RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 KLF1Q13351 362 aaPredicted RBP19.64■□□□□ 0.73
HDAC4-212ENST00000495497 IHHQ14623 411 aa19.64■□□□□ 0.73
HDAC4-212ENST00000495497 SPDYCQ5MJ68 293 aa19.64■□□□□ 0.73
HDAC4-212ENST00000495497 ADAT2Q7Z6V5 191 aaKnown RBP19.64■□□□□ 0.73
HDAC4-212ENST00000495497 CADM4Q8NFZ8 388 aa19.64■□□□□ 0.73
HDAC4-212ENST00000495497 SNX19Q92543 992 aa19.64■□□□□ 0.73
HDAC4-212ENST00000495497 PIGKQ92643 395 aa19.64■□□□□ 0.73
HDAC4-212ENST00000495497 QKIQ96PU8 341 aaKnown RBP eCLIP19.64■□□□□ 0.73
HDAC4-212ENST00000495497 TUBGCP5Q96RT8 1024 aa19.64■□□□□ 0.73
HDAC4-212ENST00000495497 SEMA3CQ99985 751 aa19.64■□□□□ 0.73
HDAC4-212ENST00000495497 POLR1EQ9GZS1 481 aaKnown RBP19.64■□□□□ 0.73
HDAC4-212ENST00000495497 SMOC1Q9H4F8 434 aa19.64■□□□□ 0.73
HDAC4-212ENST00000495497 ATP13A3Q9H7F0 1226 aa19.64■□□□□ 0.73
HDAC4-212ENST00000495497 TMEM74BQ9NUR3 256 aa19.64■□□□□ 0.73
HDAC4-212ENST00000495497 GGT7Q9UJ14 662 aa19.64■□□□□ 0.73
HDAC4-212ENST00000495497 R3HDM2Q9Y2K5 976 aaKnown RBP19.64■□□□□ 0.73
HDAC4-212ENST00000495497 SHROOM3Q8TF72 1996 aa19.64■□□□□ 0.73
HDAC4-212ENST00000495497 NUMA1Q14980 2115 aa19.64■□□□□ 0.73
HDAC4-212ENST00000495497 BCLAF3A2AJT9 711 aaKnown RBP19.63■□□□□ 0.73
HDAC4-212ENST00000495497 GFRA3O60609 400 aa19.63■□□□□ 0.73
HDAC4-212ENST00000495497 PRKCGP05129 697 aa19.63■□□□□ 0.73
HDAC4-212ENST00000495497 RETP07949 1114 aa19.63■□□□□ 0.73
HDAC4-212ENST00000495497 SERPINA4P29622 427 aa19.63■□□□□ 0.73
HDAC4-212ENST00000495497 CXCR5P32302 372 aa19.63■□□□□ 0.73
HDAC4-212ENST00000495497 EIF3EP60228 445 aaKnown RBP19.63■□□□□ 0.73
HDAC4-212ENST00000495497 TRAF2Q12933 501 aa19.63■□□□□ 0.73
HDAC4-212ENST00000495497 GRM3Q14832 879 aa19.63■□□□□ 0.73
HDAC4-212ENST00000495497 KIAA0895LQ68EN5 471 aa19.63■□□□□ 0.73
HDAC4-212ENST00000495497 CYP2U1Q7Z449 544 aa19.63■□□□□ 0.73
HDAC4-212ENST00000495497 TTC7BQ86TV6 843 aa19.63■□□□□ 0.73
HDAC4-212ENST00000495497 RGL4Q8IZJ4 473 aa19.63■□□□□ 0.73
HDAC4-212ENST00000495497 ARRDC2Q8TBH0 407 aa19.63■□□□□ 0.73
HDAC4-212ENST00000495497 UBE2Q2Q8WVN8 375 aa19.63■□□□□ 0.73
HDAC4-212ENST00000495497 FOXJ1Q92949 421 aa19.63■□□□□ 0.73
HDAC4-212ENST00000495497 BIRC7Q96CA5 298 aa19.63■□□□□ 0.73
HDAC4-212ENST00000495497 LOXL4Q96JB6 756 aa19.63■□□□□ 0.73
HDAC4-212ENST00000495497 ZNF641Q96N77 438 aaPredicted RBP19.63■□□□□ 0.73
HDAC4-212ENST00000495497 AGAP3Q96P47 875 aa19.63■□□□□ 0.73
HDAC4-212ENST00000495497 HINFPQ9BQA5 517 aa19.63■□□□□ 0.73
HDAC4-212ENST00000495497 ITM2BQ9Y287 266 aa19.63■□□□□ 0.73
HDAC4-212ENST00000495497 FADS3Q9Y5Q0 445 aa19.63■□□□□ 0.73
HDAC4-212ENST00000495497 SLCO1B1Q9Y6L6 691 aa19.63■□□□□ 0.73
HDAC4-212ENST00000495497 GPR179Q6PRD1 2367 aa19.62■□□□□ 0.73
HDAC4-212ENST00000495497 SDK1Q7Z5N4 2213 aa19.62■□□□□ 0.73
HDAC4-212ENST00000495497 TRAFD1O14545 582 aaPredicted RBP19.62■□□□□ 0.73
HDAC4-212ENST00000495497 SPINT1O43278 529 aa19.62■□□□□ 0.73
HDAC4-212ENST00000495497 RNGTTO60942 597 aaKnown RBP19.62■□□□□ 0.73
HDAC4-212ENST00000495497 IGHV4-34P06331 123 aa19.62■□□□□ 0.73
HDAC4-212ENST00000495497 PTPN3P26045 913 aa19.62■□□□□ 0.73
HDAC4-212ENST00000495497 RBL1P28749 1068 aa19.62■□□□□ 0.73
HDAC4-212ENST00000495497 MAT2AP31153 395 aaKnown RBP19.62■□□□□ 0.73
HDAC4-212ENST00000495497 SEMG2Q02383 582 aa19.62■□□□□ 0.73
HDAC4-212ENST00000495497 WASHC5Q12768 1159 aa19.62■□□□□ 0.73
HDAC4-212ENST00000495497 SLC45A4Q5BKX6 768 aa19.62■□□□□ 0.73
HDAC4-212ENST00000495497 SLC13A5Q86YT5 568 aaPredicted RBP19.62■□□□□ 0.73
HDAC4-212ENST00000495497 C17orf53Q8N3J3 647 aaPredicted RBP19.62■□□□□ 0.73
HDAC4-212ENST00000495497 PDCD6IPQ8WUM4 868 aaKnown RBP19.62■□□□□ 0.73
HDAC4-212ENST00000495497 HTR3CQ8WXA8 447 aa19.62■□□□□ 0.73
HDAC4-212ENST00000495497 RUBCNQ92622 972 aa19.62■□□□□ 0.73
HDAC4-212ENST00000495497 KLK6Q92876 244 aa19.62■□□□□ 0.73
HDAC4-212ENST00000495497 MIR1-1HGQ9H1L0 117 aa19.62■□□□□ 0.73
HDAC4-212ENST00000495497 CARD9Q9H257 536 aa19.62■□□□□ 0.73
HDAC4-212ENST00000495497 EBF2Q9HAK2 575 aa19.62■□□□□ 0.73
HDAC4-212ENST00000495497 DKK3Q9UBP4 350 aa19.62■□□□□ 0.73
HDAC4-212ENST00000495497 AMACRQ9UHK6 382 aa19.62■□□□□ 0.73
HDAC4-212ENST00000495497 EIF2B4Q9UI10 523 aaKnown RBP19.62■□□□□ 0.73
HDAC4-212ENST00000495497 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.62■□□□□ 0.73
HDAC4-212ENST00000495497 THADAQ6YHU6 1953 aa19.62■□□□□ 0.73
HDAC4-212ENST00000495497 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.61■□□□□ 0.73
HDAC4-212ENST00000495497 TSPAN11A1L157 253 aa19.61■□□□□ 0.73
HDAC4-212ENST00000495497 GOLGA6L9A6NEM1 432 aa19.61■□□□□ 0.73
HDAC4-212ENST00000495497 HACD1B0YJ81 288 aa19.61■□□□□ 0.73
HDAC4-212ENST00000495497 KIF5CO60282 957 aa19.61■□□□□ 0.73
HDAC4-212ENST00000495497 PCDH8O95206 1070 aa19.61■□□□□ 0.73
HDAC4-212ENST00000495497 ATP1A1P05023 1023 aaKnown RBP19.61■□□□□ 0.73
HDAC4-212ENST00000495497 RBP3P10745 1247 aa19.61■□□□□ 0.73
HDAC4-212ENST00000495497 MPLP40238 635 aa19.61■□□□□ 0.73
HDAC4-212ENST00000495497 MAPK8P45983 427 aa19.61■□□□□ 0.73
HDAC4-212ENST00000495497 SPEM2Q0P670 501 aa19.61■□□□□ 0.73
HDAC4-212ENST00000495497 CCDC15Q0P6D6 951 aa19.61■□□□□ 0.73
HDAC4-212ENST00000495497 XRCC4Q13426 336 aa19.61■□□□□ 0.73
HDAC4-212ENST00000495497 TEX44Q53QW1 395 aa19.61■□□□□ 0.73
HDAC4-212ENST00000495497 WDR45BQ5MNZ6 344 aa19.61■□□□□ 0.73
HDAC4-212ENST00000495497 SYCP2LQ5T4T6 812 aa19.61■□□□□ 0.73
HDAC4-212ENST00000495497 CFAP58Q5T655 872 aa19.61■□□□□ 0.73
HDAC4-212ENST00000495497 ALG1LQ6GMV1 187 aa19.61■□□□□ 0.73
HDAC4-212ENST00000495497 ALYREFQ86V81 257 aaKnown RBP19.61■□□□□ 0.73
HDAC4-212ENST00000495497 PAF1Q8N7H5 531 aa19.61■□□□□ 0.73
HDAC4-212ENST00000495497 PARD6AQ9NPB6 346 aa19.61■□□□□ 0.73
HDAC4-212ENST00000495497 PILRBQ9UKJ0 227 aa19.61■□□□□ 0.73
HDAC4-212ENST00000495497 ZFR2Q9UPR6 939 aaKnown RBP19.61■□□□□ 0.73
HDAC4-212ENST00000495497 JRKLQ9Y4A0 524 aa19.61■□□□□ 0.73
HDAC4-212ENST00000495497 A0A1W2PQU0 124 aa19.6■□□□□ 0.73
HDAC4-212ENST00000495497 PATE3B3GLJ2 98 aa19.6■□□□□ 0.73
HDAC4-212ENST00000495497 C10orf142B7Z368 130 aa19.6■□□□□ 0.73
HDAC4-212ENST00000495497 F5H423 210 aaPredicted RBP19.6■□□□□ 0.73
HDAC4-212ENST00000495497 MMP2P08253 660 aa19.6■□□□□ 0.73
HDAC4-212ENST00000495497 CD86P42081 329 aa19.6■□□□□ 0.73
HDAC4-212ENST00000495497 UGP2Q16851 508 aa19.6■□□□□ 0.73
HDAC4-212ENST00000495497 SEL1L3Q68CR1 1132 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms