RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 AREL1O15033 823 aa16.7■□□□□ 0.26
VIM-208ENST00000497849 PMM2O15305 246 aa16.7■□□□□ 0.26
VIM-208ENST00000497849 GLI1P08151 1106 aa16.7■□□□□ 0.26
VIM-208ENST00000497849 SYKP43405 635 aa16.7■□□□□ 0.26
VIM-208ENST00000497849 BLKP51451 505 aa16.7■□□□□ 0.26
VIM-208ENST00000497849 NDUFA8P51970 172 aa16.7■□□□□ 0.26
VIM-208ENST00000497849 FKBP3Q00688 224 aaKnown RBP16.7■□□□□ 0.26
VIM-208ENST00000497849 GCNT1Q02742 428 aa16.7■□□□□ 0.26
VIM-208ENST00000497849 ANKRD40Q6AI12 368 aa16.7■□□□□ 0.26
VIM-208ENST00000497849 RETSATQ6NUM9 610 aa16.7■□□□□ 0.26
VIM-208ENST00000497849 CLEC17AQ6ZS10 378 aa16.7■□□□□ 0.26
VIM-208ENST00000497849 HID1Q8IV36 788 aa16.7■□□□□ 0.26
VIM-208ENST00000497849 ZNF606Q8WXB4 792 aa16.7■□□□□ 0.26
VIM-208ENST00000497849 SEMA6CQ9H3T2 930 aa16.7■□□□□ 0.26
VIM-208ENST00000497849 ACP6Q9NPH0 428 aa16.7■□□□□ 0.26
VIM-208ENST00000497849 ZNF71Q9NQZ8 489 aaPredicted RBP16.7■□□□□ 0.26
VIM-208ENST00000497849 IGSF5Q9NSI5 407 aa16.7■□□□□ 0.26
VIM-208ENST00000497849 ASNSD1Q9NWL6 643 aa16.7■□□□□ 0.26
VIM-208ENST00000497849 HECAQ9UBI9 543 aaPredicted RBP16.7■□□□□ 0.26
VIM-208ENST00000497849 ZNF212Q9UDV6 495 aa16.7■□□□□ 0.26
VIM-208ENST00000497849 CACNA1DQ01668 2161 aa16.7■□□□□ 0.26
VIM-208ENST00000497849 FAM237AA0A1B0GTK4 181 aa16.69■□□□□ 0.26
VIM-208ENST00000497849 STMND1H3BQB6 276 aa16.69■□□□□ 0.26
VIM-208ENST00000497849 TOR1BO14657 336 aa16.69■□□□□ 0.26
VIM-208ENST00000497849 MMP20O60882 483 aa16.69■□□□□ 0.26
VIM-208ENST00000497849 HSF2BPO75031 334 aa16.69■□□□□ 0.26
VIM-208ENST00000497849 CCL4P13236 92 aa16.69■□□□□ 0.26
VIM-208ENST00000497849 CTSEP14091 401 aa16.69■□□□□ 0.26
VIM-208ENST00000497849 PRCPP42785 496 aa16.69■□□□□ 0.26
VIM-208ENST00000497849 CCR10P46092 362 aa16.69■□□□□ 0.26
VIM-208ENST00000497849 ZNF805Q5CZA5 627 aa16.69■□□□□ 0.26
VIM-208ENST00000497849 KRBA2Q6ZNG9 492 aa16.69■□□□□ 0.26
VIM-208ENST00000497849 SPRED1Q7Z699 444 aa16.69■□□□□ 0.26
VIM-208ENST00000497849 GKN2Q86XP6 184 aa16.69■□□□□ 0.26
VIM-208ENST00000497849 SFTPA2Q8IWL1 248 aa16.69■□□□□ 0.26
VIM-208ENST00000497849 WDTC1Q8N5D0 677 aa16.69■□□□□ 0.26
VIM-208ENST00000497849 OR6K2Q8NGY2 324 aa16.69■□□□□ 0.26
VIM-208ENST00000497849 PMEPA1Q969W9 287 aa16.69■□□□□ 0.26
VIM-208ENST00000497849 MIB2Q96AX9 1013 aa16.69■□□□□ 0.26
VIM-208ENST00000497849 CPXM1Q96SM3 734 aa16.69■□□□□ 0.26
VIM-208ENST00000497849 EPAS1Q99814 870 aa16.69■□□□□ 0.26
VIM-208ENST00000497849 SPON2Q9BUD6 331 aa16.69■□□□□ 0.26
VIM-208ENST00000497849 TM6SF2Q9BZW4 377 aa16.69■□□□□ 0.26
VIM-208ENST00000497849 TKTL2Q9H0I9 626 aa16.69■□□□□ 0.26
VIM-208ENST00000497849 PIGVQ9NUD9 493 aa16.69■□□□□ 0.26
VIM-208ENST00000497849 ARHGEF38Q9NXL2 777 aa16.69■□□□□ 0.26
VIM-208ENST00000497849 KCNK4Q9NYG8 393 aa16.69■□□□□ 0.26
VIM-208ENST00000497849 ARHGEF17Q96PE2 2063 aaPredicted RBP16.68■□□□□ 0.26
VIM-208ENST00000497849 CENPEQ02224 2701 aa16.68■□□□□ 0.26
VIM-208ENST00000497849 LETM1O95202 739 aaPredicted RBP16.68■□□□□ 0.26
VIM-208ENST00000497849 LIFP15018 202 aa16.68■□□□□ 0.26
VIM-208ENST00000497849 GLB1P16278 677 aa16.68■□□□□ 0.26
VIM-208ENST00000497849 OR1E1P30953 314 aa16.68■□□□□ 0.26
VIM-208ENST00000497849 SLC20A2Q08357 652 aa16.68■□□□□ 0.26
VIM-208ENST00000497849 LRRC73Q5JTD7 316 aa16.68■□□□□ 0.26
VIM-208ENST00000497849 EFHC1Q5JVL4 640 aa16.68■□□□□ 0.26
VIM-208ENST00000497849 CERCAMQ5T4B2 595 aa16.68■□□□□ 0.26
VIM-208ENST00000497849 PHF19Q5T6S3 580 aa16.68■□□□□ 0.26
VIM-208ENST00000497849 TMEM164Q5U3C3 297 aa16.68■□□□□ 0.26
VIM-208ENST00000497849 KCTD16Q68DU8 428 aa16.68■□□□□ 0.26
VIM-208ENST00000497849 RD3Q7Z3Z2 195 aa16.68■□□□□ 0.26
VIM-208ENST00000497849 GBP4Q96PP9 640 aa16.68■□□□□ 0.26
VIM-208ENST00000497849 ATP13A1Q9HD20 1204 aa16.68■□□□□ 0.26
VIM-208ENST00000497849 TMPRSS4Q9NRS4 437 aa16.68■□□□□ 0.26
VIM-208ENST00000497849 ANKRD17O75179 2603 aaKnown RBP16.68■□□□□ 0.26
VIM-208ENST00000497849 IGLV3-10A0A075B6K4 115 aa16.67■□□□□ 0.26
VIM-208ENST00000497849 ILVBLA1L0T0 632 aa16.67■□□□□ 0.26
VIM-208ENST00000497849 TRIM49BA6NDI0 452 aa16.67■□□□□ 0.26
VIM-208ENST00000497849 ENO4A6NNW6 628 aa16.67■□□□□ 0.26
VIM-208ENST00000497849 TM7SF2O76062 418 aa16.67■□□□□ 0.26
VIM-208ENST00000497849 RASGRP1O95267 797 aa16.67■□□□□ 0.26
VIM-208ENST00000497849 KRT5P13647 590 aa16.67■□□□□ 0.26
VIM-208ENST00000497849 PNLIPP16233 465 aa16.67■□□□□ 0.26
VIM-208ENST00000497849 TFE3P19532 575 aaPredicted RBP16.67■□□□□ 0.26
VIM-208ENST00000497849 ITIH2P19823 946 aa16.67■□□□□ 0.26
VIM-208ENST00000497849 CD97P48960 835 aa16.67■□□□□ 0.26
VIM-208ENST00000497849 CXCR3P49682 368 aa16.67■□□□□ 0.26
VIM-208ENST00000497849 PEX5P50542 639 aa16.67■□□□□ 0.26
VIM-208ENST00000497849 ATP1A2P50993 1020 aa16.67■□□□□ 0.26
VIM-208ENST00000497849 IRF4Q15306 451 aa16.67■□□□□ 0.26
VIM-208ENST00000497849 KLHL40Q2TBA0 621 aa16.67■□□□□ 0.26
VIM-208ENST00000497849 OGFOD3Q6PK18 319 aa16.67■□□□□ 0.26
VIM-208ENST00000497849 FAM183BPQ6ZVS7 135 aa16.67■□□□□ 0.26
VIM-208ENST00000497849 PLPP6Q8IY26 295 aa16.67■□□□□ 0.26
VIM-208ENST00000497849 C9orf43Q8TAL5 461 aaPredicted RBP16.67■□□□□ 0.26
VIM-208ENST00000497849 ARHGEF26Q96DR7 871 aa16.67■□□□□ 0.26
VIM-208ENST00000497849 WDCPQ9H6R7 721 aa16.67■□□□□ 0.26
VIM-208ENST00000497849 LMBRD1Q9NUN5 540 aa16.67■□□□□ 0.26
VIM-208ENST00000497849 PLEKHB1Q9UF11 243 aaPredicted RBP16.67■□□□□ 0.26
VIM-208ENST00000497849 MED7O43513 233 aa16.66■□□□□ 0.26
VIM-208ENST00000497849 DAB1O75553 588 aa16.66■□□□□ 0.26
VIM-208ENST00000497849 UGT2B4P06133 528 aa16.66■□□□□ 0.26
VIM-208ENST00000497849 UGT1A3P35503 534 aa16.66■□□□□ 0.26
VIM-208ENST00000497849 SRP54P61011 504 aaKnown RBP16.66■□□□□ 0.26
VIM-208ENST00000497849 EFHC2Q5JST6 749 aa16.66■□□□□ 0.26
VIM-208ENST00000497849 ENPP7Q6UWV6 458 aa16.66■□□□□ 0.26
VIM-208ENST00000497849 OLFML1Q6UWY5 402 aa16.66■□□□□ 0.26
VIM-208ENST00000497849 ZNF783Q6ZMS7 281 aa16.66■□□□□ 0.26
VIM-208ENST00000497849 RYBPQ8N488 228 aaPredicted RBP16.66■□□□□ 0.26
VIM-208ENST00000497849 EHBP1Q8NDI1 1231 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms