RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 PSMA2P25787 234 aa13.11□□□□□ -0.31
FN1-226ENST00000496542 IGFALSP35858 605 aa13.11□□□□□ -0.31
FN1-226ENST00000496542 ASIC2Q16515 512 aa13.11□□□□□ -0.31
FN1-226ENST00000496542 INO80DQ53TQ3 878 aaPredicted RBP13.11□□□□□ -0.31
FN1-226ENST00000496542 DNAAF5Q86Y56 855 aa13.11□□□□□ -0.31
FN1-226ENST00000496542 UMODL1-AS1Q8N2C9 162 aa13.11□□□□□ -0.31
FN1-226ENST00000496542 DCBLD1Q8N8Z6 715 aa13.11□□□□□ -0.31
FN1-226ENST00000496542 ASB12Q8WXK4 309 aa13.11□□□□□ -0.31
FN1-226ENST00000496542 CELF6Q96J87 481 aaKnown RBP13.11□□□□□ -0.31
FN1-226ENST00000496542 SYT11Q9BT88 431 aa13.11□□□□□ -0.31
FN1-226ENST00000496542 WRAP53Q9BUR4 548 aaKnown RBP13.11□□□□□ -0.31
FN1-226ENST00000496542 DUSP23Q9BVJ7 150 aa13.11□□□□□ -0.31
FN1-226ENST00000496542 NRSN2Q9GZP1 204 aa13.11□□□□□ -0.31
FN1-226ENST00000496542 TMEM63CQ9P1W3 806 aa13.11□□□□□ -0.31
FN1-226ENST00000496542 LHX3Q9UBR4 397 aa13.11□□□□□ -0.31
FN1-226ENST00000496542 KLF15Q9UIH9 416 aa13.11□□□□□ -0.31
FN1-226ENST00000496542 AP4E1Q9UPM8 1137 aa13.11□□□□□ -0.31
FN1-226ENST00000496542 ANKRD36A6QL64 1941 aa13.11□□□□□ -0.31
FN1-226ENST00000496542 A0A087WV48 116 aa13.1□□□□□ -0.31
FN1-226ENST00000496542 LY6G6EA0A0G2JKS1 128 aa13.1□□□□□ -0.31
FN1-226ENST00000496542 EEF2KO00418 725 aaKnown RBP13.1□□□□□ -0.31
FN1-226ENST00000496542 AQP9O43315 295 aa13.1□□□□□ -0.31
FN1-226ENST00000496542 TLX3O43711 291 aaPredicted RBP13.1□□□□□ -0.31
FN1-226ENST00000496542 OPA1O60313 960 aa13.1□□□□□ -0.31
FN1-226ENST00000496542 PIGNO95427 931 aa13.1□□□□□ -0.31
FN1-226ENST00000496542 TIMP2P16035 220 aa13.1□□□□□ -0.31
FN1-226ENST00000496542 ABCG1P45844 678 aa13.1□□□□□ -0.31
FN1-226ENST00000496542 THOP1P52888 689 aa13.1□□□□□ -0.31
FN1-226ENST00000496542 PFN3P60673 137 aa13.1□□□□□ -0.31
FN1-226ENST00000496542 EIF2B5Q13144 721 aaKnown RBP13.1□□□□□ -0.31
FN1-226ENST00000496542 MAMLD1Q13495 774 aa13.1□□□□□ -0.31
FN1-226ENST00000496542 RTP5Q14D33 572 aa13.1□□□□□ -0.31
FN1-226ENST00000496542 CYTH1Q15438 398 aa13.1□□□□□ -0.31
FN1-226ENST00000496542 DEFB133Q30KQ1 61 aa13.1□□□□□ -0.31
FN1-226ENST00000496542 PPP1R2P3Q6NXS1 205 aa13.1□□□□□ -0.31
FN1-226ENST00000496542 RBFAQ8N0V3 343 aa13.1□□□□□ -0.31
FN1-226ENST00000496542 LMX1AQ8TE12 382 aa13.1□□□□□ -0.31
FN1-226ENST00000496542 CRELD1Q96HD1 420 aa13.1□□□□□ -0.31
FN1-226ENST00000496542 C1QTNF7Q9BXJ2 289 aa13.1□□□□□ -0.31
FN1-226ENST00000496542 DHX35Q9H5Z1 703 aaKnown RBP13.1□□□□□ -0.31
FN1-226ENST00000496542 RTN4Q9NQC3 1192 aaKnown RBP13.1□□□□□ -0.31
FN1-226ENST00000496542 PARVAQ9NVD7 372 aa13.1□□□□□ -0.31
FN1-226ENST00000496542 EVA1BQ9NVM1 165 aa13.1□□□□□ -0.31
FN1-226ENST00000496542 DKK3Q9UBP4 350 aa13.1□□□□□ -0.31
FN1-226ENST00000496542 PCSK1NQ9UHG2 260 aa13.1□□□□□ -0.31
FN1-226ENST00000496542 MYO6Q9UM54 1294 aa13.1□□□□□ -0.31
FN1-226ENST00000496542 MFHAS1Q9Y4C4 1052 aa13.1□□□□□ -0.31
FN1-226ENST00000496542 U3KQA8 63 aa13.1□□□□□ -0.31
FN1-226ENST00000496542 SMG1Q96Q15 3661 aaKnown RBP13.1□□□□□ -0.31
FN1-226ENST00000496542 J3KR12 359 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 BRINP1O60477 761 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 ABCB7O75027 752 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 TM7SF2O76062 418 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 HTR7P34969 479 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 DUSP3P51452 185 aaPredicted RBP13.09□□□□□ -0.31
FN1-226ENST00000496542 COL9A2Q14055 689 aaPredicted RBP13.09□□□□□ -0.31
FN1-226ENST00000496542 PTK2BQ14289 1009 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 CDKN3Q16667 212 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 CA9Q16790 459 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 KLHL40Q2TBA0 621 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 FILIP1LQ4L180 1135 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 CFAP58Q5T655 872 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 E4F1Q66K89 784 aaPredicted RBP13.09□□□□□ -0.31
FN1-226ENST00000496542 PLEKHA7Q6IQ23 1121 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 ZCCHC8Q6NZY4 707 aaKnown RBP13.09□□□□□ -0.31
FN1-226ENST00000496542 CACTIN-AS1Q8N1I8 211 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 FAM181AQ8N9Y4 354 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 IFI44Q8TCB0 444 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 MAPK15Q8TD08 544 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 CENPTQ96BT3 561 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 VCPIP1Q96JH7 1222 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 PEBP4Q96S96 227 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 KCTD15Q96SI1 283 aaPredicted RBP13.09□□□□□ -0.31
FN1-226ENST00000496542 SNRNP25Q9BV90 132 aaKnown RBP13.09□□□□□ -0.31
FN1-226ENST00000496542 TRIM7Q9C029 511 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 ABCG4Q9H172 646 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 TCEAL2Q9H3H9 227 aaPredicted RBP13.09□□□□□ -0.31
FN1-226ENST00000496542 HAUS4Q9H6D7 363 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 LRRC19Q9H756 370 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 PDFQ9HBH1 243 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 USP29Q9HBJ7 922 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 MBNL1Q9NR56 388 aaKnown RBP13.09□□□□□ -0.31
FN1-226ENST00000496542 DONSONQ9NYP3 566 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 APOBEC3BQ9UH17 382 aaKnown RBP13.09□□□□□ -0.31
FN1-226ENST00000496542 COQ6Q9Y2Z9 468 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 PCDHB1Q9Y5F3 818 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 CSNK1G3Q9Y6M4 447 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 BPTFQ12830 3046 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 KIF26BQ2KJY2 2108 aa13.09□□□□□ -0.31
FN1-226ENST00000496542 CPED1A4D0V7 1026 aa13.08□□□□□ -0.32
FN1-226ENST00000496542 ARHGAP42A6NI28 874 aa13.08□□□□□ -0.32
FN1-226ENST00000496542 SMTNL1A8MU46 457 aa13.08□□□□□ -0.32
FN1-226ENST00000496542 DAPK3O43293 454 aa13.08□□□□□ -0.32
FN1-226ENST00000496542 PRAMEF11O60813 436 aa13.08□□□□□ -0.32
FN1-226ENST00000496542 GP1BAP07359 652 aa13.08□□□□□ -0.32
FN1-226ENST00000496542 ITPKBP27987 946 aa13.08□□□□□ -0.32
FN1-226ENST00000496542 PAPOLAP51003 745 aaKnown RBP13.08□□□□□ -0.32
FN1-226ENST00000496542 NDST2P52849 883 aa13.08□□□□□ -0.32
FN1-226ENST00000496542 ELP6Q0PNE2 266 aa13.08□□□□□ -0.32
FN1-226ENST00000496542 C1orf61Q13536 156 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms