RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 DHRS13Q6UX07 377 aa12.53□□□□□ -0.4
CLDN12-213ENST00000496677 TTC7BQ86TV6 843 aa12.53□□□□□ -0.4
CLDN12-213ENST00000496677 GALNT15Q8N3T1 639 aa12.53□□□□□ -0.4
CLDN12-213ENST00000496677 NPWQ8N729 165 aa12.53□□□□□ -0.4
CLDN12-213ENST00000496677 HCAR2Q8TDS4 363 aa12.53□□□□□ -0.4
CLDN12-213ENST00000496677 TRIM11Q96F44 468 aa12.53□□□□□ -0.4
CLDN12-213ENST00000496677 CELF6Q96J87 481 aaKnown RBP12.53□□□□□ -0.4
CLDN12-213ENST00000496677 MRPL47Q9HD33 250 aaKnown RBP12.53□□□□□ -0.4
CLDN12-213ENST00000496677 DONSONQ9NYP3 566 aa12.53□□□□□ -0.4
CLDN12-213ENST00000496677 UBA2Q9UBT2 640 aaPredicted RBP12.53□□□□□ -0.4
CLDN12-213ENST00000496677 SCINQ9Y6U3 715 aa12.53□□□□□ -0.4
CLDN12-213ENST00000496677 DSPP15924 2871 aaKnown RBP12.53□□□□□ -0.4
CLDN12-213ENST00000496677 GOLGA4Q13439 2230 aaKnown RBP12.53□□□□□ -0.4
CLDN12-213ENST00000496677 ANKRD11Q6UB99 2663 aaPredicted RBP12.53□□□□□ -0.4
CLDN12-213ENST00000496677 A0A087X0T9 212 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 SPTY2D1-AS1A0A0U1RR47 76 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 A6NNZ2 444 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 PRPSAP2O60256 369 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 PIAS2O75928 621 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 GYPCP04921 128 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 SERPING1P05155 500 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 CYP1A2P05177 515 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 FAM228BP0C875 321 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 CKMT2P17540 419 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 DESP17661 470 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 ZNF135P52742 658 aaPredicted RBP12.52□□□□□ -0.41
CLDN12-213ENST00000496677 RAD51Q06609 339 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 SGCGQ13326 291 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 DPYSL2Q16555 572 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 TMEM52BQ4KMG9 183 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 TXNRD3NBQ6F5E7 133 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 KDM7AQ6ZMT4 941 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 TMPRSS12Q86WS5 348 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 ZNF354CQ86Y25 554 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 TP53INP2Q8IXH6 220 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 DENND6BQ8NEG7 585 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 OR4C6Q8NH72 309 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 NSMCE3Q96MG7 304 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 NCAPGQ9BPX3 1015 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 CALN1Q9BXU9 219 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 MYO1AQ9UBC5 1043 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 DKK4Q9UBT3 224 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 KLF15Q9UIH9 416 aa12.52□□□□□ -0.41
CLDN12-213ENST00000496677 FAM149AA5PLN7 773 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 TRABD2BA6NFA1 517 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 ARHGAP42A6NI28 874 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 SIGLEC6O43699 453 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 MMP20O60882 483 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 RFPL3O75679 317 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 PIGNO95427 931 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 CSF2P04141 144 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 CDK4P11802 303 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 ACP1P24666 158 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 HNRNPH3P31942 346 aaKnown RBP12.51□□□□□ -0.41
CLDN12-213ENST00000496677 RABIFP47224 123 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 SUOXP51687 545 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 NSUN2Q08J23 767 aaKnown RBP eCLIP12.51□□□□□ -0.41
CLDN12-213ENST00000496677 EIF2B5Q13144 721 aaKnown RBP12.51□□□□□ -0.41
CLDN12-213ENST00000496677 ILKQ13418 452 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 ZSCAN23Q3MJ62 389 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 BOLA3Q53S33 107 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 PPP6R3Q5H9R7 873 aaPredicted RBP12.51□□□□□ -0.41
CLDN12-213ENST00000496677 LRRC73Q5JTD7 316 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 ARHGAP36Q6ZRI8 547 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 POLNQ7Z5Q5 900 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 ZSWIM9Q86XI8 627 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 PROSER1Q86XN7 944 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 CACTIN-AS1Q8N1I8 211 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 NIPA2Q8N8Q9 360 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 TSEN2Q8NCE0 465 aaKnown RBP12.51□□□□□ -0.41
CLDN12-213ENST00000496677 CPLX3Q8WVH0 158 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 ARHGEF26Q96DR7 871 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 IQCDQ96DY2 449 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 EXOC2Q96KP1 924 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 ZNF641Q96N77 438 aaPredicted RBP12.51□□□□□ -0.41
CLDN12-213ENST00000496677 THAP2Q9H0W7 228 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 SUV39H2Q9H5I1 410 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 ETNK2Q9NVF9 386 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 IFNKQ9P0W0 207 aa12.51□□□□□ -0.41
CLDN12-213ENST00000496677 PNMA8BQ9ULN7 279 aaPredicted RBP12.51□□□□□ -0.41
CLDN12-213ENST00000496677 APC2O95996 2303 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 LY6G6EA0A0G2JKS1 128 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 NEMP1O14524 444 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 FPGTO14772 594 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 MUSKO15146 869 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 PEX11BO96011 259 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 RARAP10276 462 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 NME1P15531 152 aaKnown RBP12.5□□□□□ -0.41
CLDN12-213ENST00000496677 AMPD1P23109 780 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 IL4RP24394 825 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 IGFALSP35858 605 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 CLDN6P56747 220 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 TPM4P67936 248 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 SLC25A11Q02978 314 aaKnown RBP12.5□□□□□ -0.41
CLDN12-213ENST00000496677 IL10RBQ08334 325 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 PIGHQ14442 188 aaPredicted RBP12.5□□□□□ -0.41
CLDN12-213ENST00000496677 RFTN1Q14699 578 aaPredicted RBP12.5□□□□□ -0.41
CLDN12-213ENST00000496677 GRM3Q14832 879 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 AGERQ15109 404 aa12.5□□□□□ -0.41
CLDN12-213ENST00000496677 UGP2Q16851 508 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms