RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 SP110Q9HB58 689 aa11.98□□□□□ -0.49
THBS3-208ENST00000496332 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.98□□□□□ -0.49
THBS3-208ENST00000496332 KLHL11Q9NVR0 708 aa11.98□□□□□ -0.49
THBS3-208ENST00000496332 DKK3Q9UBP4 350 aa11.98□□□□□ -0.49
THBS3-208ENST00000496332 NENFQ9UMX5 172 aa11.98□□□□□ -0.49
THBS3-208ENST00000496332 POM121BA6NF01 834 aa11.97□□□□□ -0.49
THBS3-208ENST00000496332 MYO1FO00160 1098 aa11.97□□□□□ -0.49
THBS3-208ENST00000496332 ENC1O14682 589 aa11.97□□□□□ -0.49
THBS3-208ENST00000496332 FPGTO14772 594 aa11.97□□□□□ -0.49
THBS3-208ENST00000496332 BUB1BO60566 1050 aaPredicted RBP11.97□□□□□ -0.49
THBS3-208ENST00000496332 MMP20O60882 483 aa11.97□□□□□ -0.49
THBS3-208ENST00000496332 AMPD1P23109 780 aa11.97□□□□□ -0.49
THBS3-208ENST00000496332 SSR1P43307 286 aaKnown RBP11.97□□□□□ -0.49
THBS3-208ENST00000496332 CSNK1DP48730 415 aa11.97□□□□□ -0.49
THBS3-208ENST00000496332 IL10RBQ08334 325 aa11.97□□□□□ -0.49
THBS3-208ENST00000496332 TRIM14Q14142 442 aa11.97□□□□□ -0.49
THBS3-208ENST00000496332 GRM3Q14832 879 aa11.97□□□□□ -0.49
THBS3-208ENST00000496332 KYAT3Q6YP21 454 aaKnown RBP11.97□□□□□ -0.49
THBS3-208ENST00000496332 PTAR1Q7Z6K3 402 aaPredicted RBP11.97□□□□□ -0.49
THBS3-208ENST00000496332 SRLQ86TD4 932 aa11.97□□□□□ -0.49
THBS3-208ENST00000496332 DCP2Q8IU60 420 aaKnown RBP11.97□□□□□ -0.49
THBS3-208ENST00000496332 TP53INP2Q8IXH6 220 aa11.97□□□□□ -0.49
THBS3-208ENST00000496332 SLC22A18ASQ8N1D0 253 aa11.97□□□□□ -0.49
THBS3-208ENST00000496332 LZTR1Q8N653 840 aa11.97□□□□□ -0.49
THBS3-208ENST00000496332 TSEN2Q8NCE0 465 aaKnown RBP11.97□□□□□ -0.49
THBS3-208ENST00000496332 RNF214Q8ND24 703 aa11.97□□□□□ -0.49
THBS3-208ENST00000496332 OR8K1Q8NGG5 319 aa11.97□□□□□ -0.49
THBS3-208ENST00000496332 HCAR2Q8TDS4 363 aa11.97□□□□□ -0.49
THBS3-208ENST00000496332 TEKT4Q8WW24 435 aa11.97□□□□□ -0.49
THBS3-208ENST00000496332 ASB12Q8WXK4 309 aa11.97□□□□□ -0.49
THBS3-208ENST00000496332 CSPG4P5Q96PW8 444 aa11.97□□□□□ -0.49
THBS3-208ENST00000496332 KLF6Q99612 283 aaPredicted RBP11.97□□□□□ -0.49
THBS3-208ENST00000496332 DNAJC7Q99615 494 aa11.97□□□□□ -0.49
THBS3-208ENST00000496332 SUV39H2Q9H5I1 410 aa11.97□□□□□ -0.49
THBS3-208ENST00000496332 ETNK2Q9NVF9 386 aa11.97□□□□□ -0.49
THBS3-208ENST00000496332 IPO11Q9UI26 975 aaKnown RBP11.97□□□□□ -0.49
THBS3-208ENST00000496332 CABIN1Q9Y6J0 2220 aa11.96□□□□□ -0.49
THBS3-208ENST00000496332 MAP1BP46821 2468 aaKnown RBP11.96□□□□□ -0.49
THBS3-208ENST00000496332 XPAP23025 273 aaPredicted RBP11.96□□□□□ -0.49
THBS3-208ENST00000496332 RABIFP47224 123 aa11.96□□□□□ -0.49
THBS3-208ENST00000496332 RGRP47804 291 aa11.96□□□□□ -0.49
THBS3-208ENST00000496332 SUOXP51687 545 aa11.96□□□□□ -0.49
THBS3-208ENST00000496332 SLC25A11Q02978 314 aaKnown RBP11.96□□□□□ -0.49
THBS3-208ENST00000496332 DNAJC3Q13217 504 aa11.96□□□□□ -0.49
THBS3-208ENST00000496332 RFTN1Q14699 578 aaPredicted RBP11.96□□□□□ -0.49
THBS3-208ENST00000496332 SLC18A3Q16572 532 aa11.96□□□□□ -0.49
THBS3-208ENST00000496332 ZNF542PQ5EBM4 170 aa11.96□□□□□ -0.49
THBS3-208ENST00000496332 CFAP58Q5T655 872 aa11.96□□□□□ -0.49
THBS3-208ENST00000496332 TMCO3Q6UWJ1 677 aa11.96□□□□□ -0.49
THBS3-208ENST00000496332 CCNI2Q6ZMN8 369 aaPredicted RBP11.96□□□□□ -0.49
THBS3-208ENST00000496332 TMPRSS7Q7RTY8 843 aa11.96□□□□□ -0.49
THBS3-208ENST00000496332 CAMK1DQ8IU85 385 aa11.96□□□□□ -0.49
THBS3-208ENST00000496332 VSTM4Q8IW00 320 aa11.96□□□□□ -0.49
THBS3-208ENST00000496332 SLC25A45Q8N413 288 aa11.96□□□□□ -0.49
THBS3-208ENST00000496332 KDF1Q8NAX2 398 aaPredicted RBP11.96□□□□□ -0.49
THBS3-208ENST00000496332 ZNF564Q8TBZ8 553 aaPredicted RBP11.96□□□□□ -0.49
THBS3-208ENST00000496332 CXorf40AQ8TE69 158 aa11.96□□□□□ -0.49
THBS3-208ENST00000496332 ZNF641Q96N77 438 aaPredicted RBP11.96□□□□□ -0.49
THBS3-208ENST00000496332 TUBGCP5Q96RT8 1024 aa11.96□□□□□ -0.49
THBS3-208ENST00000496332 WRAP53Q9BUR4 548 aaKnown RBP11.96□□□□□ -0.49
THBS3-208ENST00000496332 CINPQ9BW66 212 aaPredicted RBP11.96□□□□□ -0.49
THBS3-208ENST00000496332 CAAP1Q9H8G2 361 aa11.96□□□□□ -0.49
THBS3-208ENST00000496332 PCDH18Q9HCL0 1135 aa11.96□□□□□ -0.49
THBS3-208ENST00000496332 ZNHIT6Q9NWK9 470 aaKnown RBP11.96□□□□□ -0.49
THBS3-208ENST00000496332 UCKL1Q9NWZ5 548 aa11.96□□□□□ -0.49
THBS3-208ENST00000496332 CTTNBP2NLQ9P2B4 639 aa11.96□□□□□ -0.49
THBS3-208ENST00000496332 KMT2BQ9UMN6 2715 aaPredicted RBP11.96□□□□□ -0.49
THBS3-208ENST00000496332 DOCK9Q9BZ29 2069 aa11.95□□□□□ -0.5
THBS3-208ENST00000496332 SPTY2D1-AS1A0A0U1RR47 76 aa11.95□□□□□ -0.5
THBS3-208ENST00000496332 TSPAN11A1L157 253 aa11.95□□□□□ -0.5
THBS3-208ENST00000496332 TMEM8BA6NDV4 472 aa11.95□□□□□ -0.5
THBS3-208ENST00000496332 TM7SF2O76062 418 aa11.95□□□□□ -0.5
THBS3-208ENST00000496332 TPM1P09493 284 aa11.95□□□□□ -0.5
THBS3-208ENST00000496332 H2AFZP0C0S5 128 aa11.95□□□□□ -0.5
THBS3-208ENST00000496332 DGKAP23743 735 aa11.95□□□□□ -0.5
THBS3-208ENST00000496332 CDH6P55285 790 aa11.95□□□□□ -0.5
THBS3-208ENST00000496332 NSUN2Q08J23 767 aaKnown RBP eCLIP11.95□□□□□ -0.5
THBS3-208ENST00000496332 SLC10A7Q0GE19 358 aa11.95□□□□□ -0.5
THBS3-208ENST00000496332 ELP6Q0PNE2 266 aa11.95□□□□□ -0.5
THBS3-208ENST00000496332 PDE1CQ14123 709 aaPredicted RBP11.95□□□□□ -0.5
THBS3-208ENST00000496332 FZD2Q14332 565 aa11.95□□□□□ -0.5
THBS3-208ENST00000496332 KRT81Q14533 505 aa11.95□□□□□ -0.5
THBS3-208ENST00000496332 LBRQ14739 615 aaKnown RBP11.95□□□□□ -0.5
THBS3-208ENST00000496332 HADHQ16836 314 aaKnown RBP11.95□□□□□ -0.5
THBS3-208ENST00000496332 UGP2Q16851 508 aa11.95□□□□□ -0.5
THBS3-208ENST00000496332 TSR1Q2NL82 804 aaKnown RBP11.95□□□□□ -0.5
THBS3-208ENST00000496332 ASTE1Q2TB18 679 aaPredicted RBP11.95□□□□□ -0.5
THBS3-208ENST00000496332 TMEM52BQ4KMG9 183 aa11.95□□□□□ -0.5
THBS3-208ENST00000496332 BRAT1Q6PJG6 821 aa11.95□□□□□ -0.5
THBS3-208ENST00000496332 DHRS13Q6UX07 377 aa11.95□□□□□ -0.5
THBS3-208ENST00000496332 KDM7AQ6ZMT4 941 aa11.95□□□□□ -0.5
THBS3-208ENST00000496332 H2AFVQ71UI9 128 aa11.95□□□□□ -0.5
THBS3-208ENST00000496332 ZSWIM9Q86XI8 627 aa11.95□□□□□ -0.5
THBS3-208ENST00000496332 DENND6BQ8NEG7 585 aa11.95□□□□□ -0.5
THBS3-208ENST00000496332 CTNNBL1Q8WYA6 563 aaPredicted RBP11.95□□□□□ -0.5
THBS3-208ENST00000496332 TSC1Q92574 1164 aa11.95□□□□□ -0.5
THBS3-208ENST00000496332 CENPTQ96BT3 561 aa11.95□□□□□ -0.5
THBS3-208ENST00000496332 IFT43Q96FT9 208 aa11.95□□□□□ -0.5
THBS3-208ENST00000496332 ZNF599Q96NL3 588 aa11.95□□□□□ -0.5
THBS3-208ENST00000496332 PACSIN1Q9BY11 444 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms