RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 MFSD2AQ8NA29 543 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF516Q92618 1163 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 FAM84AQ96KN4 292 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 NEURL2Q9BR09 285 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 PXMP2Q9NR77 195 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 KCNN3Q9UGI6 736 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 GLS2Q9UI32 602 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 ANAPC2Q9UJX6 822 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 UGT2A1Q9Y4X1 527 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 DOPEY1Q5JWR5 2465 aa2.82□□□□□ -1.96
NEDD4-204ENST00000503468 FLNCQ14315 2725 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 AP3B1O00203 1094 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 NCK2O43639 380 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SNX2O60749 519 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 MRPS14O60783 128 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 PEX14O75381 377 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 RECKO95980 971 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SNRPAP09012 282 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 EEF2P13639 858 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 HOXB8P17481 243 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 VARSP26640 1264 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 PTPN6P29350 595 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 NMT1P30419 496 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 ADRA1AP35348 466 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 GP5P40197 560 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 MAGEA2P43356 314 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 HAND2P61296 217 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 PURAQ00577 322 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 TAGLNQ01995 201 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SP2Q02086 613 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 C19orf57Q0VDD7 668 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 HSPA14Q0VDF9 509 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 DGKDQ16760 1214 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 RFX4Q33E94 735 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 ANKRD40Q6AI12 368 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SP5Q6BEB4 398 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 KIAA0408Q6ZU52 694 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SLC51BQ86UW2 128 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 CENPSQ8N2Z9 138 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 ASCC1Q8N9N2 400 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 GALNT11Q8NCW6 608 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 GDPD5Q8WTR4 605 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 CHURC1Q8WUH1 139 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 NCLNQ969V3 563 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 FAM149B1Q96BN6 582 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SLC10A4Q96EP9 437 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 ASIC4Q96FT7 647 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 TXNDC15Q96J42 360 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 ORAI3Q9BRQ5 295 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 HERPUD2Q9BSE4 406 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 C17orf80Q9BSJ5 609 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 IER2Q9BTL4 223 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SLC2A11Q9BYW1 496 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 PDGFDQ9GZP0 370 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 CDH19Q9H159 772 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 EFCAB1Q9HAE3 211 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF304Q9HCX3 659 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 THAP1Q9NVV9 213 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 LHX6Q9UPM6 363 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SNX5Q9Y5X3 404 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 MN1Q10571 1320 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 TYW5A2RUC4 315 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 FAM196BA6NMK8 535 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SNTNA6NMZ2 147 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 BET1O15155 118 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 DYRK3O43781 588 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SCO2O43819 266 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 CLPXO76031 633 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 PGM3O95394 542 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 PTTG1O95997 202 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 ALDH1A1P00352 501 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 PYGMP11217 842 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 BMP1P13497 986 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 TBXAS1P24557 533 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 RORAP35398 523 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 BAG6P46379 1132 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 ALDH1A3P47895 512 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 ENTPD1P49961 510 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 KPNA2P52292 529 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 PFKPQ01813 784 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SCRN3Q0VDG4 424 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 TOP3AQ13472 1001 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 ATP1A4Q13733 1029 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 NFE2Q16621 373 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SLC25A30Q5SVS4 291 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF618Q5T7W0 954 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 LIN9Q5TKA1 542 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 HACD2Q6Y1H2 254 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SVOPQ8N4V2 548 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 AMER2Q8N7J2 671 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 ANKRD53Q8N9V6 530 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 GABPB2Q8TAK5 448 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 U2AF1L4Q8WU68 220 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 PDCD6IPQ8WUM4 868 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SEPT1Q8WYJ6 367 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 GLG1Q92896 1179 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 E2F7Q96AV8 911 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 C9orf16Q9BUW7 83 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SPRY4Q9C004 299 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms