RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 CARD6Q9BX69 1037 aa13.38□□□□□ -0.27
ERCC3-209ENST00000494464 KLC2Q9H0B6 622 aa13.38□□□□□ -0.27
ERCC3-209ENST00000494464 THAP2Q9H0W7 228 aa13.38□□□□□ -0.27
ERCC3-209ENST00000494464 ZFR2Q9UPR6 939 aaKnown RBP13.38□□□□□ -0.27
ERCC3-209ENST00000494464 MFHAS1Q9Y4C4 1052 aa13.38□□□□□ -0.27
ERCC3-209ENST00000494464 FADS3Q9Y5Q0 445 aa13.38□□□□□ -0.27
ERCC3-209ENST00000494464 DUSP10Q9Y6W6 482 aa13.38□□□□□ -0.27
ERCC3-209ENST00000494464 ARHGAP42A6NI28 874 aa13.37□□□□□ -0.27
ERCC3-209ENST00000494464 KRIT1O00522 736 aa13.37□□□□□ -0.27
ERCC3-209ENST00000494464 ATP1A1P05023 1023 aaKnown RBP13.37□□□□□ -0.27
ERCC3-209ENST00000494464 CYP1A2P05177 515 aa13.37□□□□□ -0.27
ERCC3-209ENST00000494464 PRLRP16471 622 aa13.37□□□□□ -0.27
ERCC3-209ENST00000494464 HNRNPA2B1P22626 353 aaKnown RBP13.37□□□□□ -0.27
ERCC3-209ENST00000494464 RHOAP61586 193 aa13.37□□□□□ -0.27
ERCC3-209ENST00000494464 RPS21P63220 83 aaKnown RBP13.37□□□□□ -0.27
ERCC3-209ENST00000494464 RAD51Q06609 339 aa13.37□□□□□ -0.27
ERCC3-209ENST00000494464 STAT4Q14765 748 aa13.37□□□□□ -0.27
ERCC3-209ENST00000494464 IFI16Q16666 785 aaKnown RBP13.37□□□□□ -0.27
ERCC3-209ENST00000494464 MYLK3Q32MK0 819 aa13.37□□□□□ -0.27
ERCC3-209ENST00000494464 PPP6R3Q5H9R7 873 aaPredicted RBP13.37□□□□□ -0.27
ERCC3-209ENST00000494464 AFMIDQ63HM1 303 aa13.37□□□□□ -0.27
ERCC3-209ENST00000494464 FBXL19Q6PCT2 694 aa13.37□□□□□ -0.27
ERCC3-209ENST00000494464 LEKR1Q6ZMV7 388 aa13.37□□□□□ -0.27
ERCC3-209ENST00000494464 FAM174AQ8TBP5 190 aa13.37□□□□□ -0.27
ERCC3-209ENST00000494464 ARHGEF26Q96DR7 871 aa13.37□□□□□ -0.27
ERCC3-209ENST00000494464 ZWILCHQ9H900 591 aa13.37□□□□□ -0.27
ERCC3-209ENST00000494464 LHX3Q9UBR4 397 aa13.37□□□□□ -0.27
ERCC3-209ENST00000494464 UBA2Q9UBT2 640 aaPredicted RBP13.37□□□□□ -0.27
ERCC3-209ENST00000494464 ANAPC7Q9UJX3 599 aa13.37□□□□□ -0.27
ERCC3-209ENST00000494464 BTBD3Q9Y2F9 522 aa13.37□□□□□ -0.27
ERCC3-209ENST00000494464 TRPM6Q9BX84 2022 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 C16orf96A6NNT2 1141 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 KCNK3O14649 394 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 PRAMEF11O60813 436 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 PCDH8O95206 1070 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 UGT2B4P06133 528 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 H2AFZP0C0S5 128 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 FTH1P19P0C7X4 201 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 ERCC2P18074 760 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 IL1R2P27930 398 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 EPHA8P29322 1005 aaPredicted RBP13.36□□□□□ -0.27
ERCC3-209ENST00000494464 AKT2P31751 481 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 GKP32189 559 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 ABL2P42684 1182 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 RXRGP48443 463 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 ARRB1P49407 418 aaPredicted RBP13.36□□□□□ -0.27
ERCC3-209ENST00000494464 DPYSQ14117 519 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 GRM3Q14832 879 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 SHBQ15464 509 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 BOLA3Q53S33 107 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 ATXN7L2Q5T6C5 722 aaPredicted RBP13.36□□□□□ -0.27
ERCC3-209ENST00000494464 SEL1L3Q68CR1 1132 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 H2AFVQ71UI9 128 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 RAB44Q7Z6P3 723 aaPredicted RBP13.36□□□□□ -0.27
ERCC3-209ENST00000494464 SPATS2Q86XZ4 545 aaKnown RBP13.36□□□□□ -0.27
ERCC3-209ENST00000494464 ARHGAP12Q8IWW6 846 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 LZTR1Q8N653 840 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 NPWQ8N729 165 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 RHBDD1Q8TEB9 315 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 SAP25Q8TEE9 199 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 TEKT4Q8WW24 435 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 ADAMTS14Q8WXS8 1223 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 CALR3Q96L12 384 aaKnown RBP13.36□□□□□ -0.27
ERCC3-209ENST00000494464 NUP85Q9BW27 656 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 PACSIN1Q9BY11 444 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 SLC39A8Q9C0K1 460 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 DKK3Q9UBP4 350 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 IP6K2Q9UHH9 426 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 SALL4Q9UJQ4 1053 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 APOBEC2Q9Y235 224 aaKnown RBP13.36□□□□□ -0.27
ERCC3-209ENST00000494464 NEUROG3Q9Y4Z2 214 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 SAR1BQ9Y6B6 198 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 SPEGQ15772 3267 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 CABIN1Q9Y6J0 2220 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 ACACBO00763 2458 aa13.36□□□□□ -0.27
ERCC3-209ENST00000494464 KNL1Q8NG31 2342 aa13.35□□□□□ -0.27
ERCC3-209ENST00000494464 H3BRJ5 948 aa13.35□□□□□ -0.27
ERCC3-209ENST00000494464 AREL1O15033 823 aa13.35□□□□□ -0.27
ERCC3-209ENST00000494464 SLC31A1O15431 190 aa13.35□□□□□ -0.27
ERCC3-209ENST00000494464 SPINT1O43278 529 aa13.35□□□□□ -0.27
ERCC3-209ENST00000494464 DAPK3O43293 454 aa13.35□□□□□ -0.27
ERCC3-209ENST00000494464 TSPAN6O43657 245 aa13.35□□□□□ -0.27
ERCC3-209ENST00000494464 HYAL3O43820 417 aaPredicted RBP13.35□□□□□ -0.27
ERCC3-209ENST00000494464 DKK1O94907 266 aa13.35□□□□□ -0.27
ERCC3-209ENST00000494464 TOP3BO95985 862 aaKnown RBP13.35□□□□□ -0.27
ERCC3-209ENST00000494464 TMEM253P0C7T8 217 aa13.35□□□□□ -0.27
ERCC3-209ENST00000494464 TCF4P15884 667 aa13.35□□□□□ -0.27
ERCC3-209ENST00000494464 IL9RQ01113 521 aa13.35□□□□□ -0.27
ERCC3-209ENST00000494464 SLC25A11Q02978 314 aaKnown RBP13.35□□□□□ -0.27
ERCC3-209ENST00000494464 CKAP4Q07065 602 aaKnown RBP13.35□□□□□ -0.27
ERCC3-209ENST00000494464 CYTH1Q15438 398 aa13.35□□□□□ -0.27
ERCC3-209ENST00000494464 GDPD4Q6W3E5 623 aa13.35□□□□□ -0.27
ERCC3-209ENST00000494464 GCNT7Q6ZNI0 430 aa13.35□□□□□ -0.27
ERCC3-209ENST00000494464 ABI3BPQ7Z7G0 1075 aa13.35□□□□□ -0.27
ERCC3-209ENST00000494464 LRRN4CLQ8ND94 238 aa13.35□□□□□ -0.27
ERCC3-209ENST00000494464 ASB12Q8WXK4 309 aa13.35□□□□□ -0.27
ERCC3-209ENST00000494464 CELF6Q96J87 481 aaKnown RBP13.35□□□□□ -0.27
ERCC3-209ENST00000494464 FEM1CQ96JP0 617 aa13.35□□□□□ -0.27
ERCC3-209ENST00000494464 KLHL32Q96NJ5 620 aa13.35□□□□□ -0.27
ERCC3-209ENST00000494464 SCNM1Q9BWG6 230 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms