RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 PCBP4P57723 403 aaKnown RBP11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 HADHQ16836 314 aaKnown RBP11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 C3orf38Q5JPI3 329 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 TPRG1LQ5T0D9 272 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 FBXL22Q6P050 247 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 SYT10Q6XYQ8 523 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 GCNT7Q6ZNI0 430 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 SLFN11Q7Z7L1 901 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 TRIM69Q86WT6 500 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 OXR1Q8N573 874 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 LRRC57Q8N9N7 239 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 TMEM145Q8NBT3 493 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 CHST14Q8NCH0 376 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 OR8D1Q8WZ84 308 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 DDX50Q9BQ39 737 aaKnown RBP11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 POPDC2Q9HBU9 364 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 TFR2Q9UP52 801 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 ZFR2Q9UPR6 939 aaKnown RBP11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 SATB2Q9UPW6 733 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 DUSP10Q9Y6W6 482 aa11.97□□□□□ -0.49
CSNK1E-212ENST00000494610 A0A0U1RQJ8 604 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 KCNU1A8MYU2 1149 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 F5H5T6 163 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 PRAMEF26H0Y7S4 382 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 SMAD6O43541 496 aaKnown RBP11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 PSTPIP1O43586 416 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 GRAP2O75791 330 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 ENDOD1O94919 500 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 IGLV3-25P01717 112 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 CKMT1AP12532 417 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 TCP1P17987 556 aaKnown RBP11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 TMPRSS3P57727 454 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 YWHAZP63104 245 aaKnown RBP11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 E2F1Q01094 437 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 MESDQ14696 234 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 ZNF284Q2VY69 593 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 SETMARQ53H47 684 aaPredicted RBP11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 C2CD6Q53TS8 623 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 FOXR1Q6PIV2 292 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 IQCHQ86VS3 1027 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 DNAAF5Q86Y56 855 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 CACTIN-AS1Q8N1I8 211 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 ZNF557Q8N988 423 aaPredicted RBP11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 KCNE4Q8WWG9 221 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 ATXN7L3BQ96GX2 97 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 FEM1AQ9BSK4 669 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 CNPY3Q9BT09 278 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 IRX2Q9BZI1 471 aaPredicted RBP11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 ANLNQ9NQW6 1124 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 KLHL11Q9NVR0 708 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 KLF15Q9UIH9 416 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 SALL4Q9UJQ4 1053 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 TMEM59LQ9UK28 342 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 VANGL2Q9ULK5 521 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 DMTF1Q9Y222 760 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 HYOU1Q9Y4L1 999 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 OR51B4Q9Y5P0 310 aa11.96□□□□□ -0.49
CSNK1E-212ENST00000494610 POM121BA6NF01 834 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 C2CD4BA6NLJ0 364 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 K7ESM1 405 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 KPNA3O00505 521 aaPredicted RBP11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 MCF2LO15068 1137 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 RAD51BO15315 384 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 ATP9BO43861 1147 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 CNTN5O94779 1100 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 APOEP02649 317 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 KRT7P08729 469 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 NOS2P35228 1153 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 PCK1P35558 622 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 NNMTP40261 264 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 CETN2P41208 172 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 SRSF6Q13247 344 aaKnown RBP11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 EIF4EBP2Q13542 120 aaPredicted RBP11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 FGL2Q14314 439 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 RPS6KA1Q15418 735 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 CDKN3Q16667 212 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 ODF2Q5BJF6 829 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 MEI1Q5TIA1 1274 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 LRRC38Q5VT99 294 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 GUSBP11Q6P575 273 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 LINGO4Q6UY18 593 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 Q6ZSR6 202 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 STRADAQ7RTN6 431 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 POLNQ7Z5Q5 900 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 RHOT1Q8IXI2 618 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 IFI44Q8TCB0 444 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 ZNF592Q92610 1267 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 PRR11Q96HE9 360 aaPredicted RBP11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 BTN2A3PQ96KV6 586 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 BMFQ96LC9 184 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 ZNF578Q96N58 590 aaPredicted RBP11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 SLC2A13Q96QE2 648 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 PSMB7Q99436 277 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 TRIM4Q9C037 500 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 TNKS2Q9H2K2 1166 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 TMPRSS4Q9NRS4 437 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 WDR70Q9NW82 654 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 DNAJC28Q9NX36 388 aa11.95□□□□□ -0.5
CSNK1E-212ENST00000494610 ACTL7AQ9Y615 435 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms