RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 PAPD7Q5XG87 772 aaKnown RBP12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 DARS2Q6PI48 645 aaKnown RBP12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 CDKL3Q8IVW4 592 aaPredicted RBP12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 HTR3CQ8WXA8 447 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 ATOH1Q92858 354 aaPredicted RBP12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 ARRDC3Q96B67 414 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 ZC3H10Q96K80 434 aaKnown RBP12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 TEKT5Q96M29 485 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 KLHL32Q96NJ5 620 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 OSBPL9Q96SU4 736 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 SEMA3CQ99985 751 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 FERMT1Q9BQL6 677 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 HDAC8Q9BY41 377 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 NEUROG2Q9H2A3 272 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 SEMA4AQ9H3S1 761 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 SUV39H2Q9H5I1 410 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 ATP13A3Q9H7F0 1226 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 SGK2Q9HBY8 427 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 DYRK4Q9NR20 520 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 DKK3Q9UBP4 350 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 SERGEFQ9UGK8 458 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 MBD1Q9UIS9 605 aaPredicted RBP12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 TTC7AQ9ULT0 858 aaPredicted RBP12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 INVSQ9Y283 1065 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 R3HDM2Q9Y2K5 976 aaKnown RBP12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 R4GN57 208 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 SCN8AQ9UQD0 1980 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 TDRD6O60522 2096 aaKnown RBP12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 KNL1Q8NG31 2342 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 TMEM131Q92545 1883 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 MYLKQ15746 1914 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 TSPAN11A1L157 253 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 CTAGE9A4FU28 777 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 SOCS5O75159 536 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 GJB3O75712 270 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 FGGP02679 453 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 UGT2B4P06133 528 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 TCP1P17987 556 aaKnown RBP12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 BCKDHBP21953 392 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 RBL1P28749 1068 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 SERPINA4P29622 427 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 ETF1P62495 437 aaKnown RBP12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 BCL2L1Q07817 233 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 ITKQ08881 620 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 CCNG2Q16589 344 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 POM121L1PQ3SYA9 428 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 SPDYCQ5MJ68 293 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 PIP5KL1Q5T9C9 394 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 AGBL4Q5VU57 503 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 ERN2Q76MJ5 926 aaKnown RBP12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 FAM160A2Q8N612 972 aaPredicted RBP12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 FRMD1Q8N878 549 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 ARRDC2Q8TBH0 407 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 GANCQ8TET4 914 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 NKD2Q969F2 451 aaPredicted RBP12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 RAB7BQ96AH8 199 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 TOE1Q96GM8 510 aaKnown RBP12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 NSMCE3Q96MG7 304 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 AGAP3Q96P47 875 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 NAPGQ99747 312 aaPredicted RBP12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 FAM118BQ9BPY3 351 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 BTBD1Q9H0C5 482 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 PCED1AQ9H1Q7 454 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 EPC1Q9H2F5 836 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 KDM4CQ9H3R0 1056 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 USP29Q9HBJ7 922 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 NOD2Q9HC29 1040 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 SEPT10Q9P0V9 454 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 TRHDEQ9UKU6 1024 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 DNPEPQ9ULA0 475 aa12.03□□□□□ -0.48
PDLIM5-208ENST00000504489 OTOGLQ3ZCN5 2332 aa12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 A0A1W2PQ67 120 aa12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 TTC24A2A3L6 582 aaPredicted RBP12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 C16orf96A6NNT2 1141 aa12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 PLK4O00444 970 aa12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 TRAFD1O14545 582 aaPredicted RBP12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 HTRA2O43464 458 aaPredicted RBP12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 PLRG1O43660 514 aaKnown RBP12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 LIASO43766 372 aa12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 NDUFS2O75306 463 aa12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 PIGNO95427 931 aa12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 ACSL1P33121 698 aa12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 SUOXP51687 545 aa12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 NEK3P51956 506 aa12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 DSC2Q02487 901 aa12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 NIPAL4Q0D2K0 466 aa12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 SIM2Q14190 667 aaPredicted RBP12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 OASLQ15646 514 aaKnown RBP12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 SLC14A2Q15849 920 aa12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 LONRF2Q1L5Z9 754 aa12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 FBXL19Q6PCT2 694 aa12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 DRICH1Q6PGQ1 229 aaPredicted RBP12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 BRAT1Q6PJG6 821 aa12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 NYAP1Q6ZVC0 841 aa12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 CEP68Q76N32 757 aa12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 ADAT2Q7Z6V5 191 aaKnown RBP12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 FAM124AQ86V42 546 aa12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 CAMK1DQ8IU85 385 aa12.02□□□□□ -0.49
PDLIM5-208ENST00000504489 ZNF567Q8N184 647 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms