RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 CRNNQ9UBG3 495 aaPredicted RBP18■□□□□ 0.47
POLR2J3-209ENST00000504157 CPSF3Q9UKF6 684 aaKnown RBP18■□□□□ 0.47
POLR2J3-209ENST00000504157 SCN9AQ15858 1988 aa18■□□□□ 0.47
POLR2J3-209ENST00000504157 A6NL46 340 aa18■□□□□ 0.47
POLR2J3-209ENST00000504157 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18■□□□□ 0.47
POLR2J3-209ENST00000504157 PIK3R2O00459 728 aa18■□□□□ 0.47
POLR2J3-209ENST00000504157 OGTO15294 1046 aa18■□□□□ 0.47
POLR2J3-209ENST00000504157 PHGDHO43175 533 aaKnown RBP18■□□□□ 0.47
POLR2J3-209ENST00000504157 RASAL1O95294 804 aa18■□□□□ 0.47
POLR2J3-209ENST00000504157 CHRNGP07510 517 aa18■□□□□ 0.47
POLR2J3-209ENST00000504157 RALGDSQ12967 914 aa18■□□□□ 0.47
POLR2J3-209ENST00000504157 TRIM32Q13049 653 aa18■□□□□ 0.47
POLR2J3-209ENST00000504157 CCDC14Q49A88 953 aa18■□□□□ 0.47
POLR2J3-209ENST00000504157 XAF1Q6GPH4 301 aa18■□□□□ 0.47
POLR2J3-209ENST00000504157 KIAA0408Q6ZU52 694 aa18■□□□□ 0.47
POLR2J3-209ENST00000504157 USP51Q70EK9 711 aa18■□□□□ 0.47
POLR2J3-209ENST00000504157 CHST15Q7LFX5 561 aaPredicted RBP18■□□□□ 0.47
POLR2J3-209ENST00000504157 SPRED1Q7Z699 444 aa18■□□□□ 0.47
POLR2J3-209ENST00000504157 OR2T34Q8NGX1 318 aa18■□□□□ 0.47
POLR2J3-209ENST00000504157 OR2T3Q8NH03 318 aa18■□□□□ 0.47
POLR2J3-209ENST00000504157 SNRNP25Q9BV90 132 aaKnown RBP18■□□□□ 0.47
POLR2J3-209ENST00000504157 GLIS2Q9BZE0 524 aaPredicted RBP18■□□□□ 0.47
POLR2J3-209ENST00000504157 CPNE5Q9HCH3 593 aa18■□□□□ 0.47
POLR2J3-209ENST00000504157 SPAG4Q9NPE6 437 aa18■□□□□ 0.47
POLR2J3-209ENST00000504157 AGPAT4Q9NRZ5 378 aa18■□□□□ 0.47
POLR2J3-209ENST00000504157 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18■□□□□ 0.47
POLR2J3-209ENST00000504157 SFMBT1Q9UHJ3 866 aa18■□□□□ 0.47
POLR2J3-209ENST00000504157 GTF2IRD1Q9UHL9 959 aa18■□□□□ 0.47
POLR2J3-209ENST00000504157 A0A0A0MRY4 1105 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 KCNU1A8MYU2 1149 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 M0QYV0 167 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 SCO2O43819 266 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 SUPT20HL2P0C7V6 817 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 DPEP1P16444 411 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 CYP2F1P24903 491 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 CHRNEQ04844 493 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 LRIT3Q3SXY7 679 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 SUPT20HL1Q3ZLR7 823 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 CMC1Q7Z7K0 106 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 DHFR2Q86XF0 187 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 OFCC1Q8IZS5 231 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 CPXCR1Q8N123 301 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 MFSD4AQ8N468 514 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 DHRSXQ8N5I4 330 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 CERS2Q96G23 380 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 MAGED4Q96JG8 741 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 CDHR1Q96JP9 859 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 SPATA13Q96N96 652 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 CLSTN3Q9BQT9 956 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 LHPPQ9H008 270 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 NMRAL1Q9HBL8 299 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 GPATCH2LQ9NWQ4 482 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 RNF103-CHMP3A0A140T963 221 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 LOC105371267A0A1B0GV96 52 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 FAM172BPA6NC97 362 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 TTC34A8MYJ7 566 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 HACD1B0YJ81 288 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 AREL1O15033 823 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 B4GALT4O60513 344 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 TNNC2P02585 160 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 POLBP06746 335 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 MGAT1P26572 445 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 EPHX2P34913 555 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 GMPRP36959 345 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 NR4A2P43354 598 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 KRT6CP48668 564 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 STX5Q13190 355 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 CYBRD1Q53TN4 286 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 SAMD4BQ5PRF9 694 aaKnown RBP17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 LIPMQ5VYY2 423 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 HEATR6Q6AI08 1181 aaKnown RBP17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 NXNQ6DKJ4 435 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 KIAA2013Q8IYS2 634 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 CLIP4Q8N3C7 705 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 TP53INP1Q96A56 240 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 FKBP10Q96AY3 582 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 NACC2Q96BF6 587 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 MARK4Q96L34 752 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 RNF38Q9H0F5 515 aa17.99■□□□□ 0.47
POLR2J3-209ENST00000504157 SSC5DA1L4H1 1573 aa17.98■□□□□ 0.47
POLR2J3-209ENST00000504157 DYTNA2CJ06 578 aa17.98■□□□□ 0.47
POLR2J3-209ENST00000504157 RNF103O00237 685 aa17.98■□□□□ 0.47
POLR2J3-209ENST00000504157 BCAS1O75363 584 aaPredicted RBP17.98■□□□□ 0.47
POLR2J3-209ENST00000504157 MAP3K6O95382 1288 aa17.98■□□□□ 0.47
POLR2J3-209ENST00000504157 NTRK1P04629 796 aa17.98■□□□□ 0.47
POLR2J3-209ENST00000504157 NR3C2P08235 984 aa17.98■□□□□ 0.47
POLR2J3-209ENST00000504157 SERPINB1P30740 379 aa17.98■□□□□ 0.47
POLR2J3-209ENST00000504157 YAP1P46937 504 aaKnown RBP17.98■□□□□ 0.47
POLR2J3-209ENST00000504157 NKX2-5P52952 324 aaPredicted RBP17.98■□□□□ 0.47
POLR2J3-209ENST00000504157 TFAMQ00059 246 aaKnown RBP17.98■□□□□ 0.47
POLR2J3-209ENST00000504157 GBE1Q04446 702 aa17.98■□□□□ 0.47
POLR2J3-209ENST00000504157 AQP6Q13520 282 aa17.98■□□□□ 0.47
POLR2J3-209ENST00000504157 CA9Q16790 459 aa17.98■□□□□ 0.47
POLR2J3-209ENST00000504157 BROXQ5VW32 411 aa17.98■□□□□ 0.47
POLR2J3-209ENST00000504157 ZYG11AQ6WRX3 759 aa17.98■□□□□ 0.47
POLR2J3-209ENST00000504157 FAM183BPQ6ZVS7 135 aa17.98■□□□□ 0.47
POLR2J3-209ENST00000504157 NEK10Q6ZWH5 1172 aa17.98■□□□□ 0.47
POLR2J3-209ENST00000504157 SNX29P2Q8IUI4 249 aa17.98■□□□□ 0.47
POLR2J3-209ENST00000504157 ARMC8Q8IUR7 673 aa17.98■□□□□ 0.47
POLR2J3-209ENST00000504157 LRRC49Q8IUZ0 686 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms