RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 GRAP2O75791 330 aa13.63□□□□□ -0.23
COL1A1-209ENST00000495677 TM7SF2O76062 418 aa13.63□□□□□ -0.23
COL1A1-209ENST00000495677 ENDOD1O94919 500 aa13.63□□□□□ -0.23
COL1A1-209ENST00000495677 KRT5P13647 590 aa13.63□□□□□ -0.23
COL1A1-209ENST00000495677 CTSEP14091 401 aa13.63□□□□□ -0.23
COL1A1-209ENST00000495677 ITIH1P19827 911 aa13.63□□□□□ -0.23
COL1A1-209ENST00000495677 CASRP41180 1078 aa13.63□□□□□ -0.23
COL1A1-209ENST00000495677 SNX16P57768 344 aa13.63□□□□□ -0.23
COL1A1-209ENST00000495677 SLC6A3Q01959 620 aa13.63□□□□□ -0.23
COL1A1-209ENST00000495677 OTUD1Q5VV17 481 aaPredicted RBP13.63□□□□□ -0.23
COL1A1-209ENST00000495677 ZFAND4Q86XD8 727 aa13.63□□□□□ -0.23
COL1A1-209ENST00000495677 KYQ8NBH2 561 aa13.63□□□□□ -0.23
COL1A1-209ENST00000495677 TP53I13Q8NBR0 393 aaPredicted RBP13.63□□□□□ -0.23
COL1A1-209ENST00000495677 USP7Q93009 1102 aa13.63□□□□□ -0.23
COL1A1-209ENST00000495677 FAM81BQ96LP2 452 aa13.63□□□□□ -0.23
COL1A1-209ENST00000495677 OSBPL1AQ9BXW6 950 aa13.63□□□□□ -0.23
COL1A1-209ENST00000495677 RETREG1Q9H6L5 497 aa13.63□□□□□ -0.23
COL1A1-209ENST00000495677 SYNDIG1Q9H7V2 258 aa13.63□□□□□ -0.23
COL1A1-209ENST00000495677 MPP6Q9NZW5 540 aa13.63□□□□□ -0.23
COL1A1-209ENST00000495677 GGT7Q9UJ14 662 aa13.63□□□□□ -0.23
COL1A1-209ENST00000495677 CACNA1DQ01668 2161 aa13.63□□□□□ -0.23
COL1A1-209ENST00000495677 RASGRP1O95267 797 aa13.62□□□□□ -0.23
COL1A1-209ENST00000495677 POP4O95707 220 aaKnown RBP13.62□□□□□ -0.23
COL1A1-209ENST00000495677 CELA2BP08218 269 aaPredicted RBP13.62□□□□□ -0.23
COL1A1-209ENST00000495677 ETV5P41161 510 aa13.62□□□□□ -0.23
COL1A1-209ENST00000495677 DNA2P51530 1060 aa13.62□□□□□ -0.23
COL1A1-209ENST00000495677 PNOCQ13519 176 aa13.62□□□□□ -0.23
COL1A1-209ENST00000495677 TMEM164Q5U3C3 297 aa13.62□□□□□ -0.23
COL1A1-209ENST00000495677 BORAQ6PGQ7 559 aa13.62□□□□□ -0.23
COL1A1-209ENST00000495677 FAM183BPQ6ZVS7 135 aa13.62□□□□□ -0.23
COL1A1-209ENST00000495677 VASH2Q86V25 355 aa13.62□□□□□ -0.23
COL1A1-209ENST00000495677 ZDHHC17Q8IUH5 632 aa13.62□□□□□ -0.23
COL1A1-209ENST00000495677 SLITRK4Q8IW52 837 aa13.62□□□□□ -0.23
COL1A1-209ENST00000495677 C1orf131Q8NDD1 294 aaKnown RBP13.62□□□□□ -0.23
COL1A1-209ENST00000495677 PCDH19Q8TAB3 1148 aa13.62□□□□□ -0.23
COL1A1-209ENST00000495677 DHTKD1Q96HY7 919 aaPredicted RBP13.62□□□□□ -0.23
COL1A1-209ENST00000495677 HAPLN3Q96S86 360 aa13.62□□□□□ -0.23
COL1A1-209ENST00000495677 CDH19Q9H159 772 aa13.62□□□□□ -0.23
COL1A1-209ENST00000495677 EPN3Q9H201 632 aa13.62□□□□□ -0.23
COL1A1-209ENST00000495677 GOLPH3LQ9H4A5 285 aa13.62□□□□□ -0.23
COL1A1-209ENST00000495677 ZDHHC6Q9H6R6 413 aa13.62□□□□□ -0.23
COL1A1-209ENST00000495677 ATP13A1Q9HD20 1204 aa13.62□□□□□ -0.23
COL1A1-209ENST00000495677 UBE2TQ9NPD8 197 aaPredicted RBP13.62□□□□□ -0.23
COL1A1-209ENST00000495677 MBNL1Q9NR56 388 aaKnown RBP13.62□□□□□ -0.23
COL1A1-209ENST00000495677 FOXJ2Q9P0K8 574 aa13.62□□□□□ -0.23
COL1A1-209ENST00000495677 PPARGC1AQ9UBK2 798 aaKnown RBP13.62□□□□□ -0.23
COL1A1-209ENST00000495677 GPR34Q9UPC5 381 aa13.62□□□□□ -0.23
COL1A1-209ENST00000495677 MAN2B2Q9Y2E5 1009 aa13.62□□□□□ -0.23
COL1A1-209ENST00000495677 SPTBN1Q01082 2364 aaKnown RBP13.62□□□□□ -0.23
COL1A1-209ENST00000495677 USP9XQ93008 2570 aaPredicted RBP13.61□□□□□ -0.23
COL1A1-209ENST00000495677 SPTAN1Q13813 2472 aaKnown RBP13.61□□□□□ -0.23
COL1A1-209ENST00000495677 GSRP00390 522 aa13.61□□□□□ -0.23
COL1A1-209ENST00000495677 ETFBP38117 255 aa13.61□□□□□ -0.23
COL1A1-209ENST00000495677 PPP1R2P41236 205 aa13.61□□□□□ -0.23
COL1A1-209ENST00000495677 MARSP56192 900 aaKnown RBP13.61□□□□□ -0.23
COL1A1-209ENST00000495677 GEMIN4P57678 1058 aaKnown RBP13.61□□□□□ -0.23
COL1A1-209ENST00000495677 SNRPD1P62314 119 aaKnown RBP13.61□□□□□ -0.23
COL1A1-209ENST00000495677 CYP4F2P78329 520 aa13.61□□□□□ -0.23
COL1A1-209ENST00000495677 GNA12Q03113 381 aa13.61□□□□□ -0.23
COL1A1-209ENST00000495677 AGERQ15109 404 aa13.61□□□□□ -0.23
COL1A1-209ENST00000495677 CCDC40Q4G0X9 1142 aa13.61□□□□□ -0.23
COL1A1-209ENST00000495677 TFAP2DQ7Z6R9 452 aa13.61□□□□□ -0.23
COL1A1-209ENST00000495677 TTC7BQ86TV6 843 aa13.61□□□□□ -0.23
COL1A1-209ENST00000495677 VPS36Q86VN1 386 aa13.61□□□□□ -0.23
COL1A1-209ENST00000495677 CCNJLQ8IV13 435 aa13.61□□□□□ -0.23
COL1A1-209ENST00000495677 TRIM59Q8IWR1 403 aa13.61□□□□□ -0.23
COL1A1-209ENST00000495677 OR2AP1Q8NGE2 309 aa13.61□□□□□ -0.23
COL1A1-209ENST00000495677 GPBAR1Q8TDU6 330 aa13.61□□□□□ -0.23
COL1A1-209ENST00000495677 CATSPER2Q96P56 530 aa13.61□□□□□ -0.23
COL1A1-209ENST00000495677 RBM15Q96T37 977 aaKnown RBP eCLIP13.61□□□□□ -0.23
COL1A1-209ENST00000495677 SPON2Q9BUD6 331 aa13.61□□□□□ -0.23
COL1A1-209ENST00000495677 SCAND2PQ9GZW5 306 aaPredicted RBP13.61□□□□□ -0.23
COL1A1-209ENST00000495677 ACP6Q9NPH0 428 aa13.61□□□□□ -0.23
COL1A1-209ENST00000495677 STAP1Q9ULZ2 295 aa13.61□□□□□ -0.23
COL1A1-209ENST00000495677 ITM2BQ9Y287 266 aa13.61□□□□□ -0.23
COL1A1-209ENST00000495677 FCF1Q9Y324 198 aaKnown RBP13.61□□□□□ -0.23
COL1A1-209ENST00000495677 DGKBQ9Y6T7 804 aa13.61□□□□□ -0.23
COL1A1-209ENST00000495677 BECN2A8MW95 431 aa13.6□□□□□ -0.23
COL1A1-209ENST00000495677 STMND1H3BQB6 276 aa13.6□□□□□ -0.23
COL1A1-209ENST00000495677 MMP20O60882 483 aa13.6□□□□□ -0.23
COL1A1-209ENST00000495677 HTR1BP28222 390 aa13.6□□□□□ -0.23
COL1A1-209ENST00000495677 SUOXP51687 545 aa13.6□□□□□ -0.23
COL1A1-209ENST00000495677 DEUP1Q05D60 604 aa13.6□□□□□ -0.23
COL1A1-209ENST00000495677 KCNAB2Q13303 367 aa13.6□□□□□ -0.23
COL1A1-209ENST00000495677 POLD3Q15054 466 aaPredicted RBP13.6□□□□□ -0.23
COL1A1-209ENST00000495677 CLPPQ16740 277 aaPredicted RBP13.6□□□□□ -0.23
COL1A1-209ENST00000495677 ALG11Q2TAA5 492 aa13.6□□□□□ -0.23
COL1A1-209ENST00000495677 KLHL40Q2TBA0 621 aa13.6□□□□□ -0.23
COL1A1-209ENST00000495677 MYLK3Q32MK0 819 aa13.6□□□□□ -0.23
COL1A1-209ENST00000495677 SLC25A52Q3SY17 297 aa13.6□□□□□ -0.23
COL1A1-209ENST00000495677 CERCAMQ5T4B2 595 aa13.6□□□□□ -0.23
COL1A1-209ENST00000495677 BNIPLQ7Z465 357 aa13.6□□□□□ -0.23
COL1A1-209ENST00000495677 PTRH1Q86Y79 214 aaKnown RBP13.6□□□□□ -0.23
COL1A1-209ENST00000495677 HID1Q8IV36 788 aa13.6□□□□□ -0.23
COL1A1-209ENST00000495677 FAM26EQ8N5C1 309 aa13.6□□□□□ -0.23
COL1A1-209ENST00000495677 ATL2Q8NHH9 583 aa13.6□□□□□ -0.23
COL1A1-209ENST00000495677 ARHGEF2Q92974 986 aaKnown RBP13.6□□□□□ -0.23
COL1A1-209ENST00000495677 NKD1Q969G9 470 aa13.6□□□□□ -0.23
COL1A1-209ENST00000495677 TSACCQ96A04 125 aaPredicted RBP13.6□□□□□ -0.23
COL1A1-209ENST00000495677 KLHL32Q96NJ5 620 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms