RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 TRIM49P0CI25 452 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 TRIM49CP0CI26 452 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 PNLIPP16233 465 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 TYRP1P17643 537 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 POLR2EP19388 210 aaKnown RBP4.78□□□□□ -1.64
CSTF1-207ENST00000498689 CORO1AP31146 461 aaKnown RBP4.78□□□□□ -1.64
CSTF1-207ENST00000498689 GATA4P43694 442 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 MYBPHQ13203 477 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 ARHGEF7Q14155 803 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 MAP7Q14244 749 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 HLTFQ14527 1009 aaKnown RBP eCLIP4.78□□□□□ -1.64
CSTF1-207ENST00000498689 SYCP1Q15431 976 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 C3AR1Q16581 482 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 HIF1AQ16665 826 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 KYNUQ16719 465 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 PFKFB3Q16875 520 aaPredicted RBP4.78□□□□□ -1.64
CSTF1-207ENST00000498689 Q5PR19 223 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 SNAP47Q5SQN1 464 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 ZNF324BQ6AW86 544 aaPredicted RBP4.78□□□□□ -1.64
CSTF1-207ENST00000498689 MTFR2Q6P444 385 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 FAM199XQ6PEV8 388 aaPredicted RBP4.78□□□□□ -1.64
CSTF1-207ENST00000498689 GFRALQ6UXV0 394 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 C4orf50Q6ZRC1 276 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 CAMKMTQ7Z624 323 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 CDC20BQ86Y33 519 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 HIPK1Q86Z02 1210 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 DENND1CQ8IV53 801 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 ZNF713Q8N859 430 aaPredicted RBP4.78□□□□□ -1.64
CSTF1-207ENST00000498689 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.78□□□□□ -1.64
CSTF1-207ENST00000498689 DNAAF3Q8N9W5 541 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 KDM1BQ8NB78 822 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 PDZD8Q8NEN9 1154 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 ADAMTS17Q8TE56 1095 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 WFIKKN2Q8TEU8 576 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 THAP4Q8WY91 577 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 OVCA2Q8WZ82 227 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 TSACCQ96A04 125 aaPredicted RBP4.78□□□□□ -1.64
CSTF1-207ENST00000498689 AZIN2Q96A70 460 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 TMEM125Q96AQ2 219 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 RPL10LQ96L21 214 aaKnown RBP4.78□□□□□ -1.64
CSTF1-207ENST00000498689 CEP295NLQ96MC4 621 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 KLF6Q99612 283 aaPredicted RBP4.78□□□□□ -1.64
CSTF1-207ENST00000498689 SYT15Q9BQS2 421 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 KRTAP9-2Q9BYQ4 174 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 SLC13A1Q9BZW2 595 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 ZCCHC2Q9C0B9 1178 aaKnown RBP4.78□□□□□ -1.64
CSTF1-207ENST00000498689 ZNF518BQ9C0D4 1074 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 ZDHHC6Q9H6R6 413 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 LRTM1Q9HBL6 345 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 ETNK1Q9HBU6 452 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 KMT5AQ9NQR1 393 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 DPP3Q9NY33 737 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 EHD2Q9NZN4 543 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 C5AR2Q9P296 337 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 AGO1Q9UL18 857 aaKnown RBP4.78□□□□□ -1.64
CSTF1-207ENST00000498689 HRH3Q9Y5N1 445 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 DNAJC13O75165 2243 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 DNAH1Q9P2D7 4330 aa4.78□□□□□ -1.64
CSTF1-207ENST00000498689 EDDM13A0A1B0GTR0 161 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 SSU72P8A0A1W2PR75 194 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 CCDC78A2IDD5 438 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 CCDC169A6NNP5 214 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 PP2D1A8MPX8 630 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 B4DGG1 531 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 XPOTO43592 962 aaKnown RBP4.77□□□□□ -1.65
CSTF1-207ENST00000498689 UNC5CO95185 931 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 RECKO95980 971 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 RAF1P04049 648 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 ATP5BP06576 529 aaKnown RBP4.77□□□□□ -1.65
CSTF1-207ENST00000498689 CD33P20138 364 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 CHKAP35790 457 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 ATP5C1P36542 298 aaKnown RBP4.77□□□□□ -1.65
CSTF1-207ENST00000498689 GNL1P36915 607 aaPredicted RBP4.77□□□□□ -1.65
CSTF1-207ENST00000498689 CSKP41240 450 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 MATR3P43243 847 aaKnown RBP eCLIP4.77□□□□□ -1.65
CSTF1-207ENST00000498689 NPTX2P47972 431 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 STK19P49842 368 aaPredicted RBP4.77□□□□□ -1.65
CSTF1-207ENST00000498689 SMSP52788 366 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 MFAP1P55081 439 aaKnown RBP4.77□□□□□ -1.65
CSTF1-207ENST00000498689 MAZP56270 477 aaKnown RBP4.77□□□□□ -1.65
CSTF1-207ENST00000498689 PEX3P56589 373 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 TFF3Q07654 80 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 MCL1Q07820 350 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 TRA2AQ13595 282 aaKnown RBP eCLIP4.77□□□□□ -1.65
CSTF1-207ENST00000498689 TMEM132DQ14C87 1099 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 SV2CQ496J9 727 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 MDH1BQ5I0G3 518 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 FIGNL1Q6PIW4 674 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 TMEM207Q6UWW9 146 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 IGFL3Q6UXB1 125 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 MMS22LQ6ZRQ5 1243 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 RALYLQ86SE5 291 aaKnown RBP4.77□□□□□ -1.65
CSTF1-207ENST00000498689 SKAP1Q86WV1 359 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 OR6C4Q8NGE1 309 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 OR4D9Q8NGE8 314 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 NCOA7Q8NI08 942 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 KBTBD7Q8WVZ9 684 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 LMLNQ96KR4 655 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 LYSTQ99698 3801 aa4.77□□□□□ -1.65
CSTF1-207ENST00000498689 DCLK3Q9C098 648 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms