RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	SORCS1	Q8WY21	1168 aa		12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	EZH1	Q92800	747 aa	Predicted RBP	12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	LRRC39	Q96DD0	335 aa		12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	FEM1C	Q96JP0	617 aa		12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	EXOC2	Q96KP1	924 aa		12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	GDAP1L1	Q96MZ0	367 aa		12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	TBL1Y	Q9BQ87	522 aa		12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	CDC42EP4	Q9H3Q1	356 aa	Known RBP	12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	PLAC1	Q9HBJ0	212 aa		12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	FBRSL1	Q9HCM7	1045 aa	Known RBP	12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	ZNF446	Q9NWS9	450 aa		12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	TEX264	Q9Y6I9	313 aa		12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	WASH3P	C4AMC7	463 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	FZD6	O60353	706 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	USP12	O75317	370 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	AVIL	O75366	819 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	PMPCB	O75439	489 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	KAT7	O95251	611 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	AGT	P01019	485 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	PRL	P01236	227 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	ATP5B	P06576	529 aa	Known RBP	12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	ASGR2	P07307	311 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	CTH	P32929	405 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	GRIA2	P42262	883 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	MAGEA4	P43358	317 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	LMAN1	P49257	510 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	SCNN1B	P51168	640 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	SARNP	P82979	210 aa	Known RBP	12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	ITK	Q08881	620 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	TRAF2	Q12933	501 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	PDIA2	Q13087	525 aa	Known RBP	12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	DLG2	Q15700	870 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	TXNDC11	Q6PKC3	985 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	TRMT10C	Q7L0Y3	403 aa	Known RBP	12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	LINC00523	Q86TU6	105 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	RNF135	Q8IUD6	432 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	IGDCC3	Q8IVU1	814 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	12.28	□□□□□ -0.44	4e-16	■■□□□ 14.4
MATR3-231	ENST00000502394	IPMK	Q8NFU5	416 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	CSGALNACT1	Q8TDX6	532 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	FICD	Q9BVA6	458 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	TDRD1	Q9BXT4	1180 aa	Known RBP	12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	FUT8	Q9BYC5	575 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	TM6SF2	Q9BZW4	377 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	SEMA4A	Q9H3S1	761 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	C8orf33	Q9H7E9	229 aa	Predicted RBP	12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	SAYSD1	Q9NPB0	183 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	SLC2A4RG	Q9NR83	387 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	NINJ2	Q9NZG7	142 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	FAM50B	Q9Y247	325 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	STARD13	Q9Y3M8	1113 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	MIA3	Q5JRA6	1907 aa		12.28	□□□□□ -0.44
MATR3-231	ENST00000502394	SPECC1L-ADORA2A	F8WAN1	911 aa		12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	TRAFD1	O14545	582 aa	Predicted RBP	12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	MAP2K7	O14733	419 aa		12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	HTRA2	O43464	458 aa	Predicted RBP	12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	IGSF6	O95976	241 aa		12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	HSD17B3	P37058	310 aa		12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	CHRNA4	P43681	627 aa		12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	MAPK8	P45983	427 aa		12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	GALK1	P51570	392 aa		12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	PMS2	P54278	862 aa		12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	SNRPD1	P62314	119 aa	Known RBP	12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	CDK18	Q07002	472 aa		12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	CDH17	Q12864	832 aa		12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	ENPP2	Q13822	863 aa		12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	CASP8	Q14790	479 aa		12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	SLC1A5	Q15758	541 aa		12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	BBS9	Q3SYG4	887 aa		12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	PREPL	Q4J6C6	727 aa	Predicted RBP	12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	CCDC38	Q502W7	563 aa		12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	CARD16	Q5EG05	197 aa		12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	DNAJC21	Q5F1R6	531 aa	Known RBP	12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	CCDC25	Q86WR0	208 aa		12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	RALGPS2	Q86X27	583 aa	Predicted RBP	12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	MPP5	Q8N3R9	675 aa		12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	OR2A12	Q8NGT7	310 aa		12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	APOL2	Q9BQE5	337 aa		12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	CPEB1	Q9BZB8	566 aa	Known RBP	12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	CIPC	Q9C0C6	399 aa		12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	TNKS2	Q9H2K2	1166 aa		12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	TMEM245	Q9H330	911 aa		12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	PABPC3	Q9H361	631 aa	Known RBP	12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	THAP10	Q9P2Z0	257 aa	Predicted RBP	12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	EVL	Q9UI08	416 aa	Predicted RBP	12.27	□□□□□ -0.45
MATR3-231	ENST00000502394	PRUNE2	Q8WUY3	3088 aa		12.26	□□□□□ -0.45
MATR3-231	ENST00000502394	F5	P12259	2224 aa		12.26	□□□□□ -0.45
MATR3-231	ENST00000502394	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	12.26	□□□□□ -0.45
MATR3-231	ENST00000502394	ANTXRL	A6NF34	631 aa		12.26	□□□□□ -0.45
MATR3-231	ENST00000502394	TTC34	A8MYJ7	566 aa		12.26	□□□□□ -0.45
MATR3-231	ENST00000502394	AP3B1	O00203	1094 aa		12.26	□□□□□ -0.45
MATR3-231	ENST00000502394	RIPK2	O43353	540 aa		12.26	□□□□□ -0.45
MATR3-231	ENST00000502394	NARS	O43776	548 aa	Known RBP	12.26	□□□□□ -0.45
MATR3-231	ENST00000502394	SOCS5	O75159	536 aa		12.26	□□□□□ -0.45
MATR3-231	ENST00000502394	SASH3	O75995	380 aa		12.26	□□□□□ -0.45
MATR3-231	ENST00000502394	TTC4	O95801	387 aa		12.26	□□□□□ -0.45
MATR3-231	ENST00000502394	NDST3	O95803	873 aa		12.26	□□□□□ -0.45
MATR3-231	ENST00000502394	APOD	P05090	189 aa		12.26	□□□□□ -0.45
MATR3-231	ENST00000502394	ABHD2	P08910	425 aa		12.26	□□□□□ -0.45
MATR3-231	ENST00000502394	SRF	P11831	508 aa		12.26	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms