RNA–Protein interactions for RNA: ENST00000502840.5

CDC42SE2-205, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-205ENST00000502840 ARHGEF17Q96PE2 2063 aaPredicted RBP3.29□□□□□ -1.88
CDC42SE2-205ENST00000502840 SIPA1L3O60292 1781 aaPredicted RBP3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 COL18A1P39060 1754 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 CRYBG1Q9Y4K1 1723 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 FLT1P17948 1338 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 PDS5AQ29RF7 1337 aaKnown RBP3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 ADGRA2Q96PE1 1338 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 USP54Q70EL1 1684 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 GXYLT2A0PJZ3 443 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 FAM90A18PA6NE21 464 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 FAM90A16PA6NEW6 464 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 GOLGA6L10A6NI86 522 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 FAM90A9PA6NNJ1 464 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 LRRIQ3A6PVS8 624 aaPredicted RBP3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 FAM90A5PA8MXJ8 464 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 TCP10L2B9ZVM9 353 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 GOLGA8KD6RF30 607 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 H0YHG0 523 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 PSMD14O00487 310 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 ZBTB5O15062 677 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 SLC16A3O15427 465 aaKnown RBP3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 SLC37A4O43826 429 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 CCNT2O60583 730 aaKnown RBP3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 COQ9O75208 318 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 GFPT2O94808 682 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 KIAA0754O94854 1291 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 GCNT3O95395 438 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 VNN1O95497 513 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 GNA14O95837 355 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 IGLV2-14P01704 120 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 SERPING1P05155 500 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 CHRM2P08172 466 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 FAM90A15PP0C7V4 464 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 FAM90A14PP0C7W9 464 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 PDHBP11177 359 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 ACTN1P12814 892 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 TCP1P17987 556 aaKnown RBP3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 RBL1P28749 1068 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 CD38P28907 300 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 EPHA3P29320 983 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 ALDH1B1P30837 517 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 HOXA13P31271 388 aaPredicted RBP3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 PRKAR1BP31321 381 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 UQCRC1P31930 480 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 FOLR3P41439 243 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 CYP2J2P51589 502 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 CLCN2P51788 898 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 PGDP52209 483 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 CACNA2D1P54289 1103 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 NXPH1P58417 271 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 TNNC1P63316 161 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 SETQ01105 290 aaPredicted RBP3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 LRRC63Q05C16 580 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 NSUN2Q08J23 767 aaKnown RBP eCLIP3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 IFFO1Q0D2I5 559 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 COASYQ13057 564 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 MTAPQ13126 283 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 CTTNQ14247 550 aaKnown RBP3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 EZH2Q15910 746 aaKnown RBP3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 LY6KQ17RY6 165 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 TRIM71Q2Q1W2 868 aaKnown RBP3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 QRICH1Q2TAL8 776 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 TRIM60Q495X7 471 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 PAPD7Q5XG87 772 aaKnown RBP3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 KCTD16Q68DU8 428 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 CENPPQ6IPU0 288 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 CDC42EP5Q6NZY7 148 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 C8orf74Q6P047 294 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 TRAPPC11Q7Z392 1133 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 GUF1Q8N442 669 aaKnown RBP3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 FAM133AQ8N9E0 248 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 MSANTD4Q8NCY6 345 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 MBD3L2Q8NHZ7 208 aaPredicted RBP3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 TRAPPC12Q8WVT3 735 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 UBLCP1Q8WVY7 318 aaPredicted RBP3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 TBC1D20Q96BZ9 403 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 FBXL20Q96IG2 436 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 C17orf80Q9BSJ5 609 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 DDX23Q9BUQ8 820 aaKnown RBP3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 SPZ1Q9BXG8 430 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 CAPS2Q9BXY5 557 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 COA1Q9GZY4 146 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 FAM107BQ9H098 131 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 NT5C3AQ9H0P0 336 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 TSPYL1Q9H0U9 437 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 MYLK2Q9H1R3 596 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 DPH5Q9H2P9 285 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 TP63Q9H3D4 680 aaPredicted RBP3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 GLOD4Q9HC38 313 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 PRDM8Q9NQV8 689 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 ITM2CQ9NQX7 267 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 TMOD2Q9NZR1 351 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 ARMCX3Q9UH62 379 aaPredicted RBP3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 SWAP70Q9UH65 585 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 PGAP2Q9UHJ9 254 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 RAB21Q9UL25 225 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 NFU1Q9UMS0 254 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 GABRQQ9UN88 632 aa3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 PACSIN2Q9UNF0 486 aaPredicted RBP3.28□□□□□ -1.88
CDC42SE2-205ENST00000502840 LAMA4Q16363 1823 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms