RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 DAPK1P53355 1430 aa6.59□□□□□ -1.35
NEDD4-203ENST00000502612 PRG4Q92954 1404 aaPredicted RBP6.59□□□□□ -1.35
NEDD4-203ENST00000502612 ZMYM2Q9UBW7 1377 aa6.59□□□□□ -1.35
NEDD4-203ENST00000502612 GCC2Q8IWJ2 1684 aa6.59□□□□□ -1.35
NEDD4-203ENST00000502612 KIF14Q15058 1648 aa6.59□□□□□ -1.35
NEDD4-203ENST00000502612 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.59□□□□□ -1.35
NEDD4-203ENST00000502612 HSPB6O14558 160 aa6.59□□□□□ -1.35
NEDD4-203ENST00000502612 TTKP33981 857 aa6.59□□□□□ -1.35
NEDD4-203ENST00000502612 RFC1P35251 1148 aaPredicted RBP6.59□□□□□ -1.35
NEDD4-203ENST00000502612 CASP2P42575 452 aa6.59□□□□□ -1.35
NEDD4-203ENST00000502612 YWHAZP63104 245 aaKnown RBP6.59□□□□□ -1.35
NEDD4-203ENST00000502612 INPP5JQ15735 1006 aaPredicted RBP6.59□□□□□ -1.35
NEDD4-203ENST00000502612 EZH2Q15910 746 aaKnown RBP6.59□□□□□ -1.35
NEDD4-203ENST00000502612 ODF3L2Q3SX64 289 aa6.59□□□□□ -1.35
NEDD4-203ENST00000502612 C10orf25Q5T742 122 aa6.59□□□□□ -1.35
NEDD4-203ENST00000502612 SHC4Q6S5L8 630 aa6.59□□□□□ -1.35
NEDD4-203ENST00000502612 PCGF5Q86SE9 256 aa6.59□□□□□ -1.35
NEDD4-203ENST00000502612 PIP4P1Q86T03 277 aa6.59□□□□□ -1.35
NEDD4-203ENST00000502612 TDRPQ86YL5 185 aa6.59□□□□□ -1.35
NEDD4-203ENST00000502612 DHX40Q8IX18 779 aaKnown RBP6.59□□□□□ -1.35
NEDD4-203ENST00000502612 SRRM1Q8IYB3 904 aaKnown RBP6.59□□□□□ -1.35
NEDD4-203ENST00000502612 NGEFQ8N5V2 710 aa6.59□□□□□ -1.35
NEDD4-203ENST00000502612 CEP76Q8TAP6 659 aa6.59□□□□□ -1.35
NEDD4-203ENST00000502612 ETNPPLQ8TBG4 499 aa6.59□□□□□ -1.35
NEDD4-203ENST00000502612 COQ8BQ96D53 544 aa6.59□□□□□ -1.35
NEDD4-203ENST00000502612 PABPC5Q96DU9 382 aaKnown RBP6.59□□□□□ -1.35
NEDD4-203ENST00000502612 SPRTNQ9H040 489 aaPredicted RBP6.59□□□□□ -1.35
NEDD4-203ENST00000502612 SCPEP1Q9HB40 452 aa6.59□□□□□ -1.35
NEDD4-203ENST00000502612 NRIP3Q9NQ35 241 aa6.59□□□□□ -1.35
NEDD4-203ENST00000502612 RNF146Q9NTX7 359 aa6.59□□□□□ -1.35
NEDD4-203ENST00000502612 SEL1LQ9UBV2 794 aa6.59□□□□□ -1.35
NEDD4-203ENST00000502612 PCDHA12Q9UN75 941 aa6.59□□□□□ -1.35
NEDD4-203ENST00000502612 ABCA8O94911 1581 aa6.59□□□□□ -1.35
NEDD4-203ENST00000502612 PLB1Q6P1J6 1458 aa6.59□□□□□ -1.36
NEDD4-203ENST00000502612 FSD2A1L4K1 749 aa6.58□□□□□ -1.36
NEDD4-203ENST00000502612 HSPB2A8KAH6 182 aa6.58□□□□□ -1.36
NEDD4-203ENST00000502612 LIASO43766 372 aa6.58□□□□□ -1.36
NEDD4-203ENST00000502612 DOK2O60496 412 aa6.58□□□□□ -1.36
NEDD4-203ENST00000502612 PTP4A3O75365 173 aa6.58□□□□□ -1.36
NEDD4-203ENST00000502612 MLYCDO95822 493 aa6.58□□□□□ -1.36
NEDD4-203ENST00000502612 HSPA1AP0DMV8 641 aaKnown RBP6.58□□□□□ -1.36
NEDD4-203ENST00000502612 HSPA1BP0DMV9 641 aaKnown RBP6.58□□□□□ -1.36
NEDD4-203ENST00000502612 CD38P28907 300 aa6.58□□□□□ -1.36
NEDD4-203ENST00000502612 RYKP34925 604 aa6.58□□□□□ -1.36
NEDD4-203ENST00000502612 CPOXP36551 454 aa6.58□□□□□ -1.36
NEDD4-203ENST00000502612 PPP3CCP48454 512 aa6.58□□□□□ -1.36
NEDD4-203ENST00000502612 CENPAP49450 140 aa6.58□□□□□ -1.36
NEDD4-203ENST00000502612 CXCR3P49682 368 aa6.58□□□□□ -1.36
NEDD4-203ENST00000502612 EIF3BP55884 814 aaKnown RBP6.58□□□□□ -1.36
NEDD4-203ENST00000502612 GRIK3Q13003 919 aa6.58□□□□□ -1.36
NEDD4-203ENST00000502612 KLF9Q13886 244 aaPredicted RBP6.58□□□□□ -1.36
NEDD4-203ENST00000502612 VEPH1Q14D04 833 aa6.58□□□□□ -1.36
NEDD4-203ENST00000502612 RNPS1Q15287 305 aaKnown RBP6.58□□□□□ -1.36
NEDD4-203ENST00000502612 MED22Q15528 200 aa6.58□□□□□ -1.36
NEDD4-203ENST00000502612 HSPB2Q16082 182 aa6.58□□□□□ -1.36
NEDD4-203ENST00000502612 TXNDC8Q6A555 127 aa6.58□□□□□ -1.36
NEDD4-203ENST00000502612 MZT2BQ6NZ67 158 aa6.58□□□□□ -1.36
NEDD4-203ENST00000502612 CDC73Q6P1J9 531 aa6.58□□□□□ -1.36
NEDD4-203ENST00000502612 FAM83HQ6ZRV2 1179 aaPredicted RBP6.58□□□□□ -1.36
NEDD4-203ENST00000502612 FAM185AQ8N0U4 392 aa6.58□□□□□ -1.36
NEDD4-203ENST00000502612 CREB3L4Q8TEY5 395 aa6.58□□□□□ -1.36
NEDD4-203ENST00000502612 YME1L1Q96TA2 773 aa6.58□□□□□ -1.36
NEDD4-203ENST00000502612 POLDIP3Q9BY77 421 aaKnown RBP6.58□□□□□ -1.36
NEDD4-203ENST00000502612 MVB12BQ9H7P6 319 aa6.58□□□□□ -1.36
NEDD4-203ENST00000502612 INTS6Q9UL03 887 aaKnown RBP6.58□□□□□ -1.36
NEDD4-203ENST00000502612 DNMT1P26358 1616 aaKnown RBP6.58□□□□□ -1.36
NEDD4-203ENST00000502612 ANKRD30AQ9BXX3 1397 aa6.57□□□□□ -1.36
NEDD4-203ENST00000502612 NPIPB11E5RHQ5 1161 aa6.57□□□□□ -1.36
NEDD4-203ENST00000502612 ATP2C2O75185 946 aa6.57□□□□□ -1.36
NEDD4-203ENST00000502612 GFPT2O94808 682 aa6.57□□□□□ -1.36
NEDD4-203ENST00000502612 TSPY4P0CV99 314 aa6.57□□□□□ -1.36
NEDD4-203ENST00000502612 TSPY10P0CW01 314 aa6.57□□□□□ -1.36
NEDD4-203ENST00000502612 SSBP2P81877 361 aaPredicted RBP6.57□□□□□ -1.36
NEDD4-203ENST00000502612 CEBPZQ03701 1054 aaKnown RBP6.57□□□□□ -1.36
NEDD4-203ENST00000502612 CAPSQ13938 189 aa6.57□□□□□ -1.36
NEDD4-203ENST00000502612 RUNX2Q13950 521 aa6.57□□□□□ -1.36
NEDD4-203ENST00000502612 RBMS2Q15434 407 aaKnown RBP6.57□□□□□ -1.36
NEDD4-203ENST00000502612 ALG11Q2TAA5 492 aa6.57□□□□□ -1.36
NEDD4-203ENST00000502612 ITPRIPL1Q6GPH6 555 aa6.57□□□□□ -1.36
NEDD4-203ENST00000502612 SYCE2Q6PIF2 218 aa6.57□□□□□ -1.36
NEDD4-203ENST00000502612 NOXA1Q86UR1 476 aa6.57□□□□□ -1.36
NEDD4-203ENST00000502612 ZNF548Q8NEK5 533 aaPredicted RBP6.57□□□□□ -1.36
NEDD4-203ENST00000502612 TMEM174Q8WUU8 243 aa6.57□□□□□ -1.36
NEDD4-203ENST00000502612 INTS12Q96CB8 462 aaKnown RBP6.57□□□□□ -1.36
NEDD4-203ENST00000502612 WDFY2Q96P53 400 aa6.57□□□□□ -1.36
NEDD4-203ENST00000502612 BBS4Q96RK4 519 aa6.57□□□□□ -1.36
NEDD4-203ENST00000502612 TMX4Q9H1E5 349 aaPredicted RBP6.57□□□□□ -1.36
NEDD4-203ENST00000502612 TERF2IPQ9NYB0 399 aa6.57□□□□□ -1.36
NEDD4-203ENST00000502612 A4GNTQ9UNA3 340 aa6.57□□□□□ -1.36
NEDD4-203ENST00000502612 SCINQ9Y6U3 715 aa6.57□□□□□ -1.36
NEDD4-203ENST00000502612 PTPRKQ15262 1439 aa6.57□□□□□ -1.36
NEDD4-203ENST00000502612 GPATCH8Q9UKJ3 1502 aaKnown RBP6.56□□□□□ -1.36
NEDD4-203ENST00000502612 ATP10BO94823 1461 aa6.56□□□□□ -1.36
NEDD4-203ENST00000502612 CAMSAP2Q08AD1 1489 aa6.56□□□□□ -1.36
NEDD4-203ENST00000502612 SHANK2Q9UPX8 1470 aa6.56□□□□□ -1.36
NEDD4-203ENST00000502612 A0A096LPK6 155 aa6.56□□□□□ -1.36
NEDD4-203ENST00000502612 TMEM272A0A1B0GTI8 110 aa6.56□□□□□ -1.36
NEDD4-203ENST00000502612 C17orf102A2RUQ5 167 aa6.56□□□□□ -1.36
NEDD4-203ENST00000502612 STMND1H3BQB6 276 aa6.56□□□□□ -1.36
NEDD4-203ENST00000502612 EBAG9O00559 213 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms