RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 MAGEB18Q96M61 343 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 RANBP9Q96S59 729 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 PLCD4Q9BRC7 762 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 WDR83Q9BRX9 315 aaKnown RBP10.38□□□□□ -0.75
HDAC3-214ENST00000495485 SPON2Q9BUD6 331 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 KIFC1Q9BW19 673 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 NOL6Q9H6R4 1146 aaKnown RBP10.38□□□□□ -0.75
HDAC3-214ENST00000495485 KCNK12Q9HB15 430 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 SLC2A4RGQ9NR83 387 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 UBP1Q9NZI7 540 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 TBC1D14Q9P2M4 693 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 ZNF212Q9UDV6 495 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 DUSP12Q9UNI6 340 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 TECTAO75443 2155 aa10.38□□□□□ -0.75
HDAC3-214ENST00000495485 TRIM49D1C9J1S8 452 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 J3KR12 359 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 DCXO43602 365 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 TIMM44O43615 452 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 LUC7L3O95232 432 aaKnown RBP10.37□□□□□ -0.75
HDAC3-214ENST00000495485 FGF1P05230 155 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 VIMP08670 466 aaKnown RBP10.37□□□□□ -0.75
HDAC3-214ENST00000495485 SRFP11831 508 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 NEFHP12036 1026 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 CD86P42081 329 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 SERPINH1P50454 418 aaKnown RBP10.37□□□□□ -0.75
HDAC3-214ENST00000495485 WNT3AP56704 352 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 PDE1BQ01064 536 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 SLC20A2Q08357 652 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 SLC10A7Q0GE19 358 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 CDH18Q13634 790 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 THOC5Q13769 683 aaKnown RBP10.37□□□□□ -0.75
HDAC3-214ENST00000495485 INO80DQ53TQ3 878 aaPredicted RBP10.37□□□□□ -0.75
HDAC3-214ENST00000495485 FAM78AQ5JUQ0 283 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 ARTNQ5T4W7 220 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 GKAP1Q5VSY0 366 aaPredicted RBP10.37□□□□□ -0.75
HDAC3-214ENST00000495485 RNF219Q5W0B1 726 aaPredicted RBP10.37□□□□□ -0.75
HDAC3-214ENST00000495485 TTC19Q6DKK2 380 aaPredicted RBP10.37□□□□□ -0.75
HDAC3-214ENST00000495485 RETSATQ6NUM9 610 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 RANBP10Q6VN20 620 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 KCNMB4Q86W47 210 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 FAM217AQ8IXS0 508 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 YAF2Q8IY57 180 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 CFAP52Q8N1V2 620 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 CARNMT1Q8N4J0 409 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 SPATA22Q8NHS9 363 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 MDM1Q8TC05 714 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 DDI1Q8WTU0 396 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 CKAP2Q8WWK9 683 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 SREK1Q8WXA9 508 aaKnown RBP10.37□□□□□ -0.75
HDAC3-214ENST00000495485 PEX13Q92968 403 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 ACDQ96AP0 544 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 OXNAD1Q96HP4 312 aaPredicted RBP10.37□□□□□ -0.75
HDAC3-214ENST00000495485 APOPT1Q96IL0 206 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 FEM1CQ96JP0 617 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 CCT8L2Q96SF2 557 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 PAIP2Q9BPZ3 127 aaKnown RBP10.37□□□□□ -0.75
HDAC3-214ENST00000495485 FAM167BQ9BTA0 163 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 C2orf49Q9BVC5 232 aaPredicted RBP10.37□□□□□ -0.75
HDAC3-214ENST00000495485 SLC46A2Q9BY10 475 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 C20orf96Q9NUD7 363 aaPredicted RBP10.37□□□□□ -0.75
HDAC3-214ENST00000495485 MKS1Q9NXB0 559 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 SMPD4Q9NXE4 827 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 LIMD1Q9UGP4 676 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 GGA2Q9UJY4 613 aa10.37□□□□□ -0.75
HDAC3-214ENST00000495485 CHD5Q8TDI0 1954 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 TNFRSF10AO00220 468 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 CBX4O00257 560 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 PFDN6O15212 129 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 TSPAN3O60637 253 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 USP12O75317 370 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 PAPSS2O95340 614 aaPredicted RBP10.36□□□□□ -0.75
HDAC3-214ENST00000495485 PEX11BO96011 259 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 MT-CYBP00156 380 aaPredicted RBP10.36□□□□□ -0.75
HDAC3-214ENST00000495485 KLKB1P03952 638 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 ADRA1AP35348 466 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 MAPK8P45983 427 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 RPS24P62847 133 aaKnown RBP10.36□□□□□ -0.75
HDAC3-214ENST00000495485 CYP4F8P98187 520 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 SLC18A2Q05940 514 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 CDK18Q07002 472 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 NSUN2Q08J23 767 aaKnown RBP eCLIP10.36□□□□□ -0.75
HDAC3-214ENST00000495485 NIPAL4Q0D2K0 466 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 EFTUD2Q15029 972 aaKnown RBP eCLIP10.36□□□□□ -0.754e-7■■■■■ 34.8
HDAC3-214ENST00000495485 PDGFRLQ15198 375 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 DBN1Q16643 649 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 CERCAMQ5T4B2 595 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 STXBP5Q5T5C0 1151 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 PACS1Q6VY07 963 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 Q6ZNB5 142 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 PRPF39Q86UA1 669 aaKnown RBP10.36□□□□□ -0.75
HDAC3-214ENST00000495485 CIR1Q86X95 450 aaPredicted RBP10.36□□□□□ -0.75
HDAC3-214ENST00000495485 MFN1Q8IWA4 741 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 AGGF1Q8N302 714 aaeCLIP10.36□□□□□ -0.75
HDAC3-214ENST00000495485 BANPQ8N9N5 519 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 MGARPQ8TDB4 240 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 BPIFB1Q8TDL5 484 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 LRRC8CQ8TDW0 803 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 ING5Q8WYH8 240 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 SHDQ96IW2 340 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 MRGPRX2Q96LB1 330 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms