RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 SRRM3A6NNA2 597 aaPredicted RBP9.16□□□□□ -0.94
NR1I3-216ENST00000502848 HEPACAM2A8MVW5 462 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 WASH3PC4AMC7 463 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 NPC1O15118 1278 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 MUSKO15146 869 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 HTRA2O43464 458 aaPredicted RBP9.16□□□□□ -0.94
NR1I3-216ENST00000502848 ATP9BO43861 1147 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 SNAP91O60641 907 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 TBX10O75333 385 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 PMPCBO75439 489 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 BANF1O75531 89 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 KRT37O76014 449 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 KRT38O76015 456 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 CRTAMO95727 393 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 ATP5BP06576 529 aaKnown RBP9.16□□□□□ -0.94
NR1I3-216ENST00000502848 ATXN1LP0C7T5 689 aaKnown RBP9.16□□□□□ -0.94
NR1I3-216ENST00000502848 LAMP2P13473 410 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 PSMC3P17980 439 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 NR1D1P20393 614 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 NFKBIAP25963 317 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 GCAP28676 217 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 CD70P32970 193 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 NNMTP40261 264 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 GRIA4P48058 902 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 POLD2P49005 469 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 DGKGP49619 791 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 CSE1LP55060 971 aaKnown RBP9.16□□□□□ -0.94
NR1I3-216ENST00000502848 SNRPD1P62314 119 aaKnown RBP9.16□□□□□ -0.94
NR1I3-216ENST00000502848 ECT2LQ008S8 904 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 RAD51Q06609 339 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 ITKQ08881 620 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 MSLNQ13421 630 aaPredicted RBP9.16□□□□□ -0.94
NR1I3-216ENST00000502848 CBX2Q14781 532 aaPredicted RBP9.16□□□□□ -0.94
NR1I3-216ENST00000502848 UGP2Q16851 508 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 LONRF1Q17RB8 773 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 KCTD19Q17RG1 926 aaPredicted RBP9.16□□□□□ -0.94
NR1I3-216ENST00000502848 KBTBD12Q3ZCT8 623 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 FUT11Q495W5 492 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 ANKRD20A4Q4UJ75 823 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 C22orf39Q6P5X5 142 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 NUDT18Q6ZVK8 323 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 GET4Q7L5D6 327 aaPredicted RBP9.16□□□□□ -0.94
NR1I3-216ENST00000502848 SRLQ86TD4 932 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 CNTN4Q8IWV2 1026 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 APCDD1Q8J025 514 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 MPP5Q8N3R9 675 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 SH2D3CQ8N5H7 860 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 OR2AP1Q8NGE2 309 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 CALML6Q8TD86 181 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 BRSK1Q8TDC3 778 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 HCAR2Q8TDS4 363 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 EPS8L3Q8TE67 593 aaKnown RBP9.16□□□□□ -0.94
NR1I3-216ENST00000502848 DCAKDQ8WVC6 231 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 SUSD6Q92537 303 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 ARL8AQ96BM9 186 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 CERS2Q96G23 380 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 ZNF641Q96N77 438 aaPredicted RBP9.16□□□□□ -0.94
NR1I3-216ENST00000502848 CPNE1Q99829 537 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 FAM167BQ9BTA0 163 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 IGFLR1Q9H665 355 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 ATP13A3Q9H7F0 1226 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 NOD2Q9HC29 1040 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 TRPV5Q9NQA5 729 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 TREX1Q9NSU2 369 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 MKS1Q9NXB0 559 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 ZFATQ9P243 1243 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 SMG5Q9UPR3 1016 aaKnown RBP9.16□□□□□ -0.94
NR1I3-216ENST00000502848 WNT6Q9Y6F9 365 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 RPS6KL1Q9Y6S9 549 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 DENND4AQ7Z401 1863 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 TRANK1O15050 2925 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 RFXAPO00287 272 aa9.15□□□□□ -0.94
NR1I3-216ENST00000502848 LINC01565O15544 149 aa9.15□□□□□ -0.94
NR1I3-216ENST00000502848 SLC7A4O43246 635 aa9.15□□□□□ -0.94
NR1I3-216ENST00000502848 FZD6O60353 706 aa9.15□□□□□ -0.94
NR1I3-216ENST00000502848 POP4O95707 220 aaKnown RBP9.15□□□□□ -0.94
NR1I3-216ENST00000502848 SNRPAP09012 282 aaKnown RBP9.15□□□□□ -0.94
NR1I3-216ENST00000502848 DLDP09622 509 aaKnown RBP9.15□□□□□ -0.94
NR1I3-216ENST00000502848 CISD3P0C7P0 127 aa9.15□□□□□ -0.94
NR1I3-216ENST00000502848 SRCP12931 536 aa9.15□□□□□ -0.94
NR1I3-216ENST00000502848 POLR2EP19388 210 aaKnown RBP9.15□□□□□ -0.94
NR1I3-216ENST00000502848 GLDCP23378 1020 aa9.15□□□□□ -0.94
NR1I3-216ENST00000502848 SERPINA4P29622 427 aa9.15□□□□□ -0.94
NR1I3-216ENST00000502848 GP5P40197 560 aa9.15□□□□□ -0.94
NR1I3-216ENST00000502848 SCNN1BP51168 640 aa9.15□□□□□ -0.94
NR1I3-216ENST00000502848 MAXP61244 160 aa9.15□□□□□ -0.94
NR1I3-216ENST00000502848 SPARCL1Q14515 664 aa9.15□□□□□ -0.94
NR1I3-216ENST00000502848 SIRPB2Q5JXA9 342 aa9.15□□□□□ -0.94
NR1I3-216ENST00000502848 CERCAMQ5T4B2 595 aa9.15□□□□□ -0.94
NR1I3-216ENST00000502848 SYCP2LQ5T4T6 812 aa9.15□□□□□ -0.94
NR1I3-216ENST00000502848 UBAP2Q5T6F2 1119 aaKnown RBP9.15□□□□□ -0.94
NR1I3-216ENST00000502848 TSTD2Q5T7W7 516 aa9.15□□□□□ -0.94
NR1I3-216ENST00000502848 VITQ6UXI7 678 aa9.15□□□□□ -0.94
NR1I3-216ENST00000502848 TIFABQ6ZNK6 161 aa9.15□□□□□ -0.94
NR1I3-216ENST00000502848 ADIPOR2Q86V24 386 aa9.15□□□□□ -0.94
NR1I3-216ENST00000502848 TRABD2AQ86V40 505 aa9.15□□□□□ -0.94
NR1I3-216ENST00000502848 LCA5Q86VQ0 697 aa9.15□□□□□ -0.94
NR1I3-216ENST00000502848 YAF2Q8IY57 180 aa9.15□□□□□ -0.94
NR1I3-216ENST00000502848 RAVER1Q8IY67 606 aaKnown RBP9.15□□□□□ -0.94
NR1I3-216ENST00000502848 ACMSDQ8TDX5 336 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms