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-215ENST00000506161 UBA2Q9UBT2 640 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-215ENST00000506161 COQ6Q9Y2Z9 468 aa16.94■□□□□ 0.3
PDLIM7-215ENST00000506161 IGSF10Q6WRI0 2623 aa16.94■□□□□ 0.3
PDLIM7-215ENST00000506161 LY6G6EA0A0G2JKS1 128 aa16.93■□□□□ 0.3
PDLIM7-215ENST00000506161 ZSCAN5CA6NGD5 496 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-215ENST00000506161 LDOC1O95751 146 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-215ENST00000506161 IGSF6O95976 241 aa16.93■□□□□ 0.3
PDLIM7-215ENST00000506161 RARAP10276 462 aa16.93■□□□□ 0.3
PDLIM7-215ENST00000506161 DGKAP23743 735 aa16.93■□□□□ 0.3
PDLIM7-215ENST00000506161 NDST2P52849 883 aa16.93■□□□□ 0.3
PDLIM7-215ENST00000506161 RPS21P63220 83 aaKnown RBP16.93■□□□□ 0.3
PDLIM7-215ENST00000506161 ZBED6P86452 979 aa16.93■□□□□ 0.3
PDLIM7-215ENST00000506161 SLC25A11Q02978 314 aaKnown RBP16.93■□□□□ 0.3
PDLIM7-215ENST00000506161 OVGP1Q12889 678 aa16.93■□□□□ 0.3
PDLIM7-215ENST00000506161 PROX2Q3B8N5 592 aa16.93■□□□□ 0.3
PDLIM7-215ENST00000506161 KYAT3Q6YP21 454 aaKnown RBP16.93■□□□□ 0.3
PDLIM7-215ENST00000506161 PTAR1Q7Z6K3 402 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-215ENST00000506161 MDM1Q8TC05 714 aa16.93■□□□□ 0.3
PDLIM7-215ENST00000506161 LRIG1Q96JA1 1093 aa16.93■□□□□ 0.3
PDLIM7-215ENST00000506161 WRAP53Q9BUR4 548 aaKnown RBP16.93■□□□□ 0.3
PDLIM7-215ENST00000506161 TCEAL2Q9H3H9 227 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-215ENST00000506161 ZWILCHQ9H900 591 aa16.93■□□□□ 0.3
PDLIM7-215ENST00000506161 U3KQA8 63 aa16.93■□□□□ 0.3
PDLIM7-215ENST00000506161 ASH1LQ9NR48 2969 aaKnown RBP16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 TSPAN11A1L157 253 aa16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 A6NNZ2 444 aa16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 DFFAO00273 331 aa16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 SIGLEC6O43699 453 aa16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 PRPSAP2O60256 369 aa16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 PIAS2O75928 621 aa16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 RNF8O76064 485 aa16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 PEX11BO96011 259 aa16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 SERPING1P05155 500 aa16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 CD48P09326 243 aa16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 ARRB1P49407 418 aaPredicted RBP16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 EIF2B5Q13144 721 aaKnown RBP16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 SMAD1Q15797 465 aaKnown RBP16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 ATP13A4Q4VNC1 1196 aa16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 KCTD16Q68DU8 428 aa16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 PPP1R2P3Q6NXS1 205 aa16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 CAMK1DQ8IU85 385 aa16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 TP53I13Q8NBR0 393 aaPredicted RBP16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 CASKIN2Q8WXE0 1202 aa16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 HSPH1Q92598 858 aa16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 SYN2Q92777 582 aaPredicted RBP16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 CENPTQ96BT3 561 aa16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 FEM1CQ96JP0 617 aa16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 NUP85Q9BW27 656 aa16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 KLHL11Q9NVR0 708 aa16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 HS3ST3A1Q9Y663 406 aa16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 SCINQ9Y6U3 715 aa16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 ASXL3Q9C0F0 2248 aa16.92■□□□□ 0.3
PDLIM7-215ENST00000506161 CASC3O15234 703 aaKnown RBP16.91■□□□□ 0.3
PDLIM7-215ENST00000506161 YKT6O15498 198 aa16.91■□□□□ 0.3
PDLIM7-215ENST00000506161 FFAR2O15552 330 aa16.91■□□□□ 0.3
PDLIM7-215ENST00000506161 TSPAN6O43657 245 aa16.91■□□□□ 0.3
PDLIM7-215ENST00000506161 NEBLO76041 1014 aa16.91■□□□□ 0.3
PDLIM7-215ENST00000506161 CYP1A2P05177 515 aa16.91■□□□□ 0.3
PDLIM7-215ENST00000506161 HTR7P34969 479 aa16.91■□□□□ 0.3
PDLIM7-215ENST00000506161 PFN3P60673 137 aa16.91■□□□□ 0.3
PDLIM7-215ENST00000506161 MMRN1Q13201 1228 aa16.91■□□□□ 0.3
PDLIM7-215ENST00000506161 DPYSL2Q16555 572 aa16.91■□□□□ 0.3
PDLIM7-215ENST00000506161 POLNQ7Z5Q5 900 aa16.91■□□□□ 0.3
PDLIM7-215ENST00000506161 TTC7BQ86TV6 843 aa16.91■□□□□ 0.3
PDLIM7-215ENST00000506161 VPS36Q86VN1 386 aa16.91■□□□□ 0.3
PDLIM7-215ENST00000506161 RBFAQ8N0V3 343 aa16.91■□□□□ 0.3
PDLIM7-215ENST00000506161 PGBD5Q8N414 524 aa16.91■□□□□ 0.3
PDLIM7-215ENST00000506161 OXR1Q8N573 874 aa16.91■□□□□ 0.3
PDLIM7-215ENST00000506161 OSBPL1AQ9BXW6 950 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms