RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 REEP1Q9H902 201 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 ZMYND8Q9ULU4 1186 aaPredicted RBP16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 TRAV19A0A0A6YYK7 116 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 AHCYL1O43865 530 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 EPN2O95208 641 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 BPGMP07738 259 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 TRAF3Q13114 568 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 NOMO1Q15155 1222 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 TSNQ15631 228 aaKnown RBP16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 CRY1Q16526 586 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 RSBN1Q5VWQ0 802 aaPredicted RBP16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 SYT12Q8IV01 421 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 MRPL45Q9BRJ2 306 aaKnown RBP16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 TBCDQ9BTW9 1192 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 ARL15Q9NXU5 204 aa16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 ZNF214Q9UL59 606 aaPredicted RBP16.29■□□□□ 0.2
HMGXB3-202ENST00000503427 ERCC2P18074 760 aa16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 HPCAL1P37235 193 aa16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 RFX3P48380 749 aa16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 ALDH9A1P49189 494 aa16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 TRMT11Q7Z4G4 463 aaKnown RBP16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 ZNF605Q86T29 641 aa16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 PHACTR4Q8IZ21 702 aa16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 SLC44A1Q8WWI5 657 aa16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 SLC17A7Q9P2U7 560 aa16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 TRAFD1O14545 582 aaPredicted RBP16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 TRIM25Q14258 630 aaKnown RBP16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 MON1AQ86VX9 555 aa16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 ZNF614Q8N883 585 aa16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 TSEN34Q9BSV6 310 aaKnown RBP16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 SYNDIG1Q9H7V2 258 aa16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 CILPO75339 1184 aa16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 TYMPP19971 482 aa16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 CCL23P55773 120 aa16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 SPANXN2Q5MJ10 180 aa16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 METTL3Q86U44 580 aaKnown RBP16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 C10orf107Q8IVU9 208 aa16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 PCDH18Q9HCL0 1135 aa16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 AVILO75366 819 aa16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 HDCP19113 662 aa16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 POLR2EP19388 210 aaKnown RBP16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 MAGEA10P43363 369 aaPredicted RBP16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 INO80DQ53TQ3 878 aaPredicted RBP16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 ZCCHC8Q6NZY4 707 aaKnown RBP16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 KRT73Q86Y46 540 aa16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 CDK20Q8IZL9 346 aa16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 SPPL2BQ8TCT7 592 aa16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 CDH19Q9H159 772 aa16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 PDZD7Q9H5P4 517 aa16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 MAN1C1Q9NR34 630 aa16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 RPS6KB2Q9UBS0 482 aa16.28■□□□□ 0.2
HMGXB3-202ENST00000503427 ASNA1O43681 348 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 SNAP91O60641 907 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 PEX11AO75192 247 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 PCDH8O95206 1070 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 JAM2P57087 298 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 PSMD5Q16401 504 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 SLC25A52Q3SY17 297 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 C16orf59Q7L2K0 433 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 JOSD2Q8TAC2 188 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 RNFT2Q96EX2 444 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 IKZF4Q9H2S9 585 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 ATAD3AQ9NVI7 634 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 XPR1Q9UBH6 696 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 KLQ9UEF7 1012 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 CNTNAP1P78357 1384 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 ANXA5P08758 320 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 ACADMP11310 421 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 CYP3A5P20815 502 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 PTPN3P26045 913 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 PTP4A2Q12974 167 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 ANGPT1Q15389 498 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 ABRAXAS1Q6UWZ7 409 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 USP45Q70EL2 814 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 FIBCD1Q8N539 461 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 FBXO30Q8TB52 745 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 RCN3Q96D15 328 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 ASAH2Q9NR71 780 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 MAPRE3Q9UPY8 281 aa16.27■□□□□ 0.2
HMGXB3-202ENST00000503427 NFKBIEO00221 500 aa16.27■□□□□ 0.19
HMGXB3-202ENST00000503427 ADH1AP07327 375 aa16.27■□□□□ 0.19
HMGXB3-202ENST00000503427 TAF5Q15542 800 aa16.27■□□□□ 0.19
HMGXB3-202ENST00000503427 TIMM50Q3ZCQ8 353 aa16.27■□□□□ 0.19
HMGXB3-202ENST00000503427 POTEHQ6S545 545 aa16.27■□□□□ 0.19
HMGXB3-202ENST00000503427 FGD2Q7Z6J4 655 aa16.27■□□□□ 0.19
HMGXB3-202ENST00000503427 DPP10Q8N608 796 aa16.27■□□□□ 0.19
HMGXB3-202ENST00000503427 OSBPL11Q9BXB4 747 aa16.27■□□□□ 0.19
HMGXB3-202ENST00000503427 SLC4A5Q9BY07 1137 aa16.27■□□□□ 0.19
HMGXB3-202ENST00000503427 FBXO5Q9UKT4 447 aa16.27■□□□□ 0.19
HMGXB3-202ENST00000503427 R3HDM2Q9Y2K5 976 aaKnown RBP16.27■□□□□ 0.19
HMGXB3-202ENST00000503427 FZD9O00144 591 aa16.27■□□□□ 0.19
HMGXB3-202ENST00000503427 EPHA3P29320 983 aa16.27■□□□□ 0.19
HMGXB3-202ENST00000503427 EIF2B5Q13144 721 aaKnown RBP16.27■□□□□ 0.19
HMGXB3-202ENST00000503427 PDZK1Q5T2W1 519 aa16.27■□□□□ 0.19
HMGXB3-202ENST00000503427 AFTPHQ6ULP2 937 aa16.27■□□□□ 0.19
HMGXB3-202ENST00000503427 MTSS1LQ765P7 747 aa16.27■□□□□ 0.19
HMGXB3-202ENST00000503427 CLNKQ7Z7G1 428 aa16.27■□□□□ 0.19
HMGXB3-202ENST00000503427 TNS4Q8IZW8 715 aa16.27■□□□□ 0.19
HMGXB3-202ENST00000503427 NKD2Q969F2 451 aaPredicted RBP16.27■□□□□ 0.19
HMGXB3-202ENST00000503427 PPP3R2Q96LZ3 170 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms